RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C TMA108P40462 946 aa3.49□□□□□ -1.85
SUB1YMR039C MKT1P40850 830 aaKnown RBP3.49□□□□□ -1.85
SUB1YMR039C SCD6P45978 349 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SUB1YMR039C SRB7P47822 140 aa3.49□□□□□ -1.85
SUB1YMR039C YGL242CP53066 181 aa3.49□□□□□ -1.85
SUB1YMR039C MEP3P53390 489 aa3.49□□□□□ -1.85
SUB1YMR039C MDM1Q01846 1127 aa3.49□□□□□ -1.85
SUB1YMR039C RLI1Q03195 608 aaKnown RBP3.49□□□□□ -1.85
SUB1YMR039C BUD22Q04347 519 aaKnown RBP3.49□□□□□ -1.85
SUB1YMR039C HUA2Q12134 243 aa3.49□□□□□ -1.85
SUB1YMR039C YCR007CP25354 239 aa3.48□□□□□ -1.85
SUB1YMR039C PMU1P36069 295 aa3.48□□□□□ -1.85
SUB1YMR039C TUL1P36096 758 aa3.48□□□□□ -1.85
SUB1YMR039C DRN1P53255 507 aaKnown RBP3.48□□□□□ -1.85
SUB1YMR039C SLD5Q03406 294 aa3.48□□□□□ -1.85
SUB1YMR039C YML037CQ03703 340 aa3.48□□□□□ -1.85
SUB1YMR039C YKU80Q04437 629 aa3.48□□□□□ -1.85
SUB1YMR039C MRPL51Q06090 140 aaPredicted RBP3.48□□□□□ -1.85
SUB1YMR039C TSR2Q06672 205 aaKnown RBP3.48□□□□□ -1.85
SUB1YMR039C FMP40Q08968 688 aaPredicted RBP3.48□□□□□ -1.85
SUB1YMR039C SPE4Q12455 300 aa3.48□□□□□ -1.85
SUB1YMR039C INH1P01097 85 aa3.47□□□□□ -1.85
SUB1YMR039C PMR1P13586 950 aa3.47□□□□□ -1.85
SUB1YMR039C YCR022CP25620 114 aa3.47□□□□□ -1.85
SUB1YMR039C SWH1P35845 1188 aa3.47□□□□□ -1.85
SUB1YMR039C SHO1P40073 367 aa3.47□□□□□ -1.85
SUB1YMR039C ENT1Q12518 454 aa3.47□□□□□ -1.85
SUB1YMR039C YBR126W-AQ8TGU7 68 aa3.47□□□□□ -1.85
SUB1YMR039C SUC2P00724 532 aa3.46□□□□□ -1.86
SUB1YMR039C CDC16P09798 840 aa3.46□□□□□ -1.86
SUB1YMR039C YCK1P23291 538 aa3.46□□□□□ -1.86
SUB1YMR039C FRE1P32791 686 aa3.46□□□□□ -1.86
SUB1YMR039C ALG8P40351 577 aa3.46□□□□□ -1.86
SUB1YMR039C SHE10P53075 577 aa3.46□□□□□ -1.86
SUB1YMR039C IVY1Q04934 453 aa3.46□□□□□ -1.86
SUB1YMR039C VPS74Q06385 345 aa3.46□□□□□ -1.86
SUB1YMR039C YDL057WQ07379 328 aa3.46□□□□□ -1.86
SUB1YMR039C YCL021W-AQ96VH3 125 aa3.46□□□□□ -1.86
SUB1YMR039C CDC31P06704 161 aaKnown RBP3.45□□□□□ -1.86
SUB1YMR039C RAD52P06778 471 aaKnown RBP3.45□□□□□ -1.86
SUB1YMR039C PEP4P07267 405 aaKnown RBP3.45□□□□□ -1.86
SUB1YMR039C PUT3P25502 979 aaPredicted RBP3.45□□□□□ -1.86
SUB1YMR039C POL4P25615 582 aa3.45□□□□□ -1.86
SUB1YMR039C UTR4P32626 227 aa3.45□□□□□ -1.86
SUB1YMR039C UBP11P36026 717 aa3.45□□□□□ -1.86
SUB1YMR039C MUD2P36084 527 aaKnown RBP3.45□□□□□ -1.86
SUB1YMR039C MSO1P53604 210 aaKnown RBP3.45□□□□□ -1.86
SUB1YMR039C HNT3Q08702 217 aa3.45□□□□□ -1.86
SUB1YMR039C LSP1Q12230 341 aaKnown RBP3.45□□□□□ -1.86
SUB1YMR039C MED1Q12321 566 aa3.45□□□□□ -1.86
SUB1YMR039C ART10P18634 518 aaKnown RBP3.44□□□□□ -1.86
SUB1YMR039C EXO70P19658 623 aa3.44□□□□□ -1.86
SUB1YMR039C TIF3P34167 436 aaKnown RBP3.44□□□□□ -1.86
SUB1YMR039C CCT6P39079 546 aa3.44□□□□□ -1.86
SUB1YMR039C HAT2P39984 401 aa3.44□□□□□ -1.86
SUB1YMR039C ALK1P43633 760 aaKnown RBP3.44□□□□□ -1.86
SUB1YMR039C LCL3P53153 274 aa3.44□□□□□ -1.86
SUB1YMR039C MDG1P53885 366 aa3.44□□□□□ -1.86
SUB1YMR039C IRC15Q02733 499 aa3.44□□□□□ -1.86
SUB1YMR039C SPC19Q03954 165 aa3.44□□□□□ -1.86
SUB1YMR039C YDR056CQ12025 205 aa3.44□□□□□ -1.86
SUB1YMR039C NOP58Q12499 511 aaKnown RBP3.44□□□□□ -1.86
SUB1YMR039C LPD1P09624 499 aaKnown RBP3.43□□□□□ -1.86
SUB1YMR039C RNA14P25298 677 aaKnown RBP3.43□□□□□ -1.86
SUB1YMR039C NDE1P40215 560 aa3.43□□□□□ -1.86
SUB1YMR039C DUO1P53168 247 aaKnown RBP3.43□□□□□ -1.86
SUB1YMR039C PHO92Q06390 306 aa3.43□□□□□ -1.86
SUB1YMR039C CTF3Q12748 733 aa3.43□□□□□ -1.86
SUB1YMR039C HSH49Q99181 213 aaPredicted RBP3.43□□□□□ -1.86
SUB1YMR039C SEC53P07283 254 aaKnown RBP3.42□□□□□ -1.86
SUB1YMR039C MRP13P12686 339 aa3.42□□□□□ -1.86
SUB1YMR039C MRP7P12687 371 aa3.42□□□□□ -1.86
SUB1YMR039C LDB16P25587 256 aa3.42□□□□□ -1.86
SUB1YMR039C SHP1P34223 423 aa3.42□□□□□ -1.86
SUB1YMR039C NOP16P40007 231 aaKnown RBP3.42□□□□□ -1.86
SUB1YMR039C ESL1P40456 1118 aa3.42□□□□□ -1.86
SUB1YMR039C NMD4Q12129 218 aa3.42□□□□□ -1.86
SUB1YMR039C ERP4Q12450 207 aa3.42□□□□□ -1.86
SUB1YMR039C SGS1P35187 1447 aa3.42□□□□□ -1.86
SUB1YMR039C SEM1O94742 89 aa3.41□□□□□ -1.86
SUB1YMR039C PAH1P32567 862 aa3.41□□□□□ -1.86
SUB1YMR039C NFU1P32860 256 aa3.41□□□□□ -1.86
SUB1YMR039C MRPL4P36517 319 aa3.41□□□□□ -1.86
SUB1YMR039C DUG2P38149 878 aa3.41□□□□□ -1.86
SUB1YMR039C TIF4631P39935 952 aaKnown RBP3.41□□□□□ -1.86
SUB1YMR039C ELP2P42935 788 aa3.41□□□□□ -1.86
SUB1YMR039C GPI1P53306 609 aa3.41□□□□□ -1.86
SUB1YMR039C WSC2P53832 503 aa3.41□□□□□ -1.86
SUB1YMR039C TOF2Q02208 771 aa3.41□□□□□ -1.86
SUB1YMR039C IMH1Q06704 911 aaKnown RBP3.41□□□□□ -1.86
SUB1YMR039C THP1Q08231 455 aa3.41□□□□□ -1.86
SUB1YMR039C YER078W-AQ3E7A2 54 aa3.41□□□□□ -1.86
SUB1YMR039C FOB1O13329 566 aa3.4□□□□□ -1.87
SUB1YMR039C EST1P17214 699 aaPredicted RBP3.4□□□□□ -1.87
SUB1YMR039C ELO2P25358 347 aa3.4□□□□□ -1.87
SUB1YMR039C PEP3P27801 918 aa3.4□□□□□ -1.87
SUB1YMR039C MSN2P33748 704 aa3.4□□□□□ -1.87
SUB1YMR039C SEF1P34228 1148 aa3.4□□□□□ -1.87
SUB1YMR039C BNA4P38169 460 aa3.4□□□□□ -1.87
SUB1YMR039C TCM62P38228 572 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms