RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	ARG81	P05085	880 aa		4.1	□□□□□ -1.75
HIM1	YDR317W	GID7	P25569	745 aa		4.1	□□□□□ -1.75
HIM1	YDR317W	PDB1	P32473	366 aa	Known RBP	4.1	□□□□□ -1.75
HIM1	YDR317W	RPN2	P32565	945 aa	Known RBP	4.1	□□□□□ -1.75
HIM1	YDR317W	PRS1	P32895	427 aa	Known RBP	4.1	□□□□□ -1.75
HIM1	YDR317W	SNU114	P36048	1008 aa	Known RBP	4.1	□□□□□ -1.75
HIM1	YDR317W	MIC60	P36112	540 aa		4.1	□□□□□ -1.75
HIM1	YDR317W	DBP8	P38719	431 aa		4.1	□□□□□ -1.75
HIM1	YDR317W	ARC1	P46672	376 aa	Known RBP	4.1	□□□□□ -1.75
HIM1	YDR317W	RPS7B	P48164	190 aa	Known RBP	4.1	□□□□□ -1.75
HIM1	YDR317W	EMI2	Q04409	500 aa	Known RBP	4.1	□□□□□ -1.75
HIM1	YDR317W	INM2	Q05533	292 aa		4.1	□□□□□ -1.75
HIM1	YDR317W	ATG26	Q06321	1198 aa		4.1	□□□□□ -1.75
HIM1	YDR317W	OPY2	Q06810	360 aa		4.1	□□□□□ -1.75
HIM1	YDR317W	NKP1	Q12493	238 aa		4.1	□□□□□ -1.75
HIM1	YDR317W	CSR2	Q12734	1121 aa		4.1	□□□□□ -1.75
HIM1	YDR317W	GLN3	P18494	730 aa		4.09	□□□□□ -1.75
HIM1	YDR317W	ADH7	P25377	361 aa		4.09	□□□□□ -1.75
HIM1	YDR317W	PTK1	P36002	662 aa	Predicted RBP	4.09	□□□□□ -1.75
HIM1	YDR317W	RTS1	P38903	757 aa		4.09	□□□□□ -1.75
HIM1	YDR317W	CCT4	P39078	528 aa	Known RBP	4.09	□□□□□ -1.75
HIM1	YDR317W	PHO90	P39535	881 aa		4.09	□□□□□ -1.75
HIM1	YDR317W	AFG3	P39925	761 aa		4.09	□□□□□ -1.75
HIM1	YDR317W	YER130C	P39959	443 aa		4.09	□□□□□ -1.75
HIM1	YDR317W	RGI2	P40188	164 aa		4.09	□□□□□ -1.75
HIM1	YDR317W	RPS10B	P46784	105 aa	Known RBP	4.09	□□□□□ -1.75
HIM1	YDR317W	ATG27	P46989	271 aa		4.09	□□□□□ -1.75
HIM1	YDR317W	RPS10A	Q08745	105 aa	Predicted RBP	4.09	□□□□□ -1.75
HIM1	YDR317W	LEU9	Q12166	604 aa	Known RBP	4.09	□□□□□ -1.75
HIM1	YDR317W	FIG2	P25653	1609 aa		4.09	□□□□□ -1.76
HIM1	YDR317W	TOM1	Q03280	3268 aa		4.09	□□□□□ -1.76
HIM1	YDR317W	PHO2	P07269	559 aa		4.08	□□□□□ -1.76
HIM1	YDR317W	FLO11	P08640	1367 aa		4.08	□□□□□ -1.76
HIM1	YDR317W	YBL029W	P38201	376 aa		4.08	□□□□□ -1.76
HIM1	YDR317W	ERG7	P38604	731 aa		4.08	□□□□□ -1.76
HIM1	YDR317W	PTR3	P43606	678 aa		4.08	□□□□□ -1.76
HIM1	YDR317W	YGL242C	P53066	181 aa		4.08	□□□□□ -1.76
HIM1	YDR317W	MLC1	P53141	149 aa		4.08	□□□□□ -1.76
HIM1	YDR317W	CUL3	P53202	744 aa		4.08	□□□□□ -1.76
HIM1	YDR317W	YGR127W	P53275	312 aa		4.08	□□□□□ -1.76
HIM1	YDR317W	RAD30	Q04049	632 aa		4.08	□□□□□ -1.76
HIM1	YDR317W	ENT4	Q07872	247 aa		4.08	□□□□□ -1.76
HIM1	YDR317W	TIP41	Q12199	356 aa		4.08	□□□□□ -1.76
HIM1	YDR317W	PDR18	P53756	1333 aa		4.07	□□□□□ -1.76
HIM1	YDR317W	CYB2	P00175	591 aa		4.07	□□□□□ -1.76
HIM1	YDR317W	MCM4	P30665	933 aa	Known RBP	4.07	□□□□□ -1.76
HIM1	YDR317W	YNK1	P36010	153 aa	Known RBP	4.07	□□□□□ -1.76
HIM1	YDR317W	ROT2	P38138	954 aa		4.07	□□□□□ -1.76
HIM1	YDR317W	RBA50	Q04418	439 aa		4.07	□□□□□ -1.76
HIM1	YDR317W	ECM30	Q06673	1274 aa		4.07	□□□□□ -1.76
HIM1	YDR317W	VIP1	Q06685	1146 aa	Known RBP	4.07	□□□□□ -1.76
HIM1	YDR317W	SNF3	P10870	884 aa		4.06	□□□□□ -1.76
HIM1	YDR317W	RPS2	P25443	254 aa	Known RBP	4.06	□□□□□ -1.76
HIM1	YDR317W	APE3	P37302	537 aa	Known RBP	4.06	□□□□□ -1.76
HIM1	YDR317W	MAL33	P38157	468 aa		4.06	□□□□□ -1.76
HIM1	YDR317W	YBL028C	P38202	106 aa		4.06	□□□□□ -1.76
HIM1	YDR317W	TSC10	P38342	320 aa		4.06	□□□□□ -1.76
HIM1	YDR317W	ELO1	P39540	310 aa		4.06	□□□□□ -1.76
HIM1	YDR317W	YIR014W	P40570	242 aa		4.06	□□□□□ -1.76
HIM1	YDR317W	GUF1	P46943	645 aa		4.06	□□□□□ -1.76
HIM1	YDR317W	SGM1	P47166	707 aa		4.06	□□□□□ -1.76
HIM1	YDR317W	ERG26	P53199	349 aa	Known RBP	4.06	□□□□□ -1.76
HIM1	YDR317W	SOL4	P53315	255 aa		4.06	□□□□□ -1.76
HIM1	YDR317W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
HIM1	YDR317W	BUD22	Q04347	519 aa	Known RBP	4.06	□□□□□ -1.76
HIM1	YDR317W	TMA64	Q04600	565 aa	Known RBP	4.06	□□□□□ -1.76
HIM1	YDR317W	SSK1	Q07084	712 aa		4.06	□□□□□ -1.76
HIM1	YDR317W	DUR1,2	P32528	1835 aa	Known RBP	4.06	□□□□□ -1.76
HIM1	YDR317W	PWP1	P21304	576 aa	Known RBP	4.05	□□□□□ -1.76
HIM1	YDR317W	SGV1	P23293	657 aa	Known RBP	4.05	□□□□□ -1.76
HIM1	YDR317W	RIM2	P38127	377 aa		4.05	□□□□□ -1.76
HIM1	YDR317W	UBA4	P38820	440 aa		4.05	□□□□□ -1.76
HIM1	YDR317W	DPH1	P40487	425 aa	Known RBP	4.05	□□□□□ -1.76
HIM1	YDR317W	SIP4	P46954	829 aa		4.05	□□□□□ -1.76
HIM1	YDR317W	CRZ1	P53968	678 aa		4.05	□□□□□ -1.76
HIM1	YDR317W	YMR160W	Q03823	816 aa		4.05	□□□□□ -1.76
HIM1	YDR317W	DPB4	Q04603	196 aa	Known RBP	4.05	□□□□□ -1.76
HIM1	YDR317W	DAP1	Q12091	152 aa		4.05	□□□□□ -1.76
HIM1	YDR317W	HUA2	Q12134	243 aa		4.05	□□□□□ -1.76
HIM1	YDR317W	PDA1	P16387	420 aa	Known RBP	4.04	□□□□□ -1.76
HIM1	YDR317W	CMK1	P27466	446 aa	Known RBP	4.04	□□□□□ -1.76
HIM1	YDR317W	SNC1	P31109	117 aa		4.04	□□□□□ -1.76
HIM1	YDR317W	PHD1	P36093	366 aa		4.04	□□□□□ -1.76
HIM1	YDR317W	AUR1	P36107	401 aa	Predicted RBP	4.04	□□□□□ -1.76
HIM1	YDR317W	ICS2	P38284	255 aa		4.04	□□□□□ -1.76
HIM1	YDR317W	OSH3	P38713	996 aa	Known RBP	4.04	□□□□□ -1.76
HIM1	YDR317W	KEL1	P38853	1164 aa	Known RBP	4.04	□□□□□ -1.76
HIM1	YDR317W	YJL068C	P40363	299 aa		4.04	□□□□□ -1.76
HIM1	YDR317W	LYS14	P40971	790 aa		4.04	□□□□□ -1.76
HIM1	YDR317W	FAR3	P46671	204 aa		4.04	□□□□□ -1.76
HIM1	YDR317W	RTT103	Q05543	409 aa		4.04	□□□□□ -1.76
HIM1	YDR317W	FMP45	Q07651	309 aa		4.04	□□□□□ -1.76
HIM1	YDR317W	GRC3	Q07845	632 aa		4.04	□□□□□ -1.76
HIM1	YDR317W	TEN1	Q07921	160 aa		4.04	□□□□□ -1.76
HIM1	YDR317W	ETT1	Q08421	412 aa	Known RBP	4.04	□□□□□ -1.76
HIM1	YDR317W	KEL3	Q08979	651 aa	Predicted RBP	4.04	□□□□□ -1.76
HIM1	YDR317W	ARP6	Q12509	438 aa		4.04	□□□□□ -1.76
HIM1	YDR317W	GSC2	P40989	1895 aa		4.03	□□□□□ -1.76
HIM1	YDR317W	PUT2	P07275	575 aa		4.03	□□□□□ -1.76
HIM1	YDR317W	MRS3	P10566	314 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms