RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W NNF2P53253 936 aa5.48□□□□□ -1.53
VMA16YHR026W DOS2P54858 310 aa5.48□□□□□ -1.53
VMA16YHR026W ELP3Q02908 557 aaKnown RBP5.48□□□□□ -1.53
VMA16YHR026W TFB2Q02939 513 aa5.48□□□□□ -1.53
VMA16YHR026W YDR132CQ03900 495 aa5.48□□□□□ -1.53
VMA16YHR026W ATG10Q07879 167 aa5.48□□□□□ -1.53
VMA16YHR026W NRT1Q08485 598 aa5.48□□□□□ -1.53
VMA16YHR026W GPN2Q08726 347 aaPredicted RBP5.48□□□□□ -1.53
VMA16YHR026W PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
VMA16YHR026W HFA1P32874 2273 aa5.48□□□□□ -1.53
VMA16YHR026W UTP20P35194 2493 aaKnown RBP5.47□□□□□ -1.53
VMA16YHR026W EXO70P19658 623 aa5.47□□□□□ -1.53
VMA16YHR026W PWP1P21304 576 aaKnown RBP5.47□□□□□ -1.53
VMA16YHR026W EMC1P25574 760 aa5.47□□□□□ -1.53
VMA16YHR026W RIM1P32445 135 aaKnown RBP5.47□□□□□ -1.53
VMA16YHR026W SSE1P32589 693 aaKnown RBP5.47□□□□□ -1.53
VMA16YHR026W APM3P38153 483 aa5.47□□□□□ -1.53
VMA16YHR026W YBP1P38315 674 aa5.47□□□□□ -1.53
VMA16YHR026W RFC3P38629 340 aa5.47□□□□□ -1.53
VMA16YHR026W PRM9P39551 298 aa5.47□□□□□ -1.53
VMA16YHR026W OAF1P39720 1047 aaPredicted RBP5.47□□□□□ -1.53
VMA16YHR026W DPH1P40487 425 aaKnown RBP5.47□□□□□ -1.53
VMA16YHR026W RLP7P40693 322 aaKnown RBP5.47□□□□□ -1.53
VMA16YHR026W ERR3P42222 437 aa5.47□□□□□ -1.53
VMA16YHR026W ARC1P46672 376 aaKnown RBP5.47□□□□□ -1.53
VMA16YHR026W PBP1P53297 722 aaKnown RBP5.47□□□□□ -1.53
VMA16YHR026W BIO4P53630 237 aa5.47□□□□□ -1.53
VMA16YHR026W FMN1Q03778 218 aa5.47□□□□□ -1.53
VMA16YHR026W YAP6Q03935 383 aa5.47□□□□□ -1.53
VMA16YHR026W ADY3Q07732 790 aa5.47□□□□□ -1.53
VMA16YHR026W AAD4Q07747 329 aa5.47□□□□□ -1.53
VMA16YHR026W YOL073CQ08232 322 aa5.47□□□□□ -1.53
VMA16YHR026W AAD15Q08361 143 aa5.47□□□□□ -1.53
VMA16YHR026W PEX11Q12462 236 aa5.47□□□□□ -1.53
VMA16YHR026W KCS1Q12494 1050 aa5.47□□□□□ -1.53
VMA16YHR026W NOT5Q12514 560 aaPredicted RBP5.47□□□□□ -1.53
VMA16YHR026W SEC39Q12745 709 aa5.47□□□□□ -1.53
VMA16YHR026W EFG1Q3E705 233 aaKnown RBP5.47□□□□□ -1.53
VMA16YHR026W AI5_ALPHAQ9ZZX1 630 aa5.47□□□□□ -1.53
VMA16YHR026W SOD2P00447 233 aa5.46□□□□□ -1.54
VMA16YHR026W TEF1P02994 458 aaKnown RBP5.46□□□□□ -1.54
VMA16YHR026W YMR085WP0CF18 432 aa5.46□□□□□ -1.54
VMA16YHR026W PRP6P19735 899 aaPredicted RBP5.46□□□□□ -1.54
VMA16YHR026W RFA1P22336 621 aaKnown RBP5.46□□□□□ -1.54
VMA16YHR026W HEM12P32347 362 aaPredicted RBP5.46□□□□□ -1.54
VMA16YHR026W OTU2P38747 307 aaKnown RBP5.46□□□□□ -1.54
VMA16YHR026W GLG2P47011 380 aa5.46□□□□□ -1.54
VMA16YHR026W YJL132WP47014 750 aa5.46□□□□□ -1.54
VMA16YHR026W NBP35P52920 328 aa5.46□□□□□ -1.54
VMA16YHR026W KTR6P54070 446 aa5.46□□□□□ -1.54
VMA16YHR026W TAF11Q04226 346 aa5.46□□□□□ -1.54
VMA16YHR026W BUD22Q04347 519 aaKnown RBP5.46□□□□□ -1.54
VMA16YHR026W GRX8Q05926 109 aa5.46□□□□□ -1.54
VMA16YHR026W RXT3Q07458 294 aa5.46□□□□□ -1.54
VMA16YHR026W FRE7Q12333 620 aa5.46□□□□□ -1.54
VMA16YHR026W RRP36Q12481 300 aaPredicted RBP5.46□□□□□ -1.54
VMA16YHR026W SST2P11972 698 aaKnown RBP5.45□□□□□ -1.54
VMA16YHR026W AMD2P22580 549 aa5.45□□□□□ -1.54
VMA16YHR026W HRR25P29295 494 aaKnown RBP5.45□□□□□ -1.54
VMA16YHR026W HXT3P32466 567 aaKnown RBP5.45□□□□□ -1.54
VMA16YHR026W RPD3P32561 433 aa5.45□□□□□ -1.54
VMA16YHR026W BEM3P32873 1128 aa5.45□□□□□ -1.54
VMA16YHR026W THI80P35202 319 aa5.45□□□□□ -1.54
VMA16YHR026W FUI1P38196 639 aa5.45□□□□□ -1.54
VMA16YHR026W BIT2P38346 545 aa5.45□□□□□ -1.54
VMA16YHR026W EDC3P39998 551 aaKnown RBP5.45□□□□□ -1.54
VMA16YHR026W YAT2P40017 923 aa5.45□□□□□ -1.54
VMA16YHR026W PEP8P40335 379 aa5.45□□□□□ -1.54
VMA16YHR026W SEC28P40509 296 aaKnown RBP5.45□□□□□ -1.54
VMA16YHR026W IRC24P40580 263 aa5.45□□□□□ -1.54
VMA16YHR026W AXL1P40851 1208 aa5.45□□□□□ -1.54
VMA16YHR026W RRT5P43607 289 aa5.45□□□□□ -1.54
VMA16YHR026W FAR3P46671 204 aa5.45□□□□□ -1.54
VMA16YHR026W MNT2P53059 558 aa5.45□□□□□ -1.54
VMA16YHR026W RAI1P53063 387 aaKnown RBP5.45□□□□□ -1.54
VMA16YHR026W YTP1P53584 459 aa5.45□□□□□ -1.54
VMA16YHR026W UBX4P54730 416 aa5.45□□□□□ -1.54
VMA16YHR026W BET4Q00618 327 aa5.45□□□□□ -1.54
VMA16YHR026W LGE1Q02796 332 aaKnown RBP5.45□□□□□ -1.54
VMA16YHR026W YMR178WQ03219 274 aaKnown RBP5.45□□□□□ -1.54
VMA16YHR026W OSW1Q08692 278 aa5.45□□□□□ -1.54
VMA16YHR026W MPH2P0CD99 609 aa5.44□□□□□ -1.54
VMA16YHR026W GCY1P14065 312 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
VMA16YHR026W SNT1P25357 1226 aa5.44□□□□□ -1.54
VMA16YHR026W GID7P25569 745 aa5.44□□□□□ -1.54
VMA16YHR026W SMI1P32566 505 aa5.44□□□□□ -1.54
VMA16YHR026W TFC3P34111 1160 aa5.44□□□□□ -1.54
VMA16YHR026W SWH1P35845 1188 aa5.44□□□□□ -1.54
VMA16YHR026W RRP14P36080 434 aaKnown RBP5.44□□□□□ -1.54
VMA16YHR026W RIM2P38127 377 aa5.44□□□□□ -1.54
VMA16YHR026W SRP68P38687 599 aaKnown RBP5.44□□□□□ -1.54
VMA16YHR026W FSH1P38777 243 aaKnown RBP5.44□□□□□ -1.54
VMA16YHR026W YJL206CP39529 758 aa5.44□□□□□ -1.54
VMA16YHR026W FRT2P39734 528 aa5.44□□□□□ -1.54
VMA16YHR026W ALG5P40350 334 aa5.44□□□□□ -1.54
VMA16YHR026W MIG2P53035 382 aa5.44□□□□□ -1.54
VMA16YHR026W MRM2P53123 320 aa5.44□□□□□ -1.54
VMA16YHR026W YGR127WP53275 312 aa5.44□□□□□ -1.54
VMA16YHR026W IST1P53843 298 aaPredicted RBP5.44□□□□□ -1.54
VMA16YHR026W MET14Q02196 202 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms