RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C PRP6P19735 899 aaPredicted RBP11.27□□□□□ -0.61
YKR040CYKR040C SEC15P22224 910 aa11.27□□□□□ -0.61
YKR040CYKR040C BUB3P26449 341 aa11.27□□□□□ -0.61
YKR040CYKR040C LTV1P34078 463 aa11.27□□□□□ -0.61
YKR040CYKR040C YDR089WP38966 869 aa11.27□□□□□ -0.61
YKR040CYKR040C GGC1P38988 300 aa11.27□□□□□ -0.61
YKR040CYKR040C VMA13P41807 478 aaKnown RBP11.27□□□□□ -0.61
YKR040CYKR040C RIM21P48565 533 aa11.27□□□□□ -0.61
YKR040CYKR040C YLR030WQ07967 263 aa11.27□□□□□ -0.61
YKR040CYKR040C TMA46Q12000 345 aaKnown RBP11.27□□□□□ -0.61
YKR040CYKR040C TYR1P20049 452 aa11.26□□□□□ -0.61
YKR040CYKR040C HXT4P32467 576 aa11.26□□□□□ -0.61
YKR040CYKR040C YSC84P32793 468 aa11.26□□□□□ -0.61
YKR040CYKR040C CBF5P33322 483 aaKnown RBP RIP-Chip data11.26□□□□□ -0.61not detected
YKR040CYKR040C YBR032WP38223 100 aa11.26□□□□□ -0.61
YKR040CYKR040C HXT6P39003 570 aaKnown RBP11.26□□□□□ -0.61
YKR040CYKR040C HXT7P39004 570 aa11.26□□□□□ -0.61
YKR040CYKR040C MAD3P47074 515 aa11.26□□□□□ -0.61
YKR040CYKR040C YNR021WP53723 404 aaKnown RBP11.26□□□□□ -0.61
YKR040CYKR040C MRS2Q01926 470 aa11.26□□□□□ -0.61
YKR040CYKR040C HDA3Q06623 655 aa11.26□□□□□ -0.61
YKR040CYKR040C ENT4Q07872 247 aa11.26□□□□□ -0.61
YKR040CYKR040C HAL9Q12180 1030 aa11.26□□□□□ -0.61
YKR040CYKR040C NOP58Q12499 511 aaKnown RBP11.26□□□□□ -0.61
YKR040CYKR040C SEC39Q12745 709 aa11.26□□□□□ -0.61
YKR040CYKR040C AI3P03877 415 aa11.25□□□□□ -0.61
YKR040CYKR040C SFA1P32771 386 aa11.25□□□□□ -0.61
YKR040CYKR040C AXL2P38928 823 aa11.25□□□□□ -0.61
YKR040CYKR040C BEM4P39011 633 aa11.25□□□□□ -0.61
YKR040CYKR040C MET30P39014 640 aa11.25□□□□□ -0.61
YKR040CYKR040C YER158CP40095 573 aa11.25□□□□□ -0.61
YKR040CYKR040C AZF1P41696 914 aa11.25□□□□□ -0.61
YKR040CYKR040C SLM2P53955 656 aa11.25□□□□□ -0.61
YKR040CYKR040C YPL109CQ02981 657 aa11.25□□□□□ -0.61
YKR040CYKR040C CSF1Q12150 2958 aa11.25□□□□□ -0.61
YKR040CYKR040C LEU9Q12166 604 aaKnown RBP11.25□□□□□ -0.61
YKR040CYKR040C RPS21AP0C0V8 87 aaKnown RBP11.24□□□□□ -0.61
YKR040CYKR040C MSB1P21339 1137 aaKnown RBP11.24□□□□□ -0.61
YKR040CYKR040C RPS1AP33442 255 aaKnown RBP11.24□□□□□ -0.61
YKR040CYKR040C KKQ8P36004 724 aa11.24□□□□□ -0.61
YKR040CYKR040C RRN10P38204 145 aa11.24□□□□□ -0.61
YKR040CYKR040C SEC31P38968 1273 aaKnown RBP11.24□□□□□ -0.61
YKR040CYKR040C MNT3P40549 630 aa11.24□□□□□ -0.61
YKR040CYKR040C FHN1P53279 174 aa11.24□□□□□ -0.61
YKR040CYKR040C GTR2P53290 341 aa11.24□□□□□ -0.61
YKR040CYKR040C YML131WQ03102 365 aa11.24□□□□□ -0.61
YKR040CYKR040C YPL245WQ12179 454 aaKnown RBP11.24□□□□□ -0.61
YKR040CYKR040C CUP1-1P0CX80 61 aa11.23□□□□□ -0.61
YKR040CYKR040C CUP1-2P0CX81 61 aa11.23□□□□□ -0.61
YKR040CYKR040C IMG1P25626 169 aa11.23□□□□□ -0.61
YKR040CYKR040C COX13P32799 129 aa11.23□□□□□ -0.61
YKR040CYKR040C RMA1P36001 430 aaKnown RBP11.23□□□□□ -0.61
YKR040CYKR040C EAP1P36041 632 aaKnown RBP11.23□□□□□ -0.61
YKR040CYKR040C EHT1P38295 451 aa11.23□□□□□ -0.61
YKR040CYKR040C CAB2P40506 365 aa11.23□□□□□ -0.61
YKR040CYKR040C SEC27P41811 889 aaKnown RBP11.23□□□□□ -0.61
YKR040CYKR040C ALR2P43553 858 aa11.23□□□□□ -0.61
YKR040CYKR040C YGL176CP46945 554 aa11.23□□□□□ -0.61
YKR040CYKR040C PRO2P54885 456 aaKnown RBP11.23□□□□□ -0.61
YKR040CYKR040C GAS3Q03655 524 aa11.23□□□□□ -0.61
YKR040CYKR040C TVP15Q03860 143 aa11.23□□□□□ -0.61
YKR040CYKR040C ROY1Q04847 553 aa11.23□□□□□ -0.61
YKR040CYKR040C YOL019WQ08157 551 aa11.23□□□□□ -0.61
YKR040CYKR040C GPB1Q08886 897 aa11.23□□□□□ -0.61
YKR040CYKR040C PNO1Q99216 274 aaKnown RBP11.23□□□□□ -0.61
YKR040CYKR040C AGP1P25376 633 aa11.22□□□□□ -0.61
YKR040CYKR040C PRO1P32264 428 aa11.22□□□□□ -0.61
YKR040CYKR040C PDR3P33200 976 aa11.22□□□□□ -0.61
YKR040CYKR040C TAF14P35189 244 aa11.22□□□□□ -0.61
YKR040CYKR040C BMT2P38278 337 aa11.22□□□□□ -0.61
YKR040CYKR040C UBS1P38290 277 aa11.22□□□□□ -0.61
YKR040CYKR040C GCD10P41814 478 aa11.22□□□□□ -0.61
YKR040CYKR040C YPT32P51996 222 aaKnown RBP11.22□□□□□ -0.61
YKR040CYKR040C IRC13Q08630 104 aa11.22□□□□□ -0.61
YKR040CYKR040C GUP2Q08929 609 aa11.22□□□□□ -0.61
YKR040CYKR040C YLR049CQ12110 428 aa11.22□□□□□ -0.61
YKR040CYKR040C MHT1Q12525 324 aa11.22□□□□□ -0.61
YKR040CYKR040C TY4A-HQ6Q5P6 413 aa11.22□□□□□ -0.61
YKR040CYKR040C YMR085WP0CF18 432 aa11.21□□□□□ -0.61
YKR040CYKR040C YCR006CP25350 157 aa11.21□□□□□ -0.61
YKR040CYKR040C ADE1P27616 306 aa11.21□□□□□ -0.61
YKR040CYKR040C SHU2P38957 223 aa11.21□□□□□ -0.61
YKR040CYKR040C APQ12P40532 138 aa11.21□□□□□ -0.61
YKR040CYKR040C FKH2P41813 862 aa11.21□□□□□ -0.61
YKR040CYKR040C SPG5P42933 373 aa11.21□□□□□ -0.61
YKR040CYKR040C YJR154WP47181 346 aa11.21□□□□□ -0.61
YKR040CYKR040C YGR250CP53316 781 aaKnown RBP11.21□□□□□ -0.61
YKR040CYKR040C NOP19P53317 196 aaPredicted RBP11.21□□□□□ -0.61
YKR040CYKR040C OMS1Q06668 471 aa11.21□□□□□ -0.61
YKR040CYKR040C YOL073CQ08232 322 aa11.21□□□□□ -0.61
YKR040CYKR040C RIP1P08067 215 aa11.2□□□□□ -0.62
YKR040CYKR040C COS2P0CX12 379 aa11.2□□□□□ -0.62
YKR040CYKR040C COS3P0CX13 379 aa11.2□□□□□ -0.62
YKR040CYKR040C SGV1P23293 657 aaKnown RBP11.2□□□□□ -0.62
YKR040CYKR040C TRX3P25372 127 aa11.2□□□□□ -0.62
YKR040CYKR040C GBP2P25555 427 aaKnown RBP RIP-Chip data11.2□□□□□ -0.62not detected
YKR040CYKR040C SCS2P40075 244 aaKnown RBP11.2□□□□□ -0.62
YKR040CYKR040C COS4P43542 379 aa11.2□□□□□ -0.62
YKR040CYKR040C MET12P46151 657 aa11.2□□□□□ -0.62
YKR040CYKR040C BCY1P07278 416 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms