RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W YMR160WQ03823 816 aa1.77□□□□□ -2.13
YOP1YPR028W DPB4Q04603 196 aaKnown RBP1.77□□□□□ -2.13
YOP1YPR028W LUC7Q07508 261 aaPredicted RBP1.77□□□□□ -2.13
YOP1YPR028W CDC45Q08032 650 aa1.77□□□□□ -2.13
YOP1YPR028W FMP40Q08968 688 aaPredicted RBP1.77□□□□□ -2.13
YOP1YPR028W RRI2Q12348 645 aa1.77□□□□□ -2.13
YOP1YPR028W GCN4P03069 281 aa1.76□□□□□ -2.13
YOP1YPR028W PEP5P12868 1029 aa1.76□□□□□ -2.13
YOP1YPR028W NAT1P12945 854 aaKnown RBP1.76□□□□□ -2.13
YOP1YPR028W HSC82P15108 705 aaKnown RBP1.76□□□□□ -2.13
YOP1YPR028W AMD1P15274 810 aaKnown RBP1.76□□□□□ -2.13
YOP1YPR028W OLE1P21147 510 aaKnown RBP1.76□□□□□ -2.13
YOP1YPR028W SGF29P25554 259 aa1.76□□□□□ -2.13
YOP1YPR028W YCR022CP25620 114 aa1.76□□□□□ -2.13
YOP1YPR028W IMG1P25626 169 aa1.76□□□□□ -2.13
YOP1YPR028W SPC110P32380 944 aa1.76□□□□□ -2.13
YOP1YPR028W YBR144CP34215 104 aa1.76□□□□□ -2.13
YOP1YPR028W YBL055CP34220 418 aaPredicted RBP1.76□□□□□ -2.13
YOP1YPR028W ICS2P38284 255 aa1.76□□□□□ -2.13
YOP1YPR028W OSH3P38713 996 aaKnown RBP1.76□□□□□ -2.13
YOP1YPR028W VID30P53076 958 aa1.76□□□□□ -2.13
YOP1YPR028W YGR066CP53242 292 aa1.76□□□□□ -2.13
YOP1YPR028W BUD32P53323 261 aa1.76□□□□□ -2.13
YOP1YPR028W RLI1Q03195 608 aaKnown RBP1.76□□□□□ -2.13
YOP1YPR028W NGL3Q03210 505 aa1.76□□□□□ -2.13
YOP1YPR028W VPS72Q03388 795 aa1.76□□□□□ -2.13
YOP1YPR028W BNA5Q05979 453 aa1.76□□□□□ -2.13
YOP1YPR028W SYO1Q07395 620 aa1.76□□□□□ -2.13
YOP1YPR028W YEH1Q07804 573 aa1.76□□□□□ -2.13
YOP1YPR028W TMC1Q08422 150 aaPredicted RBP1.76□□□□□ -2.13
YOP1YPR028W CTI6Q08923 506 aa1.76□□□□□ -2.13
YOP1YPR028W RCN2Q12044 265 aa1.76□□□□□ -2.13
YOP1YPR028W AYT1Q12226 474 aa1.76□□□□□ -2.13
YOP1YPR028W SUC2P00724 532 aa1.75□□□□□ -2.13
YOP1YPR028W HEM2P05373 342 aa1.75□□□□□ -2.13
YOP1YPR028W RPL20AP0CX23 172 aaKnown RBP1.75□□□□□ -2.13
YOP1YPR028W RPL20BP0CX24 172 aaPredicted RBP1.75□□□□□ -2.13
YOP1YPR028W APE1P14904 514 aa1.75□□□□□ -2.13
YOP1YPR028W SUI2P20459 304 aaKnown RBP1.75□□□□□ -2.13
YOP1YPR028W PEP3P27801 918 aa1.75□□□□□ -2.13
YOP1YPR028W SEF1P34228 1148 aa1.75□□□□□ -2.13
YOP1YPR028W RPL32P38061 130 aaKnown RBP1.75□□□□□ -2.13
YOP1YPR028W REG2P38232 338 aa1.75□□□□□ -2.13
YOP1YPR028W MTC4P38335 694 aaKnown RBP1.75□□□□□ -2.13
YOP1YPR028W ALG5P40350 334 aa1.75□□□□□ -2.13
YOP1YPR028W RMD8P43620 662 aa1.75□□□□□ -2.13
YOP1YPR028W MRX6P48564 524 aa1.75□□□□□ -2.13
YOP1YPR028W DSD1P53095 428 aa1.75□□□□□ -2.13
YOP1YPR028W LCL3P53153 274 aa1.75□□□□□ -2.13
YOP1YPR028W YGL039WP53183 348 aaKnown RBP1.75□□□□□ -2.13
YOP1YPR028W RPC11Q04307 110 aaPredicted RBP1.75□□□□□ -2.13
YOP1YPR028W GLO2Q05584 274 aa1.75□□□□□ -2.13
YOP1YPR028W IMH1Q06704 911 aaKnown RBP1.75□□□□□ -2.13
YOP1YPR028W SDH5Q08230 162 aa1.75□□□□□ -2.13
YOP1YPR028W YOR365CQ08844 703 aa1.75□□□□□ -2.13
YOP1YPR028W MED1Q12321 566 aa1.75□□□□□ -2.13
YOP1YPR028W YJR112W-AQ3E743 109 aa1.75□□□□□ -2.13
YOP1YPR028W YPT6Q99260 215 aa1.75□□□□□ -2.13
YOP1YPR028W RAD52P06778 471 aaKnown RBP1.74□□□□□ -2.13
YOP1YPR028W PEP4P07267 405 aaKnown RBP1.74□□□□□ -2.13
YOP1YPR028W DFR1P07807 211 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
YOP1YPR028W MRP13P12686 339 aa1.74□□□□□ -2.13
YOP1YPR028W MRP7P12687 371 aa1.74□□□□□ -2.13
YOP1YPR028W CBS1P14066 229 aa1.74□□□□□ -2.13
YOP1YPR028W EST1P17214 699 aaPredicted RBP1.74□□□□□ -2.13
YOP1YPR028W ART10P18634 518 aaKnown RBP1.74□□□□□ -2.13
YOP1YPR028W ELO2P25358 347 aa1.74□□□□□ -2.13
YOP1YPR028W OCA4P25366 362 aa1.74□□□□□ -2.13
YOP1YPR028W RPN12P32496 274 aa1.74□□□□□ -2.13
YOP1YPR028W UBP11P36026 717 aa1.74□□□□□ -2.13
YOP1YPR028W YKL023WP36103 277 aaKnown RBP1.74□□□□□ -2.13
YOP1YPR028W YHR210CP38893 341 aa1.74□□□□□ -2.13
YOP1YPR028W CCT6P39079 546 aa1.74□□□□□ -2.13
YOP1YPR028W CIN4P39110 191 aa1.74□□□□□ -2.13
YOP1YPR028W SCD6P45978 349 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
YOP1YPR028W SNG1P46950 547 aa1.74□□□□□ -2.13
YOP1YPR028W YJR154WP47181 346 aa1.74□□□□□ -2.13
YOP1YPR028W ALT2P52892 507 aa1.74□□□□□ -2.13
YOP1YPR028W YGR126WP53274 230 aa1.74□□□□□ -2.13
YOP1YPR028W VPS75P53853 264 aa1.74□□□□□ -2.13
YOP1YPR028W DUG3P53871 357 aa1.74□□□□□ -2.13
YOP1YPR028W RPT6Q01939 405 aaKnown RBP1.74□□□□□ -2.13
YOP1YPR028W SHR3Q02774 210 aa1.74□□□□□ -2.13
YOP1YPR028W SLD5Q03406 294 aa1.74□□□□□ -2.13
YOP1YPR028W VPS38Q05919 439 aa1.74□□□□□ -2.13
YOP1YPR028W YDL009CQ12210 107 aa1.74□□□□□ -2.13
YOP1YPR028W SOD1P00445 154 aaKnown RBP1.73□□□□□ -2.13
YOP1YPR028W MET8P15807 274 aa1.73□□□□□ -2.13
YOP1YPR028W FRE1P32791 686 aa1.73□□□□□ -2.13
YOP1YPR028W YBR225WP38321 900 aa1.73□□□□□ -2.13
YOP1YPR028W ARF3P40994 183 aaRIP-Chip data1.73□□□□□ -2.13not detected
YOP1YPR028W ALK1P43633 760 aaKnown RBP1.73□□□□□ -2.13
YOP1YPR028W ARE2P53629 642 aaKnown RBP1.73□□□□□ -2.13
YOP1YPR028W IPI3P53877 555 aa1.73□□□□□ -2.13
YOP1YPR028W FIN1Q03898 291 aa1.73□□□□□ -2.13
YOP1YPR028W COQ9Q05779 260 aa1.73□□□□□ -2.13
YOP1YPR028W COG4Q06096 861 aa1.73□□□□□ -2.13
YOP1YPR028W TSR2Q06672 205 aaKnown RBP1.73□□□□□ -2.13
YOP1YPR028W YDL057WQ07379 328 aa1.73□□□□□ -2.13
YOP1YPR028W AVL9Q12500 764 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms