RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W EAR1Q03212 550 aa7.28□□□□□ -1.24
CTF3YLR381W YDR131CQ03899 556 aa7.28□□□□□ -1.24
CTF3YLR381W YDR387CQ04162 555 aa7.28□□□□□ -1.24
CTF3YLR381W MFB1Q04922 465 aa7.28□□□□□ -1.24
CTF3YLR381W HDA3Q06623 655 aa7.28□□□□□ -1.24
CTF3YLR381W SAM4Q08985 325 aaKnown RBP7.28□□□□□ -1.24
CTF3YLR381W GPM3Q12326 303 aa7.28□□□□□ -1.24
CTF3YLR381W SRN2Q99176 213 aa7.28□□□□□ -1.24
CTF3YLR381W SCEIP03882 235 aa7.27□□□□□ -1.25
CTF3YLR381W SNF3P10870 884 aa7.27□□□□□ -1.25
CTF3YLR381W BAR1P12630 587 aa7.27□□□□□ -1.25
CTF3YLR381W DMC1P25453 334 aa7.27□□□□□ -1.25
CTF3YLR381W CAP1P28495 268 aaKnown RBP7.27□□□□□ -1.25
CTF3YLR381W SRB2P34162 210 aa7.27□□□□□ -1.25
CTF3YLR381W RSP5P39940 809 aaKnown RBP7.27□□□□□ -1.25
CTF3YLR381W SER2P42941 309 aa7.27□□□□□ -1.25
CTF3YLR381W GSM1P42950 618 aa7.27□□□□□ -1.25
CTF3YLR381W RPS12P48589 143 aaKnown RBP7.27□□□□□ -1.25
CTF3YLR381W ARP4P80428 489 aa7.27□□□□□ -1.25
CTF3YLR381W PRP42Q03776 544 aaKnown RBP7.27□□□□□ -1.25
CTF3YLR381W RUB1Q03919 77 aa7.27□□□□□ -1.25
CTF3YLR381W CSN9Q03981 162 aa7.27□□□□□ -1.25
CTF3YLR381W MYO5Q04439 1219 aaKnown RBP7.27□□□□□ -1.25
CTF3YLR381W PAL1Q05518 499 aaKnown RBP7.27□□□□□ -1.25
CTF3YLR381W MRX10Q05648 414 aa7.27□□□□□ -1.25
CTF3YLR381W EMG1Q06287 252 aaKnown RBP7.27□□□□□ -1.25
CTF3YLR381W SVS1Q12254 260 aa7.27□□□□□ -1.25
CTF3YLR381W BMT6Q12291 365 aa7.27□□□□□ -1.25
CTF3YLR381W REP2P03872 296 aa7.27□□□□□ -1.25
CTF3YLR381W TPK1P06244 397 aa7.27□□□□□ -1.25
CTF3YLR381W SEC53P07283 254 aaKnown RBP7.27□□□□□ -1.25
CTF3YLR381W MOD5P07884 428 aa7.27□□□□□ -1.25
CTF3YLR381W FUR1P18562 216 aaKnown RBP7.27□□□□□ -1.25
CTF3YLR381W NGG1P32494 702 aa7.27□□□□□ -1.25
CTF3YLR381W SRP102P36057 244 aaPredicted RBP7.27□□□□□ -1.25
CTF3YLR381W GPX2P38143 162 aa7.27□□□□□ -1.25
CTF3YLR381W YBR259WP38338 688 aa7.27□□□□□ -1.25
CTF3YLR381W NVJ1P38881 321 aa7.27□□□□□ -1.25
CTF3YLR381W GIP4P39732 760 aa7.27□□□□□ -1.25
CTF3YLR381W GTO1P48239 356 aa7.27□□□□□ -1.25
CTF3YLR381W ART5P53244 586 aaKnown RBP7.27□□□□□ -1.25
CTF3YLR381W OCA2P53949 197 aa7.27□□□□□ -1.25
CTF3YLR381W YCL001W-AP87012 153 aa7.27□□□□□ -1.25
CTF3YLR381W DPB4Q04603 196 aaKnown RBP7.27□□□□□ -1.25
CTF3YLR381W GRS2Q06817 618 aa7.27□□□□□ -1.25
CTF3YLR381W FRE3Q08905 711 aa7.27□□□□□ -1.25
CTF3YLR381W YPL216WQ08964 1102 aa7.27□□□□□ -1.25
CTF3YLR381W SAS5Q99314 248 aa7.27□□□□□ -1.25
CTF3YLR381W FOB1O13329 566 aa7.26□□□□□ -1.25
CTF3YLR381W COBP00163 385 aa7.26□□□□□ -1.25
CTF3YLR381W PHO5P00635 467 aa7.26□□□□□ -1.25
CTF3YLR381W FPS1P23900 669 aa7.26□□□□□ -1.25
CTF3YLR381W SIP1P32578 815 aa7.26□□□□□ -1.25
CTF3YLR381W COS8P38723 381 aa7.26□□□□□ -1.25
CTF3YLR381W AIM18P38884 321 aa7.26□□□□□ -1.25
CTF3YLR381W PTI1P39927 425 aaPredicted RBP7.26□□□□□ -1.25
CTF3YLR381W GIM4P40005 111 aaKnown RBP7.26□□□□□ -1.25
CTF3YLR381W YIR035CP40579 254 aa7.26□□□□□ -1.25
CTF3YLR381W ECM27P47144 725 aa7.26□□□□□ -1.25
CTF3YLR381W POP6P53218 158 aa7.26□□□□□ -1.25
CTF3YLR381W BIO4P53630 237 aa7.26□□□□□ -1.25
CTF3YLR381W CPR8P53728 308 aa7.26□□□□□ -1.25
CTF3YLR381W AIM36Q03798 255 aa7.26□□□□□ -1.25
CTF3YLR381W CDA2Q06703 312 aa7.26□□□□□ -1.25
CTF3YLR381W MMP1Q12372 583 aa7.26□□□□□ -1.25
CTF3YLR381W YBL029C-AQ3E756 94 aa7.26□□□□□ -1.25
CTF3YLR381W TDH1P00360 332 aaKnown RBP7.25□□□□□ -1.25
CTF3YLR381W KIN28P06242 306 aa7.25□□□□□ -1.25
CTF3YLR381W RPS24AP0CX31 135 aaKnown RBP7.25□□□□□ -1.25
CTF3YLR381W RPS24BP0CX32 135 aaKnown RBP7.25□□□□□ -1.25
CTF3YLR381W PPH22P23595 377 aa7.25□□□□□ -1.25
CTF3YLR381W PDR3P33200 976 aa7.25□□□□□ -1.25
CTF3YLR381W MAL32P38158 584 aa7.25□□□□□ -1.25
CTF3YLR381W ERV46P39727 415 aa7.25□□□□□ -1.25
CTF3YLR381W MIT1P40002 666 aa7.25□□□□□ -1.25
CTF3YLR381W YER010CP40011 234 aa7.25□□□□□ -1.25
CTF3YLR381W LSM4P40070 187 aaKnown RBP7.25□□□□□ -1.25
CTF3YLR381W RFC2P40348 353 aa7.25□□□□□ -1.25
CTF3YLR381W ALG8P40351 577 aa7.25□□□□□ -1.25
CTF3YLR381W THI6P41835 540 aa7.25□□□□□ -1.25
CTF3YLR381W BUD13P46947 266 aaPredicted RBP7.25□□□□□ -1.25
CTF3YLR381W CCC1P47818 322 aa7.25□□□□□ -1.25
CTF3YLR381W MAL12P53341 584 aa7.25□□□□□ -1.25
CTF3YLR381W YMD8Q03697 442 aa7.25□□□□□ -1.25
CTF3YLR381W TRE2Q08693 809 aa7.25□□□□□ -1.25
CTF3YLR381W YOR283WQ12040 230 aaKnown RBP7.25□□□□□ -1.25
CTF3YLR381W RRD2Q12461 358 aa7.25□□□□□ -1.25
CTF3YLR381W PHR1P05066 565 aaKnown RBP RIP-Chip data7.25□□□□□ -1.25not detected
CTF3YLR381W ATP4P05626 244 aa7.25□□□□□ -1.25
CTF3YLR381W YFR010W-AP0C5N0 62 aa7.25□□□□□ -1.25
CTF3YLR381W INO1P11986 533 aa7.25□□□□□ -1.25
CTF3YLR381W UGA1P17649 471 aa7.25□□□□□ -1.25
CTF3YLR381W TRX1P22217 103 aaKnown RBP7.25□□□□□ -1.25
CTF3YLR381W RNA15P25299 296 aaPredicted RBP7.25□□□□□ -1.25
CTF3YLR381W YIM1P28625 365 aa7.25□□□□□ -1.25
CTF3YLR381W HEM12P32347 362 aaPredicted RBP7.25□□□□□ -1.25
CTF3YLR381W APE2P32454 952 aaKnown RBP7.25□□□□□ -1.25
CTF3YLR381W PRP21P32524 280 aaPredicted RBP7.25□□□□□ -1.25
CTF3YLR381W LST4P34239 828 aa7.25□□□□□ -1.25
CTF3YLR381W APM2P38700 605 aa7.25□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms