RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W PCL7P40186 285 aa2.44□□□□□ -2.02
SWR1YDR334W SDS3P40505 327 aa2.44□□□□□ -2.02
SWR1YDR334W SEC27P41811 889 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W TEP1P53916 434 aa2.44□□□□□ -2.02
SWR1YDR334W ALO1P54783 526 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W MET14Q02196 202 aa2.44□□□□□ -2.02
SWR1YDR334W YMR279CQ03263 540 aa2.44□□□□□ -2.02
SWR1YDR334W GIS1Q03833 894 aa2.44□□□□□ -2.02
SWR1YDR334W DLT1Q04216 342 aa2.44□□□□□ -2.02
SWR1YDR334W TUS1Q06412 1307 aa2.44□□□□□ -2.02
SWR1YDR334W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
SWR1YDR334W CSM4Q08955 156 aa2.44□□□□□ -2.02
SWR1YDR334W RRI1Q12468 440 aa2.44□□□□□ -2.02
SWR1YDR334W MEX67Q99257 599 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W YOR304C-AO14468 76 aa2.44□□□□□ -2.02
SWR1YDR334W NFT1P0CE68 1218 aa2.44□□□□□ -2.02
SWR1YDR334W MCM3P24279 971 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W SDH3P33421 198 aa2.44□□□□□ -2.02
SWR1YDR334W SRB2P34162 210 aa2.44□□□□□ -2.02
SWR1YDR334W NUP133P36161 1157 aa2.44□□□□□ -2.02
SWR1YDR334W PEX32P38292 413 aa2.44□□□□□ -2.02
SWR1YDR334W RPF1P38805 295 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W ARO9P38840 513 aaPredicted RBP2.44□□□□□ -2.02
SWR1YDR334W MPT5P39016 859 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
SWR1YDR334W STL1P39932 569 aa2.44□□□□□ -2.02
SWR1YDR334W PZF1P39933 429 aa2.44□□□□□ -2.02
SWR1YDR334W YIL108WP40483 696 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W SEC28P40509 296 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W PFA3P42836 336 aa2.44□□□□□ -2.02
SWR1YDR334W BIT61P47041 543 aa2.44□□□□□ -2.02
SWR1YDR334W YJR141WP47172 347 aaPredicted RBP2.44□□□□□ -2.02
SWR1YDR334W YNR061CP53747 219 aa2.44□□□□□ -2.02
SWR1YDR334W OSH6Q02201 448 aa2.44□□□□□ -2.02
SWR1YDR334W KAP120Q02932 1032 aa2.44□□□□□ -2.02
SWR1YDR334W TFC6Q06339 672 aa2.44□□□□□ -2.02
SWR1YDR334W NMD4Q12129 218 aa2.44□□□□□ -2.02
SWR1YDR334W NDJ1Q12366 352 aa2.44□□□□□ -2.02
SWR1YDR334W GAL1P04385 528 aa2.44□□□□□ -2.02
SWR1YDR334W SSA3P09435 649 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W COX11P19516 300 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W SER1P33330 395 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W TIF3P34167 436 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W YKL222CP35995 705 aa2.44□□□□□ -2.02
SWR1YDR334W TPO5P36029 618 aa2.44□□□□□ -2.02
SWR1YDR334W CBP4P37267 147 aa2.44□□□□□ -2.02
SWR1YDR334W YIR042CP40586 236 aa2.44□□□□□ -2.02
SWR1YDR334W QRI1P43123 477 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W GLG2P47011 380 aa2.44□□□□□ -2.02
SWR1YDR334W RPS7BP48164 190 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W YPT11P48559 417 aa2.44□□□□□ -2.02
SWR1YDR334W IMD4P50094 524 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W YNR066CP53752 436 aa2.44□□□□□ -2.02
SWR1YDR334W AAH1P53909 347 aa2.44□□□□□ -2.02
SWR1YDR334W IDP3P53982 420 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W PRO2P54885 456 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W KIN4Q01919 800 aa2.44□□□□□ -2.02
SWR1YDR334W TRM44Q02648 567 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W DIG1Q03063 452 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W CAB5Q03941 241 aa2.44□□□□□ -2.02
SWR1YDR334W ECM11Q04110 302 aa2.44□□□□□ -2.02
SWR1YDR334W YKU80Q04437 629 aa2.44□□□□□ -2.02
SWR1YDR334W SWF1Q04629 336 aa2.44□□□□□ -2.02
SWR1YDR334W COQ11Q05892 277 aa2.44□□□□□ -2.02
SWR1YDR334W STE23Q06010 1027 aa2.44□□□□□ -2.02
SWR1YDR334W BUD7Q08754 746 aa2.44□□□□□ -2.02
SWR1YDR334W RAD7P06779 565 aa2.43□□□□□ -2.02
SWR1YDR334W RPS24AP0CX31 135 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W RPS24BP0CX32 135 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W VPS33P20795 691 aa2.43□□□□□ -2.02
SWR1YDR334W RNR1P21524 888 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W MAG1P22134 296 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W RPA135P22138 1203 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W KIN82P25341 720 aa2.43□□□□□ -2.02
SWR1YDR334W MTC7P32633 139 aa2.43□□□□□ -2.02
SWR1YDR334W ARC19P33204 171 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W YKR015CP36111 568 aa2.43□□□□□ -2.02
SWR1YDR334W SHR5P41912 237 aa2.43□□□□□ -2.02
SWR1YDR334W BUD13P46947 266 aaPredicted RBP2.43□□□□□ -2.02
SWR1YDR334W LYS4P49367 693 aaPredicted RBP2.43□□□□□ -2.02
SWR1YDR334W PYK2P52489 506 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W YGR054WP53235 642 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W REX2P54964 269 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W PRM15Q03262 622 aa2.43□□□□□ -2.02
SWR1YDR334W RVB1Q03940 463 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W YLR287CQ05881 355 aa2.43□□□□□ -2.02
SWR1YDR334W NSE1Q07913 336 aa2.43□□□□□ -2.02
SWR1YDR334W PRP46Q12417 451 aaPredicted RBP2.43□□□□□ -2.02
SWR1YDR334W ERP4Q12450 207 aa2.43□□□□□ -2.02
SWR1YDR334W RPS17AP02407 136 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W RPL7AP05737 244 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W PYC1P11154 1178 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W RPS17BP14127 136 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W GRX2P17695 143 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W LRE1P25579 583 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W DOA4P32571 926 aa2.43□□□□□ -2.02
SWR1YDR334W VMA8P32610 256 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W SPP381P38282 291 aaPredicted RBP2.43□□□□□ -2.02
SWR1YDR334W YFL052WP43551 465 aa2.43□□□□□ -2.02
SWR1YDR334W BNA3P47039 444 aaKnown RBP2.43□□□□□ -2.02
SWR1YDR334W CLD1P53264 445 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms