RNA–Protein interactions for RNA: YGL078C

DBP3, Transcript of RNA-Dependent ATPase, member of DExD/H-box family, yeast

Gene DBP3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP3	YGL078C	LSM1	P47017	172 aa	Known RBP	4	□□□□□ -1.77
DBP3	YGL078C	YJR008W	P47085	338 aa		4	□□□□□ -1.77
DBP3	YGL078C	LSM8	P47093	109 aa	Known RBP	4	□□□□□ -1.77
DBP3	YGL078C	YGR111W	P53265	400 aa		4	□□□□□ -1.77
DBP3	YGL078C	SNF12	P53628	566 aa		4	□□□□□ -1.77
DBP3	YGL078C	UBX4	P54730	416 aa		4	□□□□□ -1.77
DBP3	YGL078C	DID2	P69771	204 aa		4	□□□□□ -1.77
DBP3	YGL078C	EGD1	Q02642	157 aa	Known RBP	4	□□□□□ -1.77
DBP3	YGL078C	MUK1	Q02866	612 aa		4	□□□□□ -1.77
DBP3	YGL078C	FDC1	Q03034	503 aa		4	□□□□□ -1.77
DBP3	YGL078C	COQ9	Q05779	260 aa		4	□□□□□ -1.77
DBP3	YGL078C	SGT1	Q08446	395 aa		4	□□□□□ -1.77
DBP3	YGL078C	MCH5	Q08777	521 aa		4	□□□□□ -1.77
DBP3	YGL078C	FEX1	Q08913	375 aa		4	□□□□□ -1.77
DBP3	YGL078C	YDR061W	Q12298	539 aa		4	□□□□□ -1.77
DBP3	YGL078C	HRT3	Q12347	344 aa		4	□□□□□ -1.77
DBP3	YGL078C	AVL9	Q12500	764 aa		4	□□□□□ -1.77
DBP3	YGL078C	COR1	P07256	457 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	ERG20	P08524	352 aa	Known RBP	3.99	□□□□□ -1.77
DBP3	YGL078C	TUB1	P09733	447 aa	Known RBP	3.99	□□□□□ -1.77
DBP3	YGL078C	MRP2	P10663	115 aa	Predicted RBP	3.99	□□□□□ -1.77
DBP3	YGL078C	MER1	P16523	270 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	ERG6	P25087	383 aa	Known RBP	3.99	□□□□□ -1.77
DBP3	YGL078C	RVS161	P25343	265 aa	Known RBP	3.99	□□□□□ -1.77
DBP3	YGL078C	SNT1	P25357	1226 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	GFD2	P25370	566 aa	Known RBP	3.99	□□□□□ -1.77
DBP3	YGL078C	IMG2	P25642	146 aa	Predicted RBP	3.99	□□□□□ -1.77
DBP3	YGL078C	TAF14	P35189	244 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	YKL050C	P35736	922 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	CCL1	P37366	393 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	ARA1	P38115	344 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	VHC1	P38329	1120 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	YHI9	P38765	294 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	FMO1	P38866	432 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	SEC31	P38968	1273 aa	Known RBP	3.99	□□□□□ -1.77
DBP3	YGL078C	LYS9	P38999	446 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	LCP5	P40079	357 aa	Predicted RBP	3.99	□□□□□ -1.77
DBP3	YGL078C	YNL195C	P40168	261 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	PEF1	P53238	335 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	ECM9	Q02202	377 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	YHM2	Q04013	314 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	SPC2	Q04969	178 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	SMD2	Q06217	110 aa	Known RBP	3.99	□□□□□ -1.77
DBP3	YGL078C	BRX1	Q08235	291 aa	Known RBP	3.99	□□□□□ -1.77
DBP3	YGL078C	YPR202W	Q08993	238 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	ATG34	Q12292	412 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	ECM3	Q99252	613 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	YRF1-1	P0CX20	1796 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	YRF1-5	P0CX21	1796 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	YRF1-8	P0CX22	1796 aa		3.99	□□□□□ -1.77
DBP3	YGL078C	ISY1	P21374	235 aa	Predicted RBP	3.98	□□□□□ -1.77
DBP3	YGL078C	HXT2	P23585	541 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	AAD3	P25612	363 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	PMT2	P31382	759 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	PET127	P32606	800 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	CYM1	P32898	989 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	PXA2	P34230	853 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	YBR139W	P38109	508 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	SEO1	P39709	593 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	YAP1802	P53309	568 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	KTR5	P53966	522 aa	Predicted RBP	3.98	□□□□□ -1.77
DBP3	YGL078C	BNA7	Q04066	261 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	YMR027W	Q04371	470 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	GAL83	Q04739	417 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	HBT1	Q07653	1046 aa	Known RBP	3.98	□□□□□ -1.77
DBP3	YGL078C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
DBP3	YGL078C	PEX15	Q08215	383 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	YOL075C	Q08234	1294 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	YPL191C	Q08930	360 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	FEX2	Q08991	375 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	TAH18	Q12181	623 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	YOR214C	Q12282	236 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	YKL033W-A	Q86ZR7	236 aa		3.98	□□□□□ -1.77
DBP3	YGL078C	NUC1	P08466	329 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	PMS1	P14242	873 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	PMA2	P19657	947 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	SGV1	P23293	657 aa	Known RBP	3.97	□□□□□ -1.77
DBP3	YGL078C	RRT12	P25381	491 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	CPR3	P25719	182 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	RAD14	P28519	371 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	NUP2	P32499	720 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	OAR1	P35731	278 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	PDX3	P38075	228 aa	Known RBP	3.97	□□□□□ -1.77
DBP3	YGL078C	ECM31	P38122	312 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	MOH1	P38191	138 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	RXT2	P38255	430 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
DBP3	YGL078C	OTU2	P38747	307 aa	Known RBP	3.97	□□□□□ -1.77
DBP3	YGL078C	SFB3	P38810	929 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	RRP8	P38961	392 aa	Known RBP	3.97	□□□□□ -1.77
DBP3	YGL078C	FAA2	P39518	744 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	SEN34	P39707	275 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	GET2	P40056	285 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	EMP65	P40085	556 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	MNT3	P40549	630 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	COS4	P43542	379 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	FET5	P43561	622 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	COS5	P47187	383 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	DIE2	P50076	525 aa		3.97	□□□□□ -1.77
DBP3	YGL078C	MNP1	P53163	194 aa	Predicted RBP	3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms