RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene SDS3, Length 984 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS3	YIL084C	SNU114	P36048	1008 aa	Known RBP	4.17	□□□□□ -1.74
SDS3	YIL084C	NOP4	P37838	685 aa	Known RBP	4.17	□□□□□ -1.74
SDS3	YIL084C	VRG4	P40107	337 aa		4.17	□□□□□ -1.74
SDS3	YIL084C	SAD1	P43589	448 aa		4.17	□□□□□ -1.74
SDS3	YIL084C	DIA3	P52290	468 aa		4.17	□□□□□ -1.74
SDS3	YIL084C	ASI1	P54074	624 aa		4.17	□□□□□ -1.74
SDS3	YIL084C	RPL15B	P54780	204 aa	Predicted RBP	4.17	□□□□□ -1.74
SDS3	YIL084C	CAC2	Q04199	468 aa		4.17	□□□□□ -1.74
SDS3	YIL084C	SPH1	Q06160	661 aa		4.17	□□□□□ -1.74
SDS3	YIL084C	MCP2	Q06567	569 aa		4.17	□□□□□ -1.74
SDS3	YIL084C	ATG9	Q12142	997 aa		4.17	□□□□□ -1.74
SDS3	YIL084C	HER1	Q12276	1246 aa		4.17	□□□□□ -1.74
SDS3	YIL084C	RPS19A	P07280	144 aa	Known RBP	4.16	□□□□□ -1.74
SDS3	YIL084C	RPS19B	P07281	144 aa	Predicted RBP	4.16	□□□□□ -1.74
SDS3	YIL084C	SNA3	P14359	133 aa		4.16	□□□□□ -1.74
SDS3	YIL084C	AAC3	P18238	307 aa		4.16	□□□□□ -1.74
SDS3	YIL084C	COQ1	P18900	473 aa		4.16	□□□□□ -1.74
SDS3	YIL084C	AIM17	P23180	465 aa	Known RBP	4.16	□□□□□ -1.74
SDS3	YIL084C	CLB2	P24869	491 aa		4.16	□□□□□ -1.74
SDS3	YIL084C	ADH7	P25377	361 aa		4.16	□□□□□ -1.74
SDS3	YIL084C	AUR1	P36107	401 aa	Predicted RBP	4.16	□□□□□ -1.74
SDS3	YIL084C	YIR016W	P40572	265 aa		4.16	□□□□□ -1.74
SDS3	YIL084C	DUO1	P53168	247 aa	Known RBP	4.16	□□□□□ -1.74
SDS3	YIL084C	ART5	P53244	586 aa	Known RBP	4.16	□□□□□ -1.74
SDS3	YIL084C	SCW4	P53334	386 aa	Known RBP	4.16	□□□□□ -1.74
SDS3	YIL084C	YKU80	Q04437	629 aa		4.16	□□□□□ -1.74
SDS3	YIL084C	ARP10	Q04549	284 aa		4.16	□□□□□ -1.74
SDS3	YIL084C	GSH2	Q08220	491 aa		4.16	□□□□□ -1.74
SDS3	YIL084C	RGT2	Q12300	763 aa		4.16	□□□□□ -1.74
SDS3	YIL084C	NOP58	Q12499	511 aa	Known RBP	4.16	□□□□□ -1.74
SDS3	YIL084C	RAD61	Q99359	647 aa		4.16	□□□□□ -1.74
SDS3	YIL084C	YLR422W	Q06409	1932 aa		4.16	□□□□□ -1.74
SDS3	YIL084C	SEC53	P07283	254 aa	Known RBP	4.15	□□□□□ -1.75
SDS3	YIL084C	PWP1	P21304	576 aa	Known RBP	4.15	□□□□□ -1.75
SDS3	YIL084C	YCK1	P23291	538 aa		4.15	□□□□□ -1.75
SDS3	YIL084C	ASK1	P35734	292 aa		4.15	□□□□□ -1.75
SDS3	YIL084C	DRE2	P36152	348 aa		4.15	□□□□□ -1.75
SDS3	YIL084C	RFC1	P38630	861 aa	Known RBP	4.15	□□□□□ -1.75
SDS3	YIL084C	ALD5	P40047	520 aa	Known RBP	4.15	□□□□□ -1.75
SDS3	YIL084C	GAT1	P43574	510 aa		4.15	□□□□□ -1.75
SDS3	YIL084C	MDV1	P47025	714 aa		4.15	□□□□□ -1.75
SDS3	YIL084C	STR3	P53101	465 aa	Known RBP	4.15	□□□□□ -1.75
SDS3	YIL084C	PIB2	P53191	635 aa		4.15	□□□□□ -1.75
SDS3	YIL084C	YTP1	P53584	459 aa		4.15	□□□□□ -1.75
SDS3	YIL084C	BUD22	Q04347	519 aa	Known RBP	4.15	□□□□□ -1.75
SDS3	YIL084C	UTP21	Q06078	939 aa	Predicted RBP	4.15	□□□□□ -1.75
SDS3	YIL084C	LEU9	Q12166	604 aa	Known RBP	4.15	□□□□□ -1.75
SDS3	YIL084C	NCB2	Q92317	146 aa		4.15	□□□□□ -1.75
SDS3	YIL084C	RPB8	P20436	146 aa		4.14	□□□□□ -1.75
SDS3	YIL084C	IMP2'	P32351	346 aa		4.14	□□□□□ -1.75
SDS3	YIL084C	MIA40	P36046	403 aa		4.14	□□□□□ -1.75
SDS3	YIL084C	VPS45	P38932	577 aa		4.14	□□□□□ -1.75
SDS3	YIL084C	UPF3	P48412	387 aa	Known RBP	4.14	□□□□□ -1.75
SDS3	YIL084C	YGL242C	P53066	181 aa		4.14	□□□□□ -1.75
SDS3	YIL084C	YGR127W	P53275	312 aa		4.14	□□□□□ -1.75
SDS3	YIL084C	YNL234W	P53857	426 aa		4.14	□□□□□ -1.75
SDS3	YIL084C	CTL1	Q03220	320 aa	Known RBP	4.14	□□□□□ -1.75
SDS3	YIL084C	ECI1	Q05871	280 aa		4.14	□□□□□ -1.75
SDS3	YIL084C	UBX3	Q12229	455 aa		4.14	□□□□□ -1.75
SDS3	YIL084C	YIH1	P25637	258 aa		4.13	□□□□□ -1.75
SDS3	YIL084C	GAC1	P28006	793 aa		4.13	□□□□□ -1.75
SDS3	YIL084C	DBP8	P38719	431 aa		4.13	□□□□□ -1.75
SDS3	YIL084C	ELO1	P39540	310 aa		4.13	□□□□□ -1.75
SDS3	YIL084C	FLC2	P39719	783 aa		4.13	□□□□□ -1.75
SDS3	YIL084C	SGF73	P53165	657 aa		4.13	□□□□□ -1.75
SDS3	YIL084C	BOP3	P53958	396 aa		4.13	□□□□□ -1.75
SDS3	YIL084C	YLR112W	Q12130	139 aa		4.13	□□□□□ -1.75
SDS3	YIL084C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
SDS3	YIL084C	PDR18	P53756	1333 aa		4.13	□□□□□ -1.75
SDS3	YIL084C	ARG81	P05085	880 aa		4.12	□□□□□ -1.75
SDS3	YIL084C	YCP4	P25349	247 aa	Known RBP	4.12	□□□□□ -1.75
SDS3	YIL084C	POL4	P25615	582 aa		4.12	□□□□□ -1.75
SDS3	YIL084C	SYN8	P31377	255 aa		4.12	□□□□□ -1.75
SDS3	YIL084C	FAR3	P46671	204 aa		4.12	□□□□□ -1.75
SDS3	YIL084C	LYS20	P48570	428 aa	Known RBP	4.12	□□□□□ -1.75
SDS3	YIL084C	FMS1	P50264	508 aa		4.12	□□□□□ -1.75
SDS3	YIL084C	IZH1	Q03419	316 aa		4.12	□□□□□ -1.75
SDS3	YIL084C	DPB4	Q04603	196 aa	Known RBP	4.12	□□□□□ -1.75
SDS3	YIL084C	YOL159C	Q08300	171 aa		4.12	□□□□□ -1.75
SDS3	YIL084C	ETT1	Q08421	412 aa	Known RBP	4.12	□□□□□ -1.75
SDS3	YIL084C	GEP3	Q08622	556 aa		4.12	□□□□□ -1.75
SDS3	YIL084C	RCN2	Q12044	265 aa		4.12	□□□□□ -1.75
SDS3	YIL084C	NMD4	Q12129	218 aa		4.12	□□□□□ -1.75
SDS3	YIL084C	LAA1	P39526	2014 aa		4.12	□□□□□ -1.75
SDS3	YIL084C	IRA2	P19158	3079 aa		4.12	□□□□□ -1.75
SDS3	YIL084C	TEL1	P38110	2787 aa		4.12	□□□□□ -1.75
SDS3	YIL084C	ARD1	P07347	238 aa	Predicted RBP	4.11	□□□□□ -1.75
SDS3	YIL084C	RPL40A	P0CH08	128 aa	Known RBP	4.11	□□□□□ -1.75
SDS3	YIL084C	RPL40B	P0CH09	128 aa	Known RBP	4.11	□□□□□ -1.75
SDS3	YIL084C	HSC82	P15108	705 aa	Known RBP	4.11	□□□□□ -1.75
SDS3	YIL084C	KAR3	P17119	729 aa		4.11	□□□□□ -1.75
SDS3	YIL084C	PUP3	P25451	205 aa	Known RBP	4.11	□□□□□ -1.75
SDS3	YIL084C	ADK2	P26364	225 aa		4.11	□□□□□ -1.75
SDS3	YIL084C	YKL097C	P34245	136 aa		4.11	□□□□□ -1.75
SDS3	YIL084C	MNN2	P38069	597 aa		4.11	□□□□□ -1.75
SDS3	YIL084C	TSC10	P38342	320 aa		4.11	□□□□□ -1.75
SDS3	YIL084C	GND1	P38720	489 aa	Known RBP	4.11	□□□□□ -1.75
SDS3	YIL084C	PTR3	P43606	678 aa		4.11	□□□□□ -1.75
SDS3	YIL084C	MLC1	P53141	149 aa		4.11	□□□□□ -1.75
SDS3	YIL084C	LIF1	P53150	421 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 96.6 ms