RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C PET9P18239 318 aaKnown RBP4.41□□□□□ -1.7
GDE1YPL110C GSY2P27472 705 aa4.41□□□□□ -1.7
GDE1YPL110C MSS1P32559 526 aaPredicted RBP4.41□□□□□ -1.7
GDE1YPL110C ETR1P38071 380 aa4.41□□□□□ -1.7
GDE1YPL110C RRT2P38332 387 aa4.41□□□□□ -1.7
GDE1YPL110C STB5P38699 743 aa4.41□□□□□ -1.7
GDE1YPL110C RRP3P38712 501 aaKnown RBP4.41□□□□□ -1.7
GDE1YPL110C GIP4P39732 760 aa4.41□□□□□ -1.7
GDE1YPL110C SCC4P40090 624 aa4.41□□□□□ -1.7
GDE1YPL110C NIT2P47016 307 aa4.41□□□□□ -1.7
GDE1YPL110C HLJ1P48353 224 aa4.41□□□□□ -1.7
GDE1YPL110C YPT11P48559 417 aa4.41□□□□□ -1.7
GDE1YPL110C GUP1P53154 560 aa4.41□□□□□ -1.7
GDE1YPL110C YGR117CP53270 476 aa4.41□□□□□ -1.7
GDE1YPL110C OCA2P53949 197 aa4.41□□□□□ -1.7
GDE1YPL110C ADE16P54113 591 aaKnown RBP4.41□□□□□ -1.7
GDE1YPL110C SNP1Q00916 300 aaPredicted RBP4.41□□□□□ -1.7
GDE1YPL110C LEU9Q12166 604 aaKnown RBP4.41□□□□□ -1.7
GDE1YPL110C ATG31Q12421 196 aa4.41□□□□□ -1.7
GDE1YPL110C RPS24AP0CX31 135 aaKnown RBP4.4□□□□□ -1.7
GDE1YPL110C RPS24BP0CX32 135 aaKnown RBP4.4□□□□□ -1.7
GDE1YPL110C HSF1P10961 833 aa4.4□□□□□ -1.7
GDE1YPL110C ABF1P14164 731 aa4.4□□□□□ -1.7
GDE1YPL110C HOP1P20050 605 aa4.4□□□□□ -1.7
GDE1YPL110C AFT1P22149 690 aa4.4□□□□□ -1.7
GDE1YPL110C IDH1P28834 360 aaKnown RBP RIP-Chip data4.4□□□□□ -1.7not detected
GDE1YPL110C DAL3P32459 195 aa4.4□□□□□ -1.7
GDE1YPL110C RPT5P33297 434 aaKnown RBP4.4□□□□□ -1.7
GDE1YPL110C YBR062CP38239 180 aa4.4□□□□□ -1.7
GDE1YPL110C MCX1P38323 520 aaPredicted RBP4.4□□□□□ -1.7
GDE1YPL110C SPC97P38863 823 aa4.4□□□□□ -1.7
GDE1YPL110C SOP4P39543 234 aaPredicted RBP4.4□□□□□ -1.7
GDE1YPL110C RGI2P40188 164 aa4.4□□□□□ -1.7
GDE1YPL110C SMX2P40204 77 aaKnown RBP4.4□□□□□ -1.7
GDE1YPL110C OSW5P40219 148 aa4.4□□□□□ -1.7
GDE1YPL110C GAB1P41733 394 aa4.4□□□□□ -1.7
GDE1YPL110C NOG1Q02892 647 aaKnown RBP4.4□□□□□ -1.7
GDE1YPL110C PRM15Q03262 622 aa4.4□□□□□ -1.7
GDE1YPL110C SKY1Q03656 742 aa4.4□□□□□ -1.7
GDE1YPL110C YLR173WQ06247 608 aa4.4□□□□□ -1.7
GDE1YPL110C YPR127WQ06494 345 aa4.4□□□□□ -1.7
GDE1YPL110C RRP40Q08285 240 aaKnown RBP4.4□□□□□ -1.7
GDE1YPL110C CDC8P00572 216 aa4.4□□□□□ -1.71
GDE1YPL110C MRP13P12686 339 aa4.4□□□□□ -1.71
GDE1YPL110C GFA1P14742 717 aaKnown RBP4.4□□□□□ -1.71
GDE1YPL110C UGA1P17649 471 aa4.4□□□□□ -1.71
GDE1YPL110C CDC50P25656 391 aa4.4□□□□□ -1.71
GDE1YPL110C LAC1P28496 418 aa4.4□□□□□ -1.71
GDE1YPL110C CTS1P29029 562 aa4.4□□□□□ -1.71
GDE1YPL110C SEC65P29478 273 aa4.4□□□□□ -1.71
GDE1YPL110C CCR4P31384 837 aaKnown RBP4.4□□□□□ -1.71
GDE1YPL110C SUA5P32579 426 aa4.4□□□□□ -1.71
GDE1YPL110C KAE1P36132 386 aa4.4□□□□□ -1.71
GDE1YPL110C PEX28P38848 579 aa4.4□□□□□ -1.71
GDE1YPL110C SMF1P38925 575 aa4.4□□□□□ -1.71
GDE1YPL110C MNN9P39107 395 aaKnown RBP4.4□□□□□ -1.71
GDE1YPL110C YJR154WP47181 346 aa4.4□□□□□ -1.71
GDE1YPL110C ASK10P48361 1146 aa4.4□□□□□ -1.71
GDE1YPL110C UFD1P53044 361 aa4.4□□□□□ -1.71
GDE1YPL110C ART5P53244 586 aaKnown RBP4.4□□□□□ -1.71
GDE1YPL110C MTQ2Q03920 221 aaPredicted RBP4.4□□□□□ -1.71
GDE1YPL110C SMP3Q04174 516 aa4.4□□□□□ -1.71
GDE1YPL110C PAL1Q05518 499 aaKnown RBP4.4□□□□□ -1.71
GDE1YPL110C FEX1Q08913 375 aa4.4□□□□□ -1.71
GDE1YPL110C GPA1P08539 472 aa4.4□□□□□ -1.71
GDE1YPL110C BAS1P22035 811 aa4.4□□□□□ -1.71
GDE1YPL110C CSG2P35206 410 aa4.4□□□□□ -1.71
GDE1YPL110C MCM7P38132 845 aa4.4□□□□□ -1.71
GDE1YPL110C VPS62P53285 467 aa4.4□□□□□ -1.71
GDE1YPL110C ELP3Q02908 557 aaKnown RBP4.4□□□□□ -1.71
GDE1YPL110C RUB1Q03919 77 aa4.4□□□□□ -1.71
GDE1YPL110C FAR10Q06001 478 aa4.4□□□□□ -1.71
GDE1YPL110C BCP1Q06338 283 aa4.4□□□□□ -1.71
GDE1YPL110C Q0144Q9ZZW2 109 aa4.4□□□□□ -1.71
GDE1YPL110C MET2P08465 486 aa4.39□□□□□ -1.71
GDE1YPL110C SAN1P22470 610 aa4.39□□□□□ -1.71
GDE1YPL110C SGV1P23293 657 aaKnown RBP4.39□□□□□ -1.71
GDE1YPL110C NDI1P32340 513 aa4.39□□□□□ -1.71
GDE1YPL110C NDC1P32500 655 aa4.39□□□□□ -1.71
GDE1YPL110C OAF3P36023 863 aa4.39□□□□□ -1.71
GDE1YPL110C NTR2P36118 322 aaPredicted RBP4.39□□□□□ -1.71
GDE1YPL110C MRPL3P36516 390 aa4.39□□□□□ -1.71
GDE1YPL110C YBR197CP38306 217 aa4.39□□□□□ -1.71
GDE1YPL110C EFM4P40516 257 aa4.39□□□□□ -1.71
GDE1YPL110C IRC5P43610 853 aa4.39□□□□□ -1.71
GDE1YPL110C PHO86P46956 311 aa4.39□□□□□ -1.71
GDE1YPL110C ORC5P50874 479 aa4.39□□□□□ -1.71
GDE1YPL110C ARO8P53090 500 aaKnown RBP4.39□□□□□ -1.71
GDE1YPL110C YPR109WQ06104 294 aa4.39□□□□□ -1.71
GDE1YPL110C HER1Q12276 1246 aa4.39□□□□□ -1.71
GDE1YPL110C YOR012WQ12351 137 aa4.39□□□□□ -1.71
GDE1YPL110C GPM1P00950 247 aaKnown RBP4.39□□□□□ -1.71
GDE1YPL110C YPK1P12688 680 aaKnown RBP4.39□□□□□ -1.71
GDE1YPL110C COQ1P18900 473 aa4.39□□□□□ -1.71
GDE1YPL110C MIH1P23748 554 aa4.39□□□□□ -1.71
GDE1YPL110C SFP1P32432 683 aa4.39□□□□□ -1.71
GDE1YPL110C BEM3P32873 1128 aa4.39□□□□□ -1.71
GDE1YPL110C MDL1P33310 695 aa4.39□□□□□ -1.71
GDE1YPL110C PRX1P34227 261 aaKnown RBP4.39□□□□□ -1.71
GDE1YPL110C CBT1P36038 271 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms