RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C SIP2P34164 415 aaKnown RBP5□□□□□ -1.61
PEX12YMR026C SHP1P34223 423 aa5□□□□□ -1.61
PEX12YMR026C SRO77P38163 1010 aa5□□□□□ -1.61
PEX12YMR026C CCT4P39078 528 aaKnown RBP5□□□□□ -1.61
PEX12YMR026C FIN1Q03898 291 aa5□□□□□ -1.61
PEX12YMR026C HCR1Q05775 265 aaKnown RBP5□□□□□ -1.61
PEX12YMR026C PHO2P07269 559 aa4.99□□□□□ -1.61
PEX12YMR026C PRD1P25375 712 aa4.99□□□□□ -1.61
PEX12YMR026C WBP1P33767 430 aaKnown RBP4.99□□□□□ -1.61
PEX12YMR026C RBG2P53295 368 aaKnown RBP4.99□□□□□ -1.61
PEX12YMR026C MFB1Q04922 465 aa4.99□□□□□ -1.61
PEX12YMR026C THP1Q08231 455 aa4.99□□□□□ -1.61
PEX12YMR026C SUC2P00724 532 aa4.98□□□□□ -1.61
PEX12YMR026C DUG2P38149 878 aa4.98□□□□□ -1.61
PEX12YMR026C DHH1P39517 506 aaKnown RBP4.98□□□□□ -1.61
PEX12YMR026C VPS52P39904 641 aa4.98□□□□□ -1.61
PEX12YMR026C MET28P40573 187 aa4.98□□□□□ -1.61
PEX12YMR026C RMD8P43620 662 aa4.98□□□□□ -1.61
PEX12YMR026C AIM22P47051 409 aa4.98□□□□□ -1.61
PEX12YMR026C RPT6Q01939 405 aaKnown RBP4.98□□□□□ -1.61
PEX12YMR026C SLD5Q03406 294 aa4.98□□□□□ -1.61
PEX12YMR026C YTH1Q06102 208 aaPredicted RBP4.98□□□□□ -1.61
PEX12YMR026C SYO1Q07395 620 aa4.98□□□□□ -1.61
PEX12YMR026C FOB1O13329 566 aa4.97□□□□□ -1.61
PEX12YMR026C HSC82P15108 705 aaKnown RBP4.97□□□□□ -1.61
PEX12YMR026C AMD1P15274 810 aaKnown RBP4.97□□□□□ -1.61
PEX12YMR026C PRP2P20095 876 aaPredicted RBP4.97□□□□□ -1.61
PEX12YMR026C OCA4P25366 362 aa4.97□□□□□ -1.61
PEX12YMR026C PRO3P32263 286 aaKnown RBP4.97□□□□□ -1.61
PEX12YMR026C YME1P32795 747 aa4.97□□□□□ -1.61
PEX12YMR026C BNA4P38169 460 aa4.97□□□□□ -1.61
PEX12YMR026C TCM62P38228 572 aaKnown RBP4.97□□□□□ -1.61
PEX12YMR026C TIF4631P39935 952 aaKnown RBP4.97□□□□□ -1.61
PEX12YMR026C YEL057CP39983 233 aa4.97□□□□□ -1.61
PEX12YMR026C SCD6P45978 349 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61 RIP-Chip
PEX12YMR026C TIM10P87108 93 aa4.97□□□□□ -1.61
PEX12YMR026C BNA5Q05979 453 aa4.97□□□□□ -1.61
PEX12YMR026C RPL15AP05748 204 aaKnown RBP4.96□□□□□ -1.62
PEX12YMR026C YCR007CP25354 239 aa4.96□□□□□ -1.62
PEX12YMR026C PAP1P29468 568 aaKnown RBP4.96□□□□□ -1.62
PEX12YMR026C NDC1P32500 655 aa4.96□□□□□ -1.62
PEX12YMR026C MRE11P32829 692 aa4.96□□□□□ -1.62
PEX12YMR026C MUM2P38236 366 aa4.96□□□□□ -1.62
PEX12YMR026C SPO22P40511 975 aa4.96□□□□□ -1.62
PEX12YMR026C DOT5P40553 215 aa4.96□□□□□ -1.62
PEX12YMR026C RTT101P47050 842 aa4.96□□□□□ -1.62
PEX12YMR026C PET130P47065 347 aa4.96□□□□□ -1.62
PEX12YMR026C UTR4P32626 227 aa4.95□□□□□ -1.62
PEX12YMR026C PTR2P32901 601 aa4.95□□□□□ -1.62
PEX12YMR026C LOS1P33418 1100 aaPredicted RBP4.95□□□□□ -1.62
PEX12YMR026C MSN2P33748 704 aa4.95□□□□□ -1.62
PEX12YMR026C MDM31P38880 579 aa4.95□□□□□ -1.62
PEX12YMR026C HEF3P53978 1044 aaKnown RBP4.95□□□□□ -1.62
PEX12YMR026C RLI1Q03195 608 aaKnown RBP4.95□□□□□ -1.62
PEX12YMR026C IVY1Q04934 453 aa4.95□□□□□ -1.62
PEX12YMR026C RTT103Q05543 409 aa4.95□□□□□ -1.62
PEX12YMR026C YDL009CQ12210 107 aa4.95□□□□□ -1.62
PEX12YMR026C YBR298C-AQ8TGK4 73 aa4.95□□□□□ -1.62
PEX12YMR026C CAR1P00812 333 aaKnown RBP4.94□□□□□ -1.62
PEX12YMR026C ARG3P05150 338 aa4.94□□□□□ -1.62
PEX12YMR026C MRP7P12687 371 aa4.94□□□□□ -1.62
PEX12YMR026C MTF1P14908 341 aaKnown RBP4.94□□□□□ -1.62
PEX12YMR026C ATS1P31386 333 aa4.94□□□□□ -1.62
PEX12YMR026C ZPR1P53303 486 aaKnown RBP4.94□□□□□ -1.62
PEX12YMR026C GIR2Q03768 265 aaPredicted RBP4.94□□□□□ -1.62
PEX12YMR026C YDR239CQ03780 787 aa4.94□□□□□ -1.62
PEX12YMR026C ERP1Q05359 219 aaKnown RBP4.94□□□□□ -1.62
PEX12YMR026C PHO92Q06390 306 aa4.94□□□□□ -1.62
PEX12YMR026C SPC110P32380 944 aa4.93□□□□□ -1.62
PEX12YMR026C FRE1P32791 686 aa4.93□□□□□ -1.62
PEX12YMR026C MBB1P39534 108 aa4.93□□□□□ -1.62
PEX12YMR026C RPR2P40571 144 aa4.93□□□□□ -1.62
PEX12YMR026C ROK1P45818 564 aaPredicted RBP4.93□□□□□ -1.62
PEX12YMR026C MRPL51Q06090 140 aaPredicted RBP4.93□□□□□ -1.62
PEX12YMR026C PPT2Q12036 173 aa4.93□□□□□ -1.62
PEX12YMR026C SEC39Q12745 709 aa4.93□□□□□ -1.62
PEX12YMR026C COR1P07256 457 aa4.92□□□□□ -1.62
PEX12YMR026C BUD14P27637 709 aa4.92□□□□□ -1.62
PEX12YMR026C CST26P38226 397 aa4.92□□□□□ -1.62
PEX12YMR026C RPH1P39956 796 aa4.92□□□□□ -1.62
PEX12YMR026C ARF3P40994 183 aaRIP-Chip data4.92□□□□□ -1.62 RIP-Chip
PEX12YMR026C YFR016CP43597 1233 aaKnown RBP4.92□□□□□ -1.62
PEX12YMR026C CAF130P53280 1122 aaPredicted RBP4.92□□□□□ -1.62
PEX12YMR026C LSP1Q12230 341 aaKnown RBP4.92□□□□□ -1.62
PEX12YMR026C SET6Q12529 373 aa4.92□□□□□ -1.62
PEX12YMR026C YDL007C-AQ2V2Q0 85 aa4.92□□□□□ -1.62
PEX12YMR026C BRR1Q99177 341 aaPredicted RBP4.92□□□□□ -1.62
PEX12YMR026C YCR022CP25620 114 aa4.91□□□□□ -1.62
PEX12YMR026C RGT1P32862 1170 aa4.91□□□□□ -1.62
PEX12YMR026C MFT1P33441 392 aaKnown RBP4.91□□□□□ -1.62
PEX12YMR026C MTC4P38335 694 aaKnown RBP4.91□□□□□ -1.62
PEX12YMR026C ESL1P40456 1118 aa4.91□□□□□ -1.62
PEX12YMR026C TWF1P53250 332 aa4.91□□□□□ -1.62
PEX12YMR026C GPI1P53306 609 aa4.91□□□□□ -1.62
PEX12YMR026C RBS1Q05672 457 aaKnown RBP4.91□□□□□ -1.62
PEX12YMR026C AYT1Q12226 474 aa4.91□□□□□ -1.62
PEX12YMR026C RPL31BP0C2H9 113 aaKnown RBP4.9□□□□□ -1.63
PEX12YMR026C NDE1P40215 560 aa4.9□□□□□ -1.63
PEX12YMR026C IRC6P43615 237 aa4.9□□□□□ -1.63
PEX12YMR026C YDL186WP48568 277 aa4.9□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms