RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR1	YKR101W	SNU56	Q03782	492 aa	Known RBP	4.62	□□□□□ -1.67
SIR1	YKR101W	ATG26	Q06321	1198 aa		4.62	□□□□□ -1.67
SIR1	YKR101W	YDL057W	Q07379	328 aa		4.62	□□□□□ -1.67
SIR1	YKR101W	CDC25	P04821	1589 aa		4.62	□□□□□ -1.67
SIR1	YKR101W	BI2	P03873	423 aa		4.62	□□□□□ -1.67
SIR1	YKR101W	HIP1	P06775	603 aa		4.62	□□□□□ -1.67
SIR1	YKR101W	PRP2	P20095	876 aa	Predicted RBP	4.62	□□□□□ -1.67
SIR1	YKR101W	POP2	P39008	433 aa		4.62	□□□□□ -1.67
SIR1	YKR101W	MBB1	P39534	108 aa		4.62	□□□□□ -1.67
SIR1	YKR101W	ATG27	P46989	271 aa		4.62	□□□□□ -1.67
SIR1	YKR101W	HOT1	Q03213	719 aa		4.62	□□□□□ -1.67
SIR1	YKR101W	ACL4	Q03771	387 aa		4.62	□□□□□ -1.67
SIR1	YKR101W	RRD2	Q12461	358 aa		4.62	□□□□□ -1.67
SIR1	YKR101W	ARG81	P05085	880 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	CBP1	P07252	654 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	COR1	P07256	457 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	SGV1	P23293	657 aa	Known RBP	4.61	□□□□□ -1.67
SIR1	YKR101W	LTV1	P34078	463 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	PIM1	P36775	1133 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	UBA4	P38820	440 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	VPS41	P38959	992 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	PAC2	P39937	518 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	YIL060W	P40519	144 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	ULP2	P40537	1034 aa	Predicted RBP	4.61	□□□□□ -1.67
SIR1	YKR101W	HXT9	P40885	567 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	ORC5	P50874	479 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	YGL108C	P53139	140 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	YNL058C	P53947	316 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	PDR8	Q06149	701 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
SIR1	YKR101W	MCH4	Q08268	501 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	DCI1	Q08558	271 aa		4.61	□□□□□ -1.67
SIR1	YKR101W	SPP41	P38904	1435 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	ADH5	P38113	351 aa	Known RBP	4.6	□□□□□ -1.67
SIR1	YKR101W	FET5	P43561	622 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	YGR149W	P48236	432 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	PKP2	P53170	491 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	TOF1	P53840	1238 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	PFA4	Q12006	378 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	VPS54	Q12071	889 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	TRM732	Q03496	1420 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	STH1	P32597	1359 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	RPN13	O13563	156 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	GEX1	P25596	615 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	MSS51	P32335	436 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	SIF2	P38262	535 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	ARN1	P38731	627 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	NAS2	P40555	220 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	COS5	P47187	383 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	YGL138C	P53122	345 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	YGR126W	P53274	230 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	FMP30	Q02883	468 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	COS7	Q07788	383 aa		4.6	□□□□□ -1.67
SIR1	YKR101W	SNF3	P10870	884 aa		4.59	□□□□□ -1.67
SIR1	YKR101W	DAP2	P18962	818 aa		4.59	□□□□□ -1.67
SIR1	YKR101W	GND1	P38720	489 aa	Known RBP	4.59	□□□□□ -1.67
SIR1	YKR101W	HEF3	P53978	1044 aa	Known RBP	4.59	□□□□□ -1.67
SIR1	YKR101W	SKO1	Q02100	647 aa		4.59	□□□□□ -1.67
SIR1	YKR101W	RRP45	Q05636	305 aa	Known RBP	4.59	□□□□□ -1.67
SIR1	YKR101W	BSP1	Q06604	576 aa		4.59	□□□□□ -1.67
SIR1	YKR101W	CDC45	Q08032	650 aa		4.59	□□□□□ -1.67
SIR1	YKR101W	TSC11	P40061	1430 aa		4.59	□□□□□ -1.68
SIR1	YKR101W	AFG1	P32317	509 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	RPN2	P32565	945 aa	Known RBP	4.58	□□□□□ -1.68
SIR1	YKR101W	YSW1	P38280	609 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	EOS1	P53938	366 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	IRC10	Q08118	586 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	SLK19	Q08581	821 aa	Known RBP	4.58	□□□□□ -1.68
SIR1	YKR101W	DNF1	P32660	1571 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	TY2B-LR1	P0C2J3	1770 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	TY2B-F	P0CX63	1770 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	TY2B-GR2	P0CX64	1770 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	TY2B-C	P25384	1770 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	TY2B-DR2	Q03494	1770 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	TY1B-DR1	Q03855	1755 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.58	□□□□□ -1.68
SIR1	YKR101W	TY2B-OR1	Q12113	1770 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	TY2B-DR1	Q12472	1770 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	TY2B-OR2	Q12501	1770 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	URA4	P20051	364 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	TRX1	P22217	103 aa	Known RBP	4.58	□□□□□ -1.68
SIR1	YKR101W	NIP100	P33420	868 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	TCM62	P38228	572 aa	Known RBP	4.58	□□□□□ -1.68
SIR1	YKR101W	TIF4631	P39935	952 aa	Known RBP	4.58	□□□□□ -1.68
SIR1	YKR101W	TAX4	P47030	604 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	BUD32	P53323	261 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
SIR1	YKR101W	RHO5	P53879	331 aa	Known RBP	4.58	□□□□□ -1.68
SIR1	YKR101W	YOR365C	Q08844	703 aa		4.58	□□□□□ -1.68
SIR1	YKR101W	GAL4	P04386	881 aa		4.57	□□□□□ -1.68
SIR1	YKR101W	RAD52	P06778	471 aa	Known RBP	4.57	□□□□□ -1.68
SIR1	YKR101W	VMA2	P16140	517 aa	Known RBP	4.57	□□□□□ -1.68
SIR1	YKR101W	CLN1	P20437	546 aa		4.57	□□□□□ -1.68
SIR1	YKR101W	CNA1	P23287	553 aa		4.57	□□□□□ -1.68
SIR1	YKR101W	RAD14	P28519	371 aa		4.57	□□□□□ -1.68
SIR1	YKR101W	SWH1	P35845	1188 aa		4.57	□□□□□ -1.68
SIR1	YKR101W	NTC20	P38302	140 aa	Predicted RBP	4.57	□□□□□ -1.68
SIR1	YKR101W	RIX1	P38883	763 aa	Predicted RBP	4.57	□□□□□ -1.68
SIR1	YKR101W	YHR210C	P38893	341 aa		4.57	□□□□□ -1.68
SIR1	YKR101W	SNG1	P46950	547 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms