RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C RPN12P32496 274 aa2.55□□□□□ -2
CMS1YLR003C SSE2P32590 693 aaKnown RBP2.55□□□□□ -2
CMS1YLR003C PRS1P32895 427 aaKnown RBP2.55□□□□□ -2
CMS1YLR003C YBR144CP34215 104 aa2.55□□□□□ -2
CMS1YLR003C NOP4P37838 685 aaKnown RBP2.55□□□□□ -2
CMS1YLR003C FLC2P39719 783 aa2.55□□□□□ -2
CMS1YLR003C IMD4P50094 524 aaKnown RBP2.55□□□□□ -2
CMS1YLR003C YGL082WP53155 381 aa2.55□□□□□ -2
CMS1YLR003C YGR126WP53274 230 aa2.55□□□□□ -2
CMS1YLR003C YKU80Q04437 629 aa2.55□□□□□ -2
CMS1YLR003C CDC45Q08032 650 aa2.55□□□□□ -2
CMS1YLR003C TMC1Q08422 150 aaPredicted RBP2.55□□□□□ -2
CMS1YLR003C YPT6Q99260 215 aa2.55□□□□□ -2
CMS1YLR003C INH1P01097 85 aa2.54□□□□□ -2
CMS1YLR003C GAL80P04387 435 aa2.54□□□□□ -2
CMS1YLR003C MRP13P12686 339 aa2.54□□□□□ -2
CMS1YLR003C MET8P15807 274 aa2.54□□□□□ -2
CMS1YLR003C TYR1P20049 452 aa2.54□□□□□ -2
CMS1YLR003C YME1P32795 747 aa2.54□□□□□ -2
CMS1YLR003C NUP133P36161 1157 aa2.54□□□□□ -2
CMS1YLR003C UBA4P38820 440 aa2.54□□□□□ -2
CMS1YLR003C NAB3P38996 802 aaKnown RBP RIP-Chip data2.54□□□□□ -2 RIP-Chip
CMS1YLR003C ERP2P39704 215 aa2.54□□□□□ -2
CMS1YLR003C NDE1P40215 560 aa2.54□□□□□ -2
CMS1YLR003C SGN1P40561 250 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
CMS1YLR003C IDP2P41939 412 aa2.54□□□□□ -2
CMS1YLR003C SHR3Q02774 210 aa2.54□□□□□ -2
CMS1YLR003C COG4Q06096 861 aa2.54□□□□□ -2
CMS1YLR003C DIC1Q06143 298 aa2.54□□□□□ -2
CMS1YLR003C RTT109Q07794 436 aa2.54□□□□□ -2
CMS1YLR003C YEH1Q07804 573 aa2.54□□□□□ -2
CMS1YLR003C PDH1Q12428 516 aaKnown RBP2.54□□□□□ -2
CMS1YLR003C ARP6Q12509 438 aa2.54□□□□□ -2
CMS1YLR003C ART10P18634 518 aaKnown RBP2.53□□□□□ -2
CMS1YLR003C OLE1P21147 510 aaKnown RBP2.53□□□□□ -2
CMS1YLR003C BUD5P25300 642 aaPredicted RBP2.53□□□□□ -2
CMS1YLR003C SNC1P31109 117 aa2.53□□□□□ -2
CMS1YLR003C NDC1P32500 655 aa2.53□□□□□ -2
CMS1YLR003C YNK1P36010 153 aaKnown RBP2.53□□□□□ -2
CMS1YLR003C YKL023WP36103 277 aaKnown RBP2.53□□□□□ -2
CMS1YLR003C LAG1P38703 411 aa2.53□□□□□ -2
CMS1YLR003C CIN4P39110 191 aa2.53□□□□□ -2
CMS1YLR003C YTA12P40341 825 aa2.53□□□□□ -2
CMS1YLR003C YGR066CP53242 292 aa2.53□□□□□ -2
CMS1YLR003C VPS75P53853 264 aa2.53□□□□□ -2
CMS1YLR003C YDR239CQ03780 787 aa2.53□□□□□ -2
CMS1YLR003C GLO2Q05584 274 aa2.53□□□□□ -2
CMS1YLR003C VPS38Q05919 439 aa2.53□□□□□ -2
CMS1YLR003C NMD4Q12129 218 aa2.53□□□□□ -2
CMS1YLR003C RLM1Q12224 676 aa2.53□□□□□ -2
CMS1YLR003C YDL012CQ12489 107 aa2.53□□□□□ -2
CMS1YLR003C YJR112W-AQ3E743 109 aa2.53□□□□□ -2
CMS1YLR003C FOB1O13329 566 aa2.52□□□□□ -2.01
CMS1YLR003C HEM2P05373 342 aa2.52□□□□□ -2.01
CMS1YLR003C MTF1P14908 341 aaKnown RBP2.52□□□□□ -2.01
CMS1YLR003C SEC62P21825 274 aa2.52□□□□□ -2.01
CMS1YLR003C OCA4P25366 362 aa2.52□□□□□ -2.01
CMS1YLR003C PTR2P32901 601 aa2.52□□□□□ -2.01
CMS1YLR003C TCD2P36101 447 aaKnown RBP2.52□□□□□ -2.01
CMS1YLR003C CST26P38226 397 aa2.52□□□□□ -2.01
CMS1YLR003C YBR225WP38321 900 aa2.52□□□□□ -2.01
CMS1YLR003C MTC4P38335 694 aaKnown RBP2.52□□□□□ -2.01
CMS1YLR003C CCT6P39079 546 aa2.52□□□□□ -2.01
CMS1YLR003C PYK2P52489 506 aaKnown RBP2.52□□□□□ -2.01
CMS1YLR003C CAF130P53280 1122 aaPredicted RBP2.52□□□□□ -2.01
CMS1YLR003C BUD32P53323 261 aa2.52□□□□□ -2.01
CMS1YLR003C MHR1Q06630 226 aa2.52□□□□□ -2.01
CMS1YLR003C TSR2Q06672 205 aaKnown RBP2.52□□□□□ -2.01
CMS1YLR003C MED1Q12321 566 aa2.52□□□□□ -2.01
CMS1YLR003C RRI2Q12348 645 aa2.52□□□□□ -2.01
CMS1YLR003C MRP7P12687 371 aa2.51□□□□□ -2.01
CMS1YLR003C PAP1P29468 568 aaKnown RBP2.51□□□□□ -2.01
CMS1YLR003C IMP2'P32351 346 aa2.51□□□□□ -2.01
CMS1YLR003C MTR2P34232 184 aaKnown RBP2.51□□□□□ -2.01
CMS1YLR003C ECM15P35195 104 aa2.51□□□□□ -2.01
CMS1YLR003C MSR1P38714 643 aa2.51□□□□□ -2.01
CMS1YLR003C SPO22P40511 975 aa2.51□□□□□ -2.01
CMS1YLR003C ARF3P40994 183 aaRIP-Chip data2.51□□□□□ -2.01not detected
CMS1YLR003C PET130P47065 347 aa2.51□□□□□ -2.01
CMS1YLR003C APT1P49435 187 aaKnown RBP2.51□□□□□ -2.01
CMS1YLR003C ARE2P53629 642 aaKnown RBP2.51□□□□□ -2.01
CMS1YLR003C COQ9Q05779 260 aa2.51□□□□□ -2.01
CMS1YLR003C SDH5Q08230 162 aa2.51□□□□□ -2.01
CMS1YLR003C THP1Q08231 455 aa2.51□□□□□ -2.01
CMS1YLR003C ETT1Q08421 412 aaKnown RBP2.51□□□□□ -2.01
CMS1YLR003C AYT1Q12226 474 aa2.51□□□□□ -2.01
CMS1YLR003C AVL9Q12500 764 aa2.51□□□□□ -2.01
CMS1YLR003C HSH49Q99181 213 aaPredicted RBP2.51□□□□□ -2.01
CMS1YLR003C ARG3P05150 338 aa2.5□□□□□ -2.01
CMS1YLR003C PEP5P12868 1029 aa2.5□□□□□ -2.01
CMS1YLR003C SGV1P23293 657 aaKnown RBP2.5□□□□□ -2.01
CMS1YLR003C SPC110P32380 944 aa2.5□□□□□ -2.01
CMS1YLR003C VPS17P32913 551 aa2.5□□□□□ -2.01
CMS1YLR003C SIP2P34164 415 aaKnown RBP2.5□□□□□ -2.01
CMS1YLR003C VPS52P39904 641 aa2.5□□□□□ -2.01
CMS1YLR003C TIS11P47977 285 aa2.5□□□□□ -2.01
CMS1YLR003C MSC1Q03104 513 aa2.5□□□□□ -2.01
CMS1YLR003C RPC11Q04307 110 aaPredicted RBP2.5□□□□□ -2.01
CMS1YLR003C YPL272CQ08984 517 aa2.5□□□□□ -2.01
CMS1YLR003C RAV1P47104 1357 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms