RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C NOP13P53883 403 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
VPS4YPR173C PRP38Q00723 242 aaPredicted RBP5.89□□□□□ -1.47
VPS4YPR173C TOF2Q02208 771 aa5.89□□□□□ -1.47
VPS4YPR173C RMI1Q02685 241 aa5.89□□□□□ -1.47
VPS4YPR173C INA17Q02888 182 aa5.89□□□□□ -1.47
VPS4YPR173C GAS3Q03655 524 aa5.89□□□□□ -1.47
VPS4YPR173C CDD1Q06549 142 aa5.89□□□□□ -1.47
VPS4YPR173C YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
VPS4YPR173C UAF30Q08747 228 aa5.89□□□□□ -1.47
VPS4YPR173C BUD7Q08754 746 aa5.89□□□□□ -1.47
VPS4YPR173C YPL191CQ08930 360 aa5.89□□□□□ -1.47
VPS4YPR173C PIN2Q12057 282 aa5.89□□□□□ -1.47
VPS4YPR173C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47 RIP-Chip
VPS4YPR173C PFK27Q12471 397 aaPredicted RBP5.89□□□□□ -1.47
VPS4YPR173C YPL247CQ12523 523 aa5.89□□□□□ -1.47
VPS4YPR173C THP2O13539 261 aaKnown RBP5.88□□□□□ -1.47
VPS4YPR173C COX4P04037 155 aa5.88□□□□□ -1.47
VPS4YPR173C ERG20P08524 352 aaKnown RBP5.88□□□□□ -1.47
VPS4YPR173C WHI2P12611 486 aa5.88□□□□□ -1.47
VPS4YPR173C ABF1P14164 731 aa5.88□□□□□ -1.47
VPS4YPR173C STF2P16965 84 aa5.88□□□□□ -1.47
VPS4YPR173C MET16P18408 261 aaPredicted RBP5.88□□□□□ -1.47
VPS4YPR173C RPB4P20433 221 aaPredicted RBP5.88□□□□□ -1.47
VPS4YPR173C KGD1P20967 1014 aaKnown RBP5.88□□□□□ -1.47
VPS4YPR173C YCR016WP25617 290 aaKnown RBP5.88□□□□□ -1.47
VPS4YPR173C HSP30P25619 332 aa5.88□□□□□ -1.47
VPS4YPR173C HCS1P34243 683 aa5.88□□□□□ -1.47
VPS4YPR173C MRP21P38175 177 aa5.88□□□□□ -1.47
VPS4YPR173C SLX1P38324 304 aa5.88□□□□□ -1.47
VPS4YPR173C SWD1P39706 426 aa5.88□□□□□ -1.47
VPS4YPR173C GDH3P39708 457 aa5.88□□□□□ -1.47
VPS4YPR173C VAC8P39968 578 aa5.88□□□□□ -1.47
VPS4YPR173C FCY21P40039 528 aa5.88□□□□□ -1.47
VPS4YPR173C ATM1P40416 690 aa5.88□□□□□ -1.47
VPS4YPR173C YFL066CP43538 392 aa5.88□□□□□ -1.47
VPS4YPR173C GUF1P46943 645 aa5.88□□□□□ -1.47
VPS4YPR173C RPS7BP48164 190 aaKnown RBP5.88□□□□□ -1.47
VPS4YPR173C MSE1P48525 536 aa5.88□□□□□ -1.47
VPS4YPR173C KEL2P50090 882 aa5.88□□□□□ -1.47
VPS4YPR173C RAI1P53063 387 aaKnown RBP5.88□□□□□ -1.47
VPS4YPR173C TWF1P53250 332 aa5.88□□□□□ -1.47
VPS4YPR173C YNR068CP53754 272 aa5.88□□□□□ -1.47
VPS4YPR173C COG5P53951 403 aa5.88□□□□□ -1.47
VPS4YPR173C SLG1P54867 378 aa5.88□□□□□ -1.47
VPS4YPR173C SPR6Q01684 191 aa5.88□□□□□ -1.47
VPS4YPR173C YPL107WQ02873 248 aa5.88□□□□□ -1.47
VPS4YPR173C ABZ2Q03266 374 aa5.88□□□□□ -1.47
VPS4YPR173C CWC21Q03375 135 aaKnown RBP5.88□□□□□ -1.47
VPS4YPR173C NHP10Q03435 203 aa5.88□□□□□ -1.47
VPS4YPR173C MUS81Q04149 632 aaPredicted RBP5.88□□□□□ -1.47
VPS4YPR173C RAD33Q04231 177 aa5.88□□□□□ -1.47
VPS4YPR173C YDR109CQ04585 715 aa5.88□□□□□ -1.47
VPS4YPR173C COA4Q05809 96 aa5.88□□□□□ -1.47
VPS4YPR173C GPI11Q06636 219 aa5.88□□□□□ -1.47
VPS4YPR173C MRL1Q06815 381 aa5.88□□□□□ -1.47
VPS4YPR173C AAD4Q07747 329 aa5.88□□□□□ -1.47
VPS4YPR173C NGL1Q08213 363 aaKnown RBP5.88□□□□□ -1.47
VPS4YPR173C THP3Q12049 470 aaKnown RBP5.88□□□□□ -1.47
VPS4YPR173C TRM10Q12400 293 aa5.88□□□□□ -1.47
VPS4YPR173C TY1A-LR4P0C2I8 440 aaKnown RBP5.87□□□□□ -1.47
VPS4YPR173C TY1A-DR6P0CX70 440 aa5.87□□□□□ -1.47
VPS4YPR173C TY1A-ER1P0CX71 440 aa5.87□□□□□ -1.47
VPS4YPR173C TY1A-LR2P0CX72 440 aa5.87□□□□□ -1.47
VPS4YPR173C TY1A-PLP0CX73 440 aa5.87□□□□□ -1.47
VPS4YPR173C TY1A-JR1P0CX74 440 aa5.87□□□□□ -1.47
VPS4YPR173C TY1A-LR3P0CX75 440 aa5.87□□□□□ -1.47
VPS4YPR173C TY1A-ML2P0CX76 440 aa5.87□□□□□ -1.47
VPS4YPR173C ACO1P19414 778 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
VPS4YPR173C SGF29P25554 259 aa5.87□□□□□ -1.47
VPS4YPR173C EMC1P25574 760 aa5.87□□□□□ -1.47
VPS4YPR173C PPZ1P26570 692 aa5.87□□□□□ -1.47
VPS4YPR173C PEX3P28795 441 aa5.87□□□□□ -1.47
VPS4YPR173C CLG1P35190 452 aa5.87□□□□□ -1.47
VPS4YPR173C FMP23P38231 175 aa5.87□□□□□ -1.47
VPS4YPR173C FSH1P38777 243 aaKnown RBP5.87□□□□□ -1.47
VPS4YPR173C SFB3P38810 929 aa5.87□□□□□ -1.47
VPS4YPR173C IPT1P38954 527 aa5.87□□□□□ -1.47
VPS4YPR173C HAT2P39984 401 aa5.87□□□□□ -1.47
VPS4YPR173C YEL028WP39989 153 aa5.87□□□□□ -1.47
VPS4YPR173C IRC6P43615 237 aa5.87□□□□□ -1.47
VPS4YPR173C GCD14P46959 383 aaPredicted RBP5.87□□□□□ -1.47
VPS4YPR173C AIM23P47015 356 aa5.87□□□□□ -1.47
VPS4YPR173C EFM3P47163 339 aa5.87□□□□□ -1.47
VPS4YPR173C STB4P50104 949 aa5.87□□□□□ -1.47
VPS4YPR173C YNR063WP53749 607 aa5.87□□□□□ -1.47
VPS4YPR173C ALG11P53954 548 aaKnown RBP5.87□□□□□ -1.47
VPS4YPR173C KTR6P54070 446 aa5.87□□□□□ -1.47
VPS4YPR173C HXT15P54854 567 aa5.87□□□□□ -1.47
VPS4YPR173C YML131WQ03102 365 aa5.87□□□□□ -1.47
VPS4YPR173C ENT5Q03769 411 aaKnown RBP5.87□□□□□ -1.47
VPS4YPR173C SNU56Q03782 492 aaKnown RBP5.87□□□□□ -1.47
VPS4YPR173C APC4Q04601 652 aa5.87□□□□□ -1.47
VPS4YPR173C YMR321CQ04898 105 aa5.87□□□□□ -1.47
VPS4YPR173C YPR196WQ06595 470 aa5.87□□□□□ -1.47
VPS4YPR173C THI72Q08579 599 aa5.87□□□□□ -1.47
VPS4YPR173C GPM2Q12008 311 aa5.87□□□□□ -1.47
VPS4YPR173C TY1A-GR1Q12085 440 aa5.87□□□□□ -1.47
VPS4YPR173C CTF3Q12748 733 aa5.87□□□□□ -1.47
VPS4YPR173C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.87□□□□□ -1.47
VPS4YPR173C TY1A-OLQ92392 440 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms