RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W USA1Q03714 838 aa4.11□□□□□ -1.75
MSN4YKL062W YLR297WQ05899 129 aa4.11□□□□□ -1.75
MSN4YKL062W AIM6Q07716 390 aa4.11□□□□□ -1.75
MSN4YKL062W NUS1Q12063 375 aa4.11□□□□□ -1.75
MSN4YKL062W TFB5Q3E7C1 72 aaPredicted RBP4.11□□□□□ -1.75
MSN4YKL062W GCD2P12754 651 aaPredicted RBP4.1□□□□□ -1.75
MSN4YKL062W BUD14P27637 709 aa4.1□□□□□ -1.75
MSN4YKL062W FAA1P30624 700 aaKnown RBP4.1□□□□□ -1.75
MSN4YKL062W CBF5P33322 483 aaKnown RBP RIP-Chip data4.1□□□□□ -1.75not detected
MSN4YKL062W KDX1P36005 433 aa4.1□□□□□ -1.75
MSN4YKL062W GEX2P36173 615 aa4.1□□□□□ -1.75
MSN4YKL062W SLM4P38247 162 aa4.1□□□□□ -1.75
MSN4YKL062W SMC3P47037 1230 aa4.1□□□□□ -1.75
MSN4YKL062W YGL138CP53122 345 aa4.1□□□□□ -1.75
MSN4YKL062W PNC1P53184 216 aaKnown RBP4.1□□□□□ -1.75
MSN4YKL062W CGR1P53188 120 aa4.1□□□□□ -1.75
MSN4YKL062W RRP46P53256 223 aaPredicted RBP4.1□□□□□ -1.75
MSN4YKL062W MPP6P53725 186 aaPredicted RBP4.1□□□□□ -1.75
MSN4YKL062W TRS31Q03337 283 aa4.1□□□□□ -1.75
MSN4YKL062W YDR239CQ03780 787 aa4.1□□□□□ -1.75
MSN4YKL062W ARG7Q04728 441 aa4.1□□□□□ -1.75
MSN4YKL062W RTN1Q04947 295 aaKnown RBP4.1□□□□□ -1.75
MSN4YKL062W VPS38Q05919 439 aa4.1□□□□□ -1.75
MSN4YKL062W RAD61Q99359 647 aa4.1□□□□□ -1.75
MSN4YKL062W JIP3O13555 125 aa4.09□□□□□ -1.75
MSN4YKL062W HXK2P04807 486 aaKnown RBP4.09□□□□□ -1.75
MSN4YKL062W STE3P06783 470 aa4.09□□□□□ -1.75
MSN4YKL062W WHI2P12611 486 aa4.09□□□□□ -1.75
MSN4YKL062W BOS1P25385 244 aa4.09□□□□□ -1.75
MSN4YKL062W KES1P35844 434 aaKnown RBP4.09□□□□□ -1.75
MSN4YKL062W CMC1P36064 111 aa4.09□□□□□ -1.75
MSN4YKL062W YKL023WP36103 277 aaKnown RBP4.09□□□□□ -1.75
MSN4YKL062W SIP3P38717 1229 aa4.09□□□□□ -1.75
MSN4YKL062W BZZ1P38822 633 aa4.09□□□□□ -1.75
MSN4YKL062W MLH1P38920 769 aa4.09□□□□□ -1.75
MSN4YKL062W STN1P38960 494 aa4.09□□□□□ -1.75
MSN4YKL062W FUN12P39730 1002 aaKnown RBP4.09□□□□□ -1.75
MSN4YKL062W VFA1P40080 203 aa4.09□□□□□ -1.75
MSN4YKL062W YTA12P40341 825 aa4.09□□□□□ -1.75
MSN4YKL062W ALG5P40350 334 aa4.09□□□□□ -1.75
MSN4YKL062W ULP2P40537 1034 aaPredicted RBP4.09□□□□□ -1.75
MSN4YKL062W COQ6P53318 479 aa4.09□□□□□ -1.75
MSN4YKL062W FMP30Q02883 468 aa4.09□□□□□ -1.75
MSN4YKL062W YML037CQ03703 340 aa4.09□□□□□ -1.75
MSN4YKL062W VPS64Q03944 604 aa4.09□□□□□ -1.75
MSN4YKL062W YDR061WQ12298 539 aa4.09□□□□□ -1.75
MSN4YKL062W YBL111CQ3E7Y5 667 aa4.09□□□□□ -1.75
MSN4YKL062W STE2D6VTK4 431 aa4.09□□□□□ -1.76
MSN4YKL062W GAL80P04387 435 aa4.09□□□□□ -1.76
MSN4YKL062W RPL3P14126 387 aaKnown RBP4.09□□□□□ -1.76
MSN4YKL062W UBA1P22515 1024 aaKnown RBP4.09□□□□□ -1.76
MSN4YKL062W VPS34P22543 875 aa4.09□□□□□ -1.76
MSN4YKL062W HXT3P32466 567 aaKnown RBP4.09□□□□□ -1.76
MSN4YKL062W PFF1P38244 976 aa4.09□□□□□ -1.76
MSN4YKL062W STB5P38699 743 aa4.09□□□□□ -1.76
MSN4YKL062W YHB1P39676 399 aaKnown RBP4.09□□□□□ -1.76
MSN4YKL062W SSO2P39926 295 aa4.09□□□□□ -1.76
MSN4YKL062W SCC4P40090 624 aa4.09□□□□□ -1.76
MSN4YKL062W MAF1P41910 395 aa4.09□□□□□ -1.76
MSN4YKL062W GCD14P46959 383 aaPredicted RBP4.09□□□□□ -1.76
MSN4YKL062W PET130P47065 347 aa4.09□□□□□ -1.76
MSN4YKL062W YGL036WP53185 909 aaPredicted RBP4.09□□□□□ -1.76
MSN4YKL062W IMO32P53219 342 aa4.09□□□□□ -1.76
MSN4YKL062W MRPS17Q03246 237 aaPredicted RBP4.09□□□□□ -1.76
MSN4YKL062W RPN9Q04062 393 aaKnown RBP4.09□□□□□ -1.76
MSN4YKL062W CSI1Q04368 295 aa4.09□□□□□ -1.76
MSN4YKL062W SSQ1Q05931 657 aaPredicted RBP4.09□□□□□ -1.76
MSN4YKL062W BCP1Q06338 283 aa4.09□□□□□ -1.76
MSN4YKL062W YML133CQ03099 1374 aa4.09□□□□□ -1.76
MSN4YKL062W YLL066CQ99208 1374 aa4.09□□□□□ -1.76
MSN4YKL062W CDC36P06100 191 aaPredicted RBP4.08□□□□□ -1.76
MSN4YKL062W HIP1P06775 603 aa4.08□□□□□ -1.76
MSN4YKL062W MSS116P15424 664 aaKnown RBP4.08□□□□□ -1.76
MSN4YKL062W DAL81P21657 970 aa4.08□□□□□ -1.76
MSN4YKL062W ITR1P30605 584 aa4.08□□□□□ -1.76
MSN4YKL062W RML2P32611 393 aa4.08□□□□□ -1.76
MSN4YKL062W YME2P32843 850 aa4.08□□□□□ -1.76
MSN4YKL062W YKL070WP36087 169 aa4.08□□□□□ -1.76
MSN4YKL062W MRPL4P36517 319 aa4.08□□□□□ -1.76
MSN4YKL062W STV1P37296 890 aa4.08□□□□□ -1.76
MSN4YKL062W ATP3P38077 311 aaKnown RBP4.08□□□□□ -1.76
MSN4YKL062W YPT10P38146 199 aa4.08□□□□□ -1.76
MSN4YKL062W MSS2P40990 351 aa4.08□□□□□ -1.76
MSN4YKL062W ECM27P47144 725 aa4.08□□□□□ -1.76
MSN4YKL062W FMS1P50264 508 aa4.08□□□□□ -1.76
MSN4YKL062W TIM21P53220 239 aa4.08□□□□□ -1.76
MSN4YKL062W TWF1P53250 332 aa4.08□□□□□ -1.76
MSN4YKL062W KTR6P54070 446 aa4.08□□□□□ -1.76
MSN4YKL062W HOF1Q05080 669 aa4.08□□□□□ -1.76
MSN4YKL062W ETT1Q08421 412 aaKnown RBP4.08□□□□□ -1.76
MSN4YKL062W SFG1Q12507 346 aa4.08□□□□□ -1.76
MSN4YKL062W NBL1Q3E7Y6 73 aa4.08□□□□□ -1.76
MSN4YKL062W CBP1P07252 654 aa4.07□□□□□ -1.76
MSN4YKL062W KSS1P14681 368 aa4.07□□□□□ -1.76
MSN4YKL062W FUS3P16892 353 aaKnown RBP4.07□□□□□ -1.76
MSN4YKL062W RPI1P23250 407 aaKnown RBP4.07□□□□□ -1.76
MSN4YKL062W YCR061WP25639 631 aa4.07□□□□□ -1.76
MSN4YKL062W ERG1P32476 496 aaKnown RBP4.07□□□□□ -1.76
MSN4YKL062W SUA5P32579 426 aa4.07□□□□□ -1.76
MSN4YKL062W WBP1P33767 430 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms