RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	TUL1	P36096	758 aa		3.6	□□□□□ -1.83
SPO11	YHL022C	DUO1	P53168	247 aa	Known RBP	3.6	□□□□□ -1.83
SPO11	YHL022C	IPI3	P53877	555 aa		3.6	□□□□□ -1.83
SPO11	YHL022C	COQ9	Q05779	260 aa		3.6	□□□□□ -1.83
SPO11	YHL022C	MRPL51	Q06090	140 aa	Predicted RBP	3.6	□□□□□ -1.83
SPO11	YHL022C	FMP40	Q08968	688 aa	Predicted RBP	3.6	□□□□□ -1.83
SPO11	YHL022C	YBR126W-A	Q8TGU7	68 aa		3.6	□□□□□ -1.83
SPO11	YHL022C	YCL021W-A	Q96VH3	125 aa		3.6	□□□□□ -1.83
SPO11	YHL022C	HSH49	Q99181	213 aa	Predicted RBP	3.6	□□□□□ -1.83
SPO11	YHL022C	ART10	P18634	518 aa	Known RBP	3.59	□□□□□ -1.83
SPO11	YHL022C	SUI2	P20459	304 aa	Known RBP	3.59	□□□□□ -1.83
SPO11	YHL022C	YCR007C	P25354	239 aa		3.59	□□□□□ -1.83
SPO11	YHL022C	MCM10	P32354	571 aa		3.59	□□□□□ -1.83
SPO11	YHL022C	CCT6	P39079	546 aa		3.59	□□□□□ -1.83
SPO11	YHL022C	IVY1	Q04934	453 aa		3.59	□□□□□ -1.83
SPO11	YHL022C	PHO92	Q06390	306 aa		3.59	□□□□□ -1.83
SPO11	YHL022C	ATR1	P13090	542 aa		3.58	□□□□□ -1.84
SPO11	YHL022C	EST1	P17214	699 aa	Predicted RBP	3.58	□□□□□ -1.84
SPO11	YHL022C	ELO2	P25358	347 aa		3.58	□□□□□ -1.84
SPO11	YHL022C	YBP1	P38315	674 aa		3.58	□□□□□ -1.84
SPO11	YHL022C	HAT2	P39984	401 aa		3.58	□□□□□ -1.84
SPO11	YHL022C	ALG8	P40351	577 aa		3.58	□□□□□ -1.84
SPO11	YHL022C	OPY2	Q06810	360 aa		3.58	□□□□□ -1.84
SPO11	YHL022C	SWH1	P35845	1188 aa		3.57	□□□□□ -1.84
SPO11	YHL022C	IRC15	Q02733	499 aa		3.57	□□□□□ -1.84
SPO11	YHL022C	HUA2	Q12134	243 aa		3.57	□□□□□ -1.84
SPO11	YHL022C	CTF3	Q12748	733 aa		3.57	□□□□□ -1.84
SPO11	YHL022C	RNA14	P25298	677 aa	Known RBP	3.56	□□□□□ -1.84
SPO11	YHL022C	PUT3	P25502	979 aa	Predicted RBP	3.56	□□□□□ -1.84
SPO11	YHL022C	SSH4	P32343	579 aa		3.56	□□□□□ -1.84
SPO11	YHL022C	UTR4	P32626	227 aa		3.56	□□□□□ -1.84
SPO11	YHL022C	SHP1	P34223	423 aa		3.56	□□□□□ -1.84
SPO11	YHL022C	TIF4631	P39935	952 aa	Known RBP	3.56	□□□□□ -1.84
SPO11	YHL022C	THP1	Q08231	455 aa		3.56	□□□□□ -1.84
SPO11	YHL022C	HNT3	Q08702	217 aa		3.56	□□□□□ -1.84
SPO11	YHL022C	LSP1	Q12230	341 aa	Known RBP	3.56	□□□□□ -1.84
SPO11	YHL022C	NOP58	Q12499	511 aa	Known RBP	3.56	□□□□□ -1.84
SPO11	YHL022C	PMR1	P13586	950 aa		3.55	□□□□□ -1.84
SPO11	YHL022C	MSN2	P33748	704 aa		3.55	□□□□□ -1.84
SPO11	YHL022C	DUG2	P38149	878 aa		3.55	□□□□□ -1.84
SPO11	YHL022C	TCM62	P38228	572 aa	Known RBP	3.55	□□□□□ -1.84
SPO11	YHL022C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
SPO11	YHL022C	AIM22	P47051	409 aa		3.55	□□□□□ -1.84
SPO11	YHL022C	MSO1	P53604	210 aa	Known RBP	3.55	□□□□□ -1.84
SPO11	YHL022C	TOF2	Q02208	771 aa		3.55	□□□□□ -1.84
SPO11	YHL022C	YER078W-A	Q3E7A2	54 aa		3.55	□□□□□ -1.84
SPO11	YHL022C	YPT6	Q99260	215 aa		3.55	□□□□□ -1.84
SPO11	YHL022C	FUN19	P28003	413 aa	Predicted RBP	3.54	□□□□□ -1.84
SPO11	YHL022C	SEF1	P34228	1148 aa		3.54	□□□□□ -1.84
SPO11	YHL022C	BNA4	P38169	460 aa		3.54	□□□□□ -1.84
SPO11	YHL022C	ALG5	P40350	334 aa		3.54	□□□□□ -1.84
SPO11	YHL022C	ALK1	P43633	760 aa	Known RBP	3.54	□□□□□ -1.84
SPO11	YHL022C	GWT1	P47026	490 aa		3.54	□□□□□ -1.84
SPO11	YHL022C	IMD4	P50094	524 aa	Known RBP	3.54	□□□□□ -1.84
SPO11	YHL022C	VPS74	Q06385	345 aa		3.54	□□□□□ -1.84
SPO11	YHL022C	YEH1	Q07804	573 aa		3.54	□□□□□ -1.84
SPO11	YHL022C	CFT2	Q12102	859 aa	Predicted RBP	3.54	□□□□□ -1.84
SPO11	YHL022C	MSR1	P38714	643 aa		3.53	□□□□□ -1.84
SPO11	YHL022C	FLC2	P39719	783 aa		3.53	□□□□□ -1.84
SPO11	YHL022C	MKT1	P40850	830 aa	Known RBP	3.53	□□□□□ -1.84
SPO11	YHL022C	YGL242C	P53066	181 aa		3.53	□□□□□ -1.84
SPO11	YHL022C	GPI1	P53306	609 aa		3.53	□□□□□ -1.84
SPO11	YHL022C	NMD4	Q12129	218 aa		3.53	□□□□□ -1.84
SPO11	YHL022C	RLM1	Q12224	676 aa		3.53	□□□□□ -1.84
SPO11	YHL022C	RKM5	Q12367	367 aa		3.53	□□□□□ -1.84
SPO11	YHL022C	MRPL4	P36517	319 aa		3.52	□□□□□ -1.85
SPO11	YHL022C	RFS1	P38234	210 aa	Known RBP	3.52	□□□□□ -1.85
SPO11	YHL022C	SHE10	P53075	577 aa		3.52	□□□□□ -1.85
SPO11	YHL022C	VID30	P53076	958 aa		3.52	□□□□□ -1.85
SPO11	YHL022C	ZPR1	P53303	486 aa	Known RBP	3.52	□□□□□ -1.85
SPO11	YHL022C	HEF3	P53978	1044 aa	Known RBP	3.52	□□□□□ -1.85
SPO11	YHL022C	RBS1	Q05672	457 aa	Known RBP	3.52	□□□□□ -1.85
SPO11	YHL022C	MES1	P00958	751 aa	Known RBP	3.51	□□□□□ -1.85
SPO11	YHL022C	CPR1	P14832	162 aa	Known RBP	3.51	□□□□□ -1.85
SPO11	YHL022C	EXO70	P19658	623 aa		3.51	□□□□□ -1.85
SPO11	YHL022C	LDB16	P25587	256 aa		3.51	□□□□□ -1.85
SPO11	YHL022C	PAH1	P32567	862 aa		3.51	□□□□□ -1.85
SPO11	YHL022C	TCD2	P36101	447 aa	Known RBP	3.51	□□□□□ -1.85
SPO11	YHL022C	DED81	P38707	554 aa	Known RBP	3.51	□□□□□ -1.85
SPO11	YHL022C	ADD37	Q03233	198 aa		3.51	□□□□□ -1.85
SPO11	YHL022C	GLK1	P17709	500 aa	Known RBP	3.5	□□□□□ -1.85
SPO11	YHL022C	DPB3	P27344	201 aa		3.5	□□□□□ -1.85
SPO11	YHL022C	KEL1	P38853	1164 aa	Known RBP	3.5	□□□□□ -1.85
SPO11	YHL022C	ELP2	P42935	788 aa		3.5	□□□□□ -1.85
SPO11	YHL022C	RBG2	P53295	368 aa	Known RBP	3.5	□□□□□ -1.85
SPO11	YHL022C	ARK1	P53974	638 aa		3.5	□□□□□ -1.85
SPO11	YHL022C	PIR3	Q03180	325 aa		3.5	□□□□□ -1.85
SPO11	YHL022C	YOR387C	Q08910	206 aa		3.5	□□□□□ -1.85
SPO11	YHL022C	KEL3	Q08979	651 aa	Predicted RBP	3.5	□□□□□ -1.85
SPO11	YHL022C	YDR056C	Q12025	205 aa		3.5	□□□□□ -1.85
SPO11	YHL022C	COR1	P07256	457 aa		3.49	□□□□□ -1.85
SPO11	YHL022C	SEC53	P07283	254 aa	Known RBP	3.49	□□□□□ -1.85
SPO11	YHL022C	LPD1	P09624	499 aa	Known RBP	3.49	□□□□□ -1.85
SPO11	YHL022C	AAC3	P18238	307 aa		3.49	□□□□□ -1.85
SPO11	YHL022C	PRP2	P20095	876 aa	Predicted RBP	3.49	□□□□□ -1.85
SPO11	YHL022C	FAU1	P40099	211 aa		3.49	□□□□□ -1.85
SPO11	YHL022C	MRX6	P48564	524 aa		3.49	□□□□□ -1.85
SPO11	YHL022C	GAL80	P04387	435 aa		3.48	□□□□□ -1.85
SPO11	YHL022C	CHS1	P08004	1131 aa		3.48	□□□□□ -1.85
SPO11	YHL022C	YME1	P32795	747 aa		3.48	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms