RNA–Protein interactions for RNA: YGR167W

CLC1, Transcript of Clathrin light chain, yeast

Gene CLC1, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLC1	YGR167W	NAT1	P12945	854 aa	Known RBP	4.3	□□□□□ -1.72
CLC1	YGR167W	ART10	P18634	518 aa	Known RBP	4.3	□□□□□ -1.72
CLC1	YGR167W	PPZ1	P26570	692 aa		4.3	□□□□□ -1.72
CLC1	YGR167W	YUR1	P26725	428 aa		4.3	□□□□□ -1.72
CLC1	YGR167W	ERG1	P32476	496 aa	Known RBP	4.3	□□□□□ -1.72
CLC1	YGR167W	MIC60	P36112	540 aa		4.3	□□□□□ -1.72
CLC1	YGR167W	YAT2	P40017	923 aa		4.3	□□□□□ -1.72
CLC1	YGR167W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.3	□□□□□ -1.72	not detected
CLC1	YGR167W	SNG1	P46950	547 aa		4.3	□□□□□ -1.72
CLC1	YGR167W	VID30	P53076	958 aa		4.3	□□□□□ -1.72
CLC1	YGR167W	BTN2	P53286	410 aa		4.3	□□□□□ -1.72
CLC1	YGR167W	TDA7	P53882	636 aa	Predicted RBP	4.3	□□□□□ -1.72
CLC1	YGR167W	VPS9	P54787	451 aa		4.3	□□□□□ -1.72
CLC1	YGR167W	MSS11	Q03825	758 aa		4.3	□□□□□ -1.72
CLC1	YGR167W	PDH1	Q12428	516 aa	Known RBP	4.3	□□□□□ -1.72
CLC1	YGR167W	ARP6	Q12509	438 aa		4.3	□□□□□ -1.72
CLC1	YGR167W	PMS1	P14242	873 aa		4.29	□□□□□ -1.72
CLC1	YGR167W	SGV1	P23293	657 aa	Known RBP	4.29	□□□□□ -1.72
CLC1	YGR167W	ACH1	P32316	526 aa		4.29	□□□□□ -1.72
CLC1	YGR167W	SEF1	P34228	1148 aa		4.29	□□□□□ -1.72
CLC1	YGR167W	RIM2	P38127	377 aa		4.29	□□□□□ -1.72
CLC1	YGR167W	REG2	P38232	338 aa		4.29	□□□□□ -1.72
CLC1	YGR167W	CIN4	P39110	191 aa		4.29	□□□□□ -1.72
CLC1	YGR167W	STB2	P46679	850 aa		4.29	□□□□□ -1.72
CLC1	YGR167W	YGR126W	P53274	230 aa		4.29	□□□□□ -1.72
CLC1	YGR167W	BUD32	P53323	261 aa		4.29	□□□□□ -1.72
CLC1	YGR167W	YDR131C	Q03899	556 aa		4.29	□□□□□ -1.72
CLC1	YGR167W	YDL057W	Q07379	328 aa		4.29	□□□□□ -1.72
CLC1	YGR167W	CDC45	Q08032	650 aa		4.29	□□□□□ -1.72
CLC1	YGR167W	NCE102	Q12207	173 aa	RIP-Chip data	4.29	□□□□□ -1.72	not detected
CLC1	YGR167W	YJR112W-A	Q3E743	109 aa		4.29	□□□□□ -1.72
CLC1	YGR167W	KRR1	P25586	316 aa	Predicted RBP	4.28	□□□□□ -1.72
CLC1	YGR167W	DPH2	P32461	534 aa		4.28	□□□□□ -1.72
CLC1	YGR167W	SAS3	P34218	831 aa		4.28	□□□□□ -1.72
CLC1	YGR167W	ALG5	P40350	334 aa		4.28	□□□□□ -1.72
CLC1	YGR167W	IMD4	P50094	524 aa	Known RBP	4.28	□□□□□ -1.72
CLC1	YGR167W	CUL3	P53202	744 aa		4.28	□□□□□ -1.72
CLC1	YGR167W	RHO4	Q00246	291 aa		4.28	□□□□□ -1.72
CLC1	YGR167W	CIK1	Q01649	594 aa		4.28	□□□□□ -1.72
CLC1	YGR167W	SHR3	Q02774	210 aa		4.28	□□□□□ -1.72
CLC1	YGR167W	RIM20	Q12033	661 aa		4.28	□□□□□ -1.72
CLC1	YGR167W	PEP5	P12868	1029 aa		4.27	□□□□□ -1.73
CLC1	YGR167W	TYR1	P20049	452 aa		4.27	□□□□□ -1.73
CLC1	YGR167W	MNE1	P24720	663 aa		4.27	□□□□□ -1.73
CLC1	YGR167W	ADK2	P26364	225 aa		4.27	□□□□□ -1.73
CLC1	YGR167W	TCD2	P36101	447 aa	Known RBP	4.27	□□□□□ -1.73
CLC1	YGR167W	YKL023W	P36103	277 aa	Known RBP	4.27	□□□□□ -1.73
CLC1	YGR167W	SRO77	P38163	1010 aa		4.27	□□□□□ -1.73
CLC1	YGR167W	RXT2	P38255	430 aa		4.27	□□□□□ -1.73
CLC1	YGR167W	OGG1	P53397	376 aa	Predicted RBP	4.27	□□□□□ -1.73
CLC1	YGR167W	SAM50	P53969	484 aa		4.27	□□□□□ -1.73
CLC1	YGR167W	RBA50	Q04418	439 aa		4.27	□□□□□ -1.73
CLC1	YGR167W	COQ9	Q05779	260 aa		4.27	□□□□□ -1.73
CLC1	YGR167W	VPS38	Q05919	439 aa		4.27	□□□□□ -1.73
CLC1	YGR167W	RLM1	Q12224	676 aa		4.27	□□□□□ -1.73
CLC1	YGR167W	CYB2	P00175	591 aa		4.26	□□□□□ -1.73
CLC1	YGR167W	GAL80	P04387	435 aa		4.26	□□□□□ -1.73
CLC1	YGR167W	PDA1	P16387	420 aa	Known RBP	4.26	□□□□□ -1.73
CLC1	YGR167W	MDL1	P33310	695 aa		4.26	□□□□□ -1.73
CLC1	YGR167W	RRP3	P38712	501 aa	Known RBP	4.26	□□□□□ -1.73
CLC1	YGR167W	RTT107	P38850	1070 aa		4.26	□□□□□ -1.73
CLC1	YGR167W	SMF1	P38925	575 aa		4.26	□□□□□ -1.73
CLC1	YGR167W	GDI1	P39958	451 aa	Known RBP	4.26	□□□□□ -1.73
CLC1	YGR167W	MET18	P40469	1032 aa		4.26	□□□□□ -1.73
CLC1	YGR167W	SSU1	P41930	458 aa		4.26	□□□□□ -1.73
CLC1	YGR167W	ROK1	P45818	564 aa	Predicted RBP	4.26	□□□□□ -1.73
CLC1	YGR167W	MPP10	P47083	593 aa	Known RBP	4.26	□□□□□ -1.73
CLC1	YGR167W	YGR066C	P53242	292 aa		4.26	□□□□□ -1.73
CLC1	YGR167W	ART5	P53244	586 aa	Known RBP	4.26	□□□□□ -1.73
CLC1	YGR167W	DRN1	P53255	507 aa	Known RBP	4.26	□□□□□ -1.73
CLC1	YGR167W	YMR317W	Q04893	1140 aa		4.26	□□□□□ -1.73
CLC1	YGR167W	YDR286C	Q05530	114 aa		4.26	□□□□□ -1.73
CLC1	YGR167W	YLR345W	Q06137	509 aa		4.26	□□□□□ -1.73
CLC1	YGR167W	THI20	Q08224	551 aa		4.26	□□□□□ -1.73
CLC1	YGR167W	GRX6	Q12438	231 aa		4.26	□□□□□ -1.73
CLC1	YGR167W	DAL5	P15365	543 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	TPM1	P17536	199 aa	Known RBP	4.25	□□□□□ -1.73
CLC1	YGR167W	SUI2	P20459	304 aa	Known RBP	4.25	□□□□□ -1.73
CLC1	YGR167W	SEC62	P21825	274 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	CLB3	P24870	427 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	ELO2	P25358	347 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	GPI10	P30777	616 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	VPS17	P32913	551 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	YEL057C	P39983	233 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	YJL070C	P40361	888 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	MET28	P40573	187 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	YGL260W	P53056	76 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	YMR087W	Q04299	284 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	AIM32	Q04689	311 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	GLO2	Q05584	274 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	YEH2	Q07950	538 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	DAP1	Q12091	152 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	PAR32	Q12515	295 aa	Known RBP	4.25	□□□□□ -1.73
CLC1	YGR167W	YOL159C-A	Q3E769	90 aa		4.25	□□□□□ -1.73
CLC1	YGR167W	PEP4	P07267	405 aa	Known RBP	4.24	□□□□□ -1.73
CLC1	YGR167W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
CLC1	YGR167W	ECM15	P35195	104 aa		4.24	□□□□□ -1.73
CLC1	YGR167W	STB6	P36085	766 aa		4.24	□□□□□ -1.73
CLC1	YGR167W	APE3	P37302	537 aa	Known RBP	4.24	□□□□□ -1.73
CLC1	YGR167W	VID24	P38263	362 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms