RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W VAC8P39968 578 aa6.25□□□□□ -1.41
GEF1YJR040W YAT2P40017 923 aa6.25□□□□□ -1.41
GEF1YJR040W YJL070CP40361 888 aa6.25□□□□□ -1.41
GEF1YJR040W ATM1P40416 690 aa6.25□□□□□ -1.41
GEF1YJR040W FAF1P40546 346 aaPredicted RBP6.25□□□□□ -1.41
GEF1YJR040W APS3P47064 194 aa6.25□□□□□ -1.41
GEF1YJR040W GCN5Q03330 439 aa6.25□□□□□ -1.41
GEF1YJR040W HER2Q03557 464 aa6.25□□□□□ -1.41
GEF1YJR040W MLC2Q06580 163 aa6.25□□□□□ -1.41
GEF1YJR040W SLD7Q08457 257 aa6.25□□□□□ -1.41
GEF1YJR040W MUM3Q08750 479 aa6.25□□□□□ -1.41
GEF1YJR040W TSC13Q99190 310 aa6.25□□□□□ -1.41
GEF1YJR040W HIS1P00498 297 aaKnown RBP6.24□□□□□ -1.41
GEF1YJR040W MIS1P09440 975 aaKnown RBP6.24□□□□□ -1.41
GEF1YJR040W PMA2P19657 947 aa6.24□□□□□ -1.41
GEF1YJR040W DBP3P20447 523 aaKnown RBP6.24□□□□□ -1.41
GEF1YJR040W CCA1P21269 546 aa6.24□□□□□ -1.41
GEF1YJR040W PMI40P29952 429 aaKnown RBP6.24□□□□□ -1.41
GEF1YJR040W NAT2P37293 288 aa6.24□□□□□ -1.41
GEF1YJR040W RIM11P38615 370 aa6.24□□□□□ -1.41
GEF1YJR040W YHR182WP38870 785 aa6.24□□□□□ -1.41
GEF1YJR040W JLP2P40206 208 aa6.24□□□□□ -1.41
GEF1YJR040W YIR016WP40572 265 aa6.24□□□□□ -1.41
GEF1YJR040W GLG2P47011 380 aa6.24□□□□□ -1.41
GEF1YJR040W HPT1Q04178 221 aaKnown RBP6.24□□□□□ -1.41
GEF1YJR040W GAL83Q04739 417 aa6.24□□□□□ -1.41
GEF1YJR040W GMC2Q06201 188 aa6.24□□□□□ -1.41
GEF1YJR040W RSC2Q06488 889 aa6.24□□□□□ -1.41
GEF1YJR040W HRK1Q08732 759 aaKnown RBP6.24□□□□□ -1.41
GEF1YJR040W NDJ1Q12366 352 aa6.24□□□□□ -1.41
GEF1YJR040W TRP3P00937 484 aa6.24□□□□□ -1.41
GEF1YJR040W MRPL33P20084 86 aa6.24□□□□□ -1.41
GEF1YJR040W AMD2P22580 549 aa6.24□□□□□ -1.41
GEF1YJR040W RVS161P25343 265 aaKnown RBP6.24□□□□□ -1.41
GEF1YJR040W PTC6P25646 442 aa6.24□□□□□ -1.41
GEF1YJR040W NDI1P32340 513 aa6.24□□□□□ -1.41
GEF1YJR040W RIM1P32445 135 aaKnown RBP6.24□□□□□ -1.41
GEF1YJR040W ISF1P32488 338 aa6.24□□□□□ -1.41
GEF1YJR040W MEI5P32489 222 aa6.24□□□□□ -1.41
GEF1YJR040W TAF14P35189 244 aa6.24□□□□□ -1.41
GEF1YJR040W MRPL40P36534 297 aa6.24□□□□□ -1.41
GEF1YJR040W SIF2P38262 535 aa6.24□□□□□ -1.41
GEF1YJR040W ARN1P38731 627 aa6.24□□□□□ -1.41
GEF1YJR040W EGD2P38879 174 aaKnown RBP6.24□□□□□ -1.41
GEF1YJR040W AGP3P43548 558 aa6.24□□□□□ -1.41
GEF1YJR040W YNL033WP53964 284 aa6.24□□□□□ -1.41
GEF1YJR040W YNL019CP53975 284 aa6.24□□□□□ -1.41
GEF1YJR040W LSM3P57743 89 aaKnown RBP6.24□□□□□ -1.41
GEF1YJR040W MET14Q02196 202 aa6.24□□□□□ -1.41
GEF1YJR040W HSP31Q04432 237 aa6.24□□□□□ -1.41
GEF1YJR040W CRN1Q06440 651 aa6.24□□□□□ -1.41
GEF1YJR040W DTD1Q07648 150 aaKnown RBP6.24□□□□□ -1.41
GEF1YJR040W PGC1Q08959 321 aa6.24□□□□□ -1.41
GEF1YJR040W SLF1Q12034 447 aaKnown RBP6.24□□□□□ -1.41
GEF1YJR040W DCP1Q12517 231 aaPredicted RBP6.24□□□□□ -1.41
GEF1YJR040W IPP1P00817 287 aaKnown RBP6.23□□□□□ -1.41
GEF1YJR040W GLN4P13188 809 aaKnown RBP6.23□□□□□ -1.41
GEF1YJR040W ABF1P14164 731 aa6.23□□□□□ -1.41
GEF1YJR040W MET16P18408 261 aaPredicted RBP6.23□□□□□ -1.41
GEF1YJR040W SAR1P20606 190 aaKnown RBP6.23□□□□□ -1.41
GEF1YJR040W YBR056WP38081 501 aa6.23□□□□□ -1.41
GEF1YJR040W MNN9P39107 395 aaKnown RBP6.23□□□□□ -1.41
GEF1YJR040W EDC3P39998 551 aaKnown RBP6.23□□□□□ -1.41
GEF1YJR040W NNT1Q05874 261 aa6.23□□□□□ -1.41
GEF1YJR040W ECM38Q05902 660 aaPredicted RBP6.23□□□□□ -1.41
GEF1YJR040W SNU23Q12368 194 aaPredicted RBP6.23□□□□□ -1.41
GEF1YJR040W TPK2P06245 380 aa6.22□□□□□ -1.41
GEF1YJR040W BCY1P07278 416 aaKnown RBP6.22□□□□□ -1.41
GEF1YJR040W MSS18P08593 268 aa6.22□□□□□ -1.41
GEF1YJR040W KIN3P22209 435 aa6.22□□□□□ -1.41
GEF1YJR040W PDE1P22434 369 aa6.22□□□□□ -1.41
GEF1YJR040W ATP7P30902 174 aa6.22□□□□□ -1.41
GEF1YJR040W ASF2P32448 525 aaPredicted RBP6.22□□□□□ -1.41
GEF1YJR040W STP2P38704 541 aa6.22□□□□□ -1.41
GEF1YJR040W MAL11P53048 616 aa6.22□□□□□ -1.41
GEF1YJR040W ENT5Q03769 411 aaKnown RBP6.22□□□□□ -1.41
GEF1YJR040W RQC1Q05468 723 aaKnown RBP6.22□□□□□ -1.41
GEF1YJR040W HEL2Q05580 639 aaKnown RBP6.22□□□□□ -1.41
GEF1YJR040W BSP1Q06604 576 aa6.22□□□□□ -1.41
GEF1YJR040W HDA3Q06623 655 aa6.22□□□□□ -1.41
GEF1YJR040W BUD20Q08004 166 aaPredicted RBP6.22□□□□□ -1.41
GEF1YJR040W YOL159CQ08300 171 aa6.22□□□□□ -1.41
GEF1YJR040W PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
GEF1YJR040W CMR1Q12510 522 aaKnown RBP6.22□□□□□ -1.41
GEF1YJR040W TPK3P05986 398 aa6.22□□□□□ -1.41
GEF1YJR040W FBA1P14540 359 aaKnown RBP6.22□□□□□ -1.41
GEF1YJR040W ATP12P22135 325 aa6.22□□□□□ -1.41
GEF1YJR040W HXT2P23585 541 aa6.22□□□□□ -1.41
GEF1YJR040W PPQ1P32945 549 aa6.22□□□□□ -1.41
GEF1YJR040W SGE1P33335 543 aa6.22□□□□□ -1.41
GEF1YJR040W ARA1P38115 344 aa6.22□□□□□ -1.41
GEF1YJR040W YHL041WP38730 149 aa6.22□□□□□ -1.41
GEF1YJR040W YHR131CP38835 850 aa6.22□□□□□ -1.41
GEF1YJR040W PEX28P38848 579 aa6.22□□□□□ -1.41
GEF1YJR040W CYC2P38909 366 aa6.22□□□□□ -1.41
GEF1YJR040W YEL028WP39989 153 aa6.22□□□□□ -1.41
GEF1YJR040W MOB1P40484 314 aa6.22□□□□□ -1.41
GEF1YJR040W OYE3P41816 400 aaPredicted RBP6.22□□□□□ -1.41
GEF1YJR040W UFE1P41834 346 aa6.22□□□□□ -1.41
GEF1YJR040W FYV6P53913 173 aa6.22□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 80 ms