RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B IME4P41833 600 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B NOP19P53317 196 aaPredicted RBP3.38□□□□□ -1.87
YLR227W-BYLR227W-B MSH5Q12175 901 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B HOP09932 586 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B PRI2P20457 528 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B BUB3P26449 341 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B MEP1P40260 492 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B UPF3P48412 387 aaKnown RBP3.38□□□□□ -1.87
YLR227W-BYLR227W-B PET117Q02771 107 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B QCR6P00127 147 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B MSW1P04803 379 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B PPH21P23594 369 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B YSP3P25036 478 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B SEC1P30619 724 aaKnown RBP3.38□□□□□ -1.87
YLR227W-BYLR227W-B SRB2P34162 210 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B PXL1P36166 706 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B SRO77P38163 1010 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B YHL017WP38745 532 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B PCL5P38794 229 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B PEX18P38855 283 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B ALG8P40351 577 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B APT1P49435 187 aaKnown RBP3.38□□□□□ -1.87
YLR227W-BYLR227W-B ROD1Q02805 837 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B TRE1Q08919 783 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B RIM15P43565 1770 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B FKS3Q04952 1785 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B PUT2P07275 575 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B KAR1P11927 433 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B AIM6Q07716 390 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B YPR117WQ06116 2489 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B PDR1P12383 1068 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B CDC15P27636 974 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B YBR056WP38081 501 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B ATG32P40458 529 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B SOL1P50278 321 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B REG1Q00816 1014 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B MTQ2Q03920 221 aaPredicted RBP3.37□□□□□ -1.87
YLR227W-BYLR227W-B SXM1Q04175 944 aaKnown RBP3.37□□□□□ -1.87
YLR227W-BYLR227W-B ECM18Q04623 453 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B NAG1Q8TGN9 163 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B RPS4AP0CX35 261 aaKnown RBP3.37□□□□□ -1.87
YLR227W-BYLR227W-B RPS4BP0CX36 261 aaKnown RBP3.37□□□□□ -1.87
YLR227W-BYLR227W-B HSP60P19882 572 aaKnown RBP3.37□□□□□ -1.87
YLR227W-BYLR227W-B RPC82P32349 654 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B EFM5P53200 248 aaKnown RBP3.37□□□□□ -1.87
YLR227W-BYLR227W-B PUF3Q07807 879 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
YLR227W-BYLR227W-B FCY22Q12119 530 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B PRP46Q12417 451 aaPredicted RBP3.37□□□□□ -1.87
YLR227W-BYLR227W-B RIP1P08067 215 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B PIH1P38768 344 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B JEM1P40358 645 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B GIS1Q03833 894 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B BCH1Q05029 724 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B YSF3P0C074 85 aaPredicted RBP3.37□□□□□ -1.87
YLR227W-BYLR227W-B YJL197C-AP0C5P0 93 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B AAD3P25612 363 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B SEC31P38968 1273 aaKnown RBP3.37□□□□□ -1.87
YLR227W-BYLR227W-B PHB1P40961 287 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B ATG36P46983 293 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B MPS3P47069 682 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B ECM27P47144 725 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B RSN1Q03516 953 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B KRE28Q04431 385 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B BUR2Q05949 395 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B YPR097WQ06839 1073 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B YTM1Q12024 460 aaPredicted RBP3.37□□□□□ -1.87
YLR227W-BYLR227W-B GLO4Q12320 285 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B YOR111WQ99210 232 aa3.37□□□□□ -1.87
YLR227W-BYLR227W-B COX6P00427 148 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B PWP1P21304 576 aaKnown RBP3.36□□□□□ -1.87
YLR227W-BYLR227W-B YCK1P23291 538 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B OMA1P36163 345 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B MRPL36P36531 177 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B GET2P40056 285 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B CFD1P40558 293 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B ECO1P43605 281 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B PUN1Q06991 263 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B YLR036CQ07986 203 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B RCL1Q08096 367 aaPredicted RBP3.36□□□□□ -1.87
YLR227W-BYLR227W-B SSC1P0CS90 654 aaKnown RBP3.36□□□□□ -1.87
YLR227W-BYLR227W-B YPK1P12688 680 aaKnown RBP3.36□□□□□ -1.87
YLR227W-BYLR227W-B CBS1P14066 229 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B CNA1P23287 553 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B PEX3P28795 441 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B YEF1P32622 495 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B YKR073CP36153 106 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B REE1P40893 198 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B MSY1P48527 492 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B YNR062CP53748 327 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B RBS1Q05672 457 aaKnown RBP3.36□□□□□ -1.87
YLR227W-BYLR227W-B SUE1Q06524 206 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B GUP2Q08929 609 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B PUS9Q12069 462 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B RPN5Q12250 445 aaKnown RBP3.36□□□□□ -1.87
YLR227W-BYLR227W-B LSO1Q3E827 93 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B TAH1P25638 111 aaPredicted RBP3.36□□□□□ -1.87
YLR227W-BYLR227W-B ERG1P32476 496 aaKnown RBP3.36□□□□□ -1.87
YLR227W-BYLR227W-B SRB4P32569 687 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B GYP6P32806 458 aa3.36□□□□□ -1.87
YLR227W-BYLR227W-B UGP1P32861 499 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms