RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSN2	YDR443C	PDA1	P16387	420 aa	Known RBP	2.61	□□□□□ -1.99
SSN2	YDR443C	UGA1	P17649	471 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	SAG1	P20840	650 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	ICL1	P28240	557 aa	Predicted RBP	2.61	□□□□□ -1.99
SSN2	YDR443C	FAA1	P30624	700 aa	Known RBP	2.61	□□□□□ -1.99
SSN2	YDR443C	KES1	P35844	434 aa	Known RBP	2.61	□□□□□ -1.99
SSN2	YDR443C	AGP2	P38090	596 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	MAL32	P38158	584 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	SAF1	P38352	637 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	LOC1	P43586	204 aa	Predicted RBP	2.61	□□□□□ -1.99
SSN2	YDR443C	NMD5	P46970	1048 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	TWF1	P53250	332 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	MAL12	P53341	584 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	BRX1	Q08235	291 aa	Known RBP	2.61	□□□□□ -1.99
SSN2	YDR443C	NRT1	Q08485	598 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	VIK1	Q12045	647 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	GAL4	P04386	881 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	TUP1	P16649	713 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	PMA2	P19657	947 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	MGR1	P25573	417 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	YCR016W	P25617	290 aa	Known RBP	2.61	□□□□□ -1.99
SSN2	YDR443C	YIH1	P25637	258 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	EMP70	P32802	667 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	YKL071W	P36086	256 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	YKL023W	P36103	277 aa	Known RBP	2.61	□□□□□ -1.99
SSN2	YDR443C	YBR139W	P38109	508 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	SWC5	P38326	303 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	TED1	P40533	473 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	RPA34	P47006	233 aa	Predicted RBP	2.61	□□□□□ -1.99
SSN2	YDR443C	SMC3	P47037	1230 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	EFM3	P47163	339 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	YGR149W	P48236	432 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	RAI1	P53063	387 aa	Known RBP	2.61	□□□□□ -1.99
SSN2	YDR443C	MPS2	P53159	387 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	DSL1	P53847	754 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	RQC1	Q05468	723 aa	Known RBP	2.61	□□□□□ -1.99
SSN2	YDR443C	ATG26	Q06321	1198 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	NCR1	Q12200	1170 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	MED4	Q12343	284 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	YRF1-3	P0CX14	1859 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	YRF1-7	P0CX15	1859 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	YRF1-6	P53819	1859 aa		2.61	□□□□□ -1.99
SSN2	YDR443C	YBR085C-A	O43137	85 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	SAM1	P10659	382 aa	Known RBP	2.6	□□□□□ -1.99
SSN2	YDR443C	SNF5	P18480	905 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	PEX1	P24004	1043 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	BUD14	P27637	709 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	RRP1	P35178	278 aa	Predicted RBP	2.6	□□□□□ -1.99
SSN2	YDR443C	YER085C	P40058	173 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	BUR6	P40096	142 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	RTT102	P53330	157 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	ACL4	Q03771	387 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	TPP1	Q03796	238 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	RRP17	Q04031	235 aa	Predicted RBP	2.6	□□□□□ -1.99
SSN2	YDR443C	MUS81	Q04149	632 aa	Predicted RBP	2.6	□□□□□ -1.99
SSN2	YDR443C	CRT10	Q08226	957 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	GLE1	Q12315	538 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	ECM3	Q99252	613 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	ADE6	P38972	1358 aa	Known RBP	2.6	□□□□□ -1.99
SSN2	YDR443C	ILV2	P07342	687 aa	Known RBP	2.6	□□□□□ -1.99
SSN2	YDR443C	TUB3	P09734	445 aa	Known RBP	2.6	□□□□□ -1.99
SSN2	YDR443C	HEM1	P09950	548 aa	Predicted RBP	2.6	□□□□□ -1.99
SSN2	YDR443C	MRP13	P12686	339 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	RDS1	P25611	832 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	PRE4	P30657	266 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	MCM4	P30665	933 aa	Known RBP	2.6	□□□□□ -1.99
SSN2	YDR443C	MCX1	P38323	520 aa	Predicted RBP	2.6	□□□□□ -1.99
SSN2	YDR443C	SMF2	P38778	549 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	SKN7	P38889	622 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	NUP60	P39705	539 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	GCV1	P48015	400 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	TNA1	P53322	534 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	AEP3	Q12089	606 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	NBL1	Q3E7Y6	73 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	PSK1	P31374	1356 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	YPK2	P18961	677 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	YSR3	P23501	404 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	PET127	P32606	800 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	RAD23	P32628	398 aa	Known RBP	2.6	□□□□□ -1.99
SSN2	YDR443C	IMP3	P32899	183 aa	Predicted RBP	2.6	□□□□□ -1.99
SSN2	YDR443C	MND2	P40577	368 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	AIM22	P47051	409 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	APT1	P49435	187 aa	Known RBP	2.6	□□□□□ -1.99
SSN2	YDR443C	FUS2	Q05670	677 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	STE23	Q06010	1027 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	AIM6	Q07716	390 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	LOT6	Q07923	191 aa		2.6	□□□□□ -1.99
SSN2	YDR443C	RKM1	Q08961	583 aa	Predicted RBP	2.6	□□□□□ -1.99
SSN2	YDR443C	SSA3	P09435	649 aa	Known RBP	2.59	□□□□□ -1.99
SSN2	YDR443C	GAL3	P13045	520 aa		2.59	□□□□□ -1.99
SSN2	YDR443C	SPO7	P18410	259 aa		2.59	□□□□□ -1.99
SSN2	YDR443C	YCL068C	P25593	260 aa		2.59	□□□□□ -1.99
SSN2	YDR443C	YSC84	P32793	468 aa		2.59	□□□□□ -1.99
SSN2	YDR443C	ATP3	P38077	311 aa	Known RBP	2.59	□□□□□ -1.99
SSN2	YDR443C	MLH1	P38920	769 aa		2.59	□□□□□ -1.99
SSN2	YDR443C	PRK1	P40494	810 aa		2.59	□□□□□ -1.99
SSN2	YDR443C	BIO3	P50277	480 aa		2.59	□□□□□ -1.99
SSN2	YDR443C	CAF130	P53280	1122 aa	Predicted RBP	2.59	□□□□□ -1.99
SSN2	YDR443C	OCA2	P53949	197 aa		2.59	□□□□□ -1.99
SSN2	YDR443C	KTR6	P54070	446 aa		2.59	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms