RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM6, Length 261 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM6	YDR378C	DIC1	Q06143	298 aa		4.9	□□□□□ -1.63
LSM6	YDR378C	PDH1	Q12428	516 aa	Known RBP	4.9	□□□□□ -1.63
LSM6	YDR378C	YDL007C-A	Q2V2Q0	85 aa		4.9	□□□□□ -1.63
LSM6	YDR378C	BRR1	Q99177	341 aa	Predicted RBP	4.9	□□□□□ -1.63
LSM6	YDR378C	YML133C	Q03099	1374 aa		4.9	□□□□□ -1.63
LSM6	YDR378C	YLL067C	Q07888	1374 aa		4.9	□□□□□ -1.63
LSM6	YDR378C	YLL066C	Q99208	1374 aa		4.9	□□□□□ -1.63
LSM6	YDR378C	TYR1	P20049	452 aa		4.89	□□□□□ -1.63
LSM6	YDR378C	PRP2	P20095	876 aa	Predicted RBP	4.89	□□□□□ -1.63
LSM6	YDR378C	ELO2	P25358	347 aa		4.89	□□□□□ -1.63
LSM6	YDR378C	ERG3	P32353	365 aa		4.89	□□□□□ -1.63
LSM6	YDR378C	SPC34	P36131	295 aa		4.89	□□□□□ -1.63
LSM6	YDR378C	EFM2	P38347	419 aa		4.89	□□□□□ -1.63
LSM6	YDR378C	YIR014W	P40570	242 aa		4.89	□□□□□ -1.63
LSM6	YDR378C	SNM1	P40993	198 aa		4.89	□□□□□ -1.63
LSM6	YDR378C	HXT14	P42833	540 aa		4.89	□□□□□ -1.63
LSM6	YDR378C	VTC2	P43585	828 aa		4.89	□□□□□ -1.63
LSM6	YDR378C	SAD1	P43589	448 aa		4.89	□□□□□ -1.63
LSM6	YDR378C	CUL3	P53202	744 aa		4.89	□□□□□ -1.63
LSM6	YDR378C	BUD32	P53323	261 aa		4.89	□□□□□ -1.63
LSM6	YDR378C	LSC1	P53598	329 aa	Known RBP	4.89	□□□□□ -1.63
LSM6	YDR378C	TDA7	P53882	636 aa	Predicted RBP	4.89	□□□□□ -1.63
LSM6	YDR378C	SAM50	P53969	484 aa		4.89	□□□□□ -1.63
LSM6	YDR378C	RQC1	Q05468	723 aa	Known RBP	4.89	□□□□□ -1.63
LSM6	YDR378C	YOR365C	Q08844	703 aa		4.89	□□□□□ -1.63
LSM6	YDR378C	RPL31B	P0C2H9	113 aa	Known RBP	4.88	□□□□□ -1.63
LSM6	YDR378C	ACH1	P32316	526 aa		4.88	□□□□□ -1.63
LSM6	YDR378C	VPS17	P32913	551 aa		4.88	□□□□□ -1.63
LSM6	YDR378C	BNA4	P38169	460 aa		4.88	□□□□□ -1.63
LSM6	YDR378C	BZZ1	P38822	633 aa		4.88	□□□□□ -1.63
LSM6	YDR378C	AIM22	P47051	409 aa		4.88	□□□□□ -1.63
LSM6	YDR378C	YJR154W	P47181	346 aa		4.88	□□□□□ -1.63
LSM6	YDR378C	NUP53	Q03790	475 aa		4.88	□□□□□ -1.63
LSM6	YDR378C	FMP45	Q07651	309 aa		4.88	□□□□□ -1.63
LSM6	YDR378C	YEH2	Q07950	538 aa		4.88	□□□□□ -1.63
LSM6	YDR378C	COR1	P07256	457 aa		4.87	□□□□□ -1.63
LSM6	YDR378C	RPS2	P25443	254 aa	Known RBP	4.87	□□□□□ -1.63
LSM6	YDR378C	ERG1	P32476	496 aa	Known RBP	4.87	□□□□□ -1.63
LSM6	YDR378C	SEC66	P33754	206 aa		4.87	□□□□□ -1.63
LSM6	YDR378C	MPE1	P35728	441 aa	Known RBP	4.87	□□□□□ -1.63
LSM6	YDR378C	TCM62	P38228	572 aa	Known RBP	4.87	□□□□□ -1.63
LSM6	YDR378C	MBB1	P39534	108 aa		4.87	□□□□□ -1.63
LSM6	YDR378C	ZPR1	P53303	486 aa	Known RBP	4.87	□□□□□ -1.63
LSM6	YDR378C	HEF3	P53978	1044 aa	Known RBP	4.87	□□□□□ -1.63
LSM6	YDR378C	CSR2	Q12734	1121 aa		4.87	□□□□□ -1.63
LSM6	YDR378C	RAD52	P06778	471 aa	Known RBP	4.86	□□□□□ -1.63
LSM6	YDR378C	BAR1	P12630	587 aa		4.86	□□□□□ -1.63
LSM6	YDR378C	GLN3	P18494	730 aa		4.86	□□□□□ -1.63
LSM6	YDR378C	SEC62	P21825	274 aa		4.86	□□□□□ -1.63
LSM6	YDR378C	CLB3	P24870	427 aa		4.86	□□□□□ -1.63
LSM6	YDR378C	DUG2	P38149	878 aa		4.86	□□□□□ -1.63
LSM6	YDR378C	TIF4631	P39935	952 aa	Known RBP	4.86	□□□□□ -1.63
LSM6	YDR378C	YTA12	P40341	825 aa		4.86	□□□□□ -1.63
LSM6	YDR378C	CSM2	P40465	213 aa		4.86	□□□□□ -1.63
LSM6	YDR378C	YMR155W	Q03795	547 aa		4.86	□□□□□ -1.63
LSM6	YDR378C	THI20	Q08224	551 aa		4.86	□□□□□ -1.63
LSM6	YDR378C	RAV1	P47104	1357 aa		4.86	□□□□□ -1.63
LSM6	YDR378C	BYE1	P36106	594 aa		4.85	□□□□□ -1.63
LSM6	YDR378C	YER130C	P39959	443 aa		4.85	□□□□□ -1.63
LSM6	YDR378C	YJL068C	P40363	299 aa		4.85	□□□□□ -1.63
LSM6	YDR378C	GPD2	P41911	440 aa	Known RBP	4.85	□□□□□ -1.63
LSM6	YDR378C	PGA3	Q12746	312 aa	Known RBP	4.85	□□□□□ -1.63
LSM6	YDR378C	PMS1	P14242	873 aa		4.84	□□□□□ -1.63
LSM6	YDR378C	APE1	P14904	514 aa		4.84	□□□□□ -1.63
LSM6	YDR378C	SGV1	P23293	657 aa	Known RBP	4.84	□□□□□ -1.63
LSM6	YDR378C	NFU1	P32860	256 aa		4.84	□□□□□ -1.63
LSM6	YDR378C	MSN2	P33748	704 aa		4.84	□□□□□ -1.63
LSM6	YDR378C	ECM15	P35195	104 aa		4.84	□□□□□ -1.63
LSM6	YDR378C	YND1	P40009	630 aa		4.84	□□□□□ -1.63
LSM6	YDR378C	GUF1	P46943	645 aa		4.84	□□□□□ -1.63
LSM6	YDR378C	DRN1	P53255	507 aa	Known RBP	4.84	□□□□□ -1.63
LSM6	YDR378C	VTA1	Q06263	330 aa		4.84	□□□□□ -1.63
LSM6	YDR378C	GRS2	Q06817	618 aa		4.84	□□□□□ -1.63
LSM6	YDR378C	RAD14	P28519	371 aa		4.83	□□□□□ -1.64
LSM6	YDR378C	UTR4	P32626	227 aa		4.83	□□□□□ -1.64
LSM6	YDR378C	SAS3	P34218	831 aa		4.83	□□□□□ -1.64
LSM6	YDR378C	OSH3	P38713	996 aa	Known RBP	4.83	□□□□□ -1.64
LSM6	YDR378C	DIM1	P41819	318 aa	Known RBP	4.83	□□□□□ -1.64
LSM6	YDR378C	IVY1	Q04934	453 aa		4.83	□□□□□ -1.64
LSM6	YDR378C	YOL159C-A	Q3E769	90 aa		4.83	□□□□□ -1.64
LSM6	YDR378C	SUC2	P00724	532 aa		4.82	□□□□□ -1.64
LSM6	YDR378C	RPL3	P14126	387 aa	Known RBP	4.82	□□□□□ -1.64
LSM6	YDR378C	CLC1	P17891	233 aa		4.82	□□□□□ -1.64
LSM6	YDR378C	RIM2	P38127	377 aa		4.82	□□□□□ -1.64
LSM6	YDR378C	POP1	P41812	875 aa		4.82	□□□□□ -1.64
LSM6	YDR378C	MNP1	P53163	194 aa	Predicted RBP	4.82	□□□□□ -1.64
LSM6	YDR378C	SLD5	Q03406	294 aa		4.82	□□□□□ -1.64
LSM6	YDR378C	RBA50	Q04418	439 aa		4.82	□□□□□ -1.64
LSM6	YDR378C	NRT1	Q08485	598 aa		4.82	□□□□□ -1.64
LSM6	YDR378C	EXO70	P19658	623 aa		4.81	□□□□□ -1.64
LSM6	YDR378C	REC107	P21651	314 aa		4.81	□□□□□ -1.64
LSM6	YDR378C	YCR007C	P25354	239 aa		4.81	□□□□□ -1.64
LSM6	YDR378C	AFG1	P32317	509 aa		4.81	□□□□□ -1.64
LSM6	YDR378C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
LSM6	YDR378C	DLD2	P46681	530 aa	Known RBP	4.81	□□□□□ -1.64
LSM6	YDR378C	OCA1	P50946	238 aa	Predicted RBP	4.81	□□□□□ -1.64
LSM6	YDR378C	YGL108C	P53139	140 aa		4.81	□□□□□ -1.64
LSM6	YDR378C	GPI1	P53306	609 aa		4.81	□□□□□ -1.64
LSM6	YDR378C	GIR2	Q03768	265 aa	Predicted RBP	4.81	□□□□□ -1.64
LSM6	YDR378C	PHO92	Q06390	306 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms