RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W TFA2P36145 328 aa1.66□□□□□ -2.14
CFT1YDR301W GIP1P38229 639 aa1.66□□□□□ -2.14
CFT1YDR301W YHR112CP38716 378 aa1.66□□□□□ -2.14
CFT1YDR301W GIC1P38785 314 aa1.66□□□□□ -2.14
CFT1YDR301W FRT2P39734 528 aa1.66□□□□□ -2.14
CFT1YDR301W RPS26AP39938 119 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W RPS26BP39939 119 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W RSP5P39940 809 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W YJL070CP40361 888 aa1.66□□□□□ -2.14
CFT1YDR301W FKH2P41813 862 aa1.66□□□□□ -2.14
CFT1YDR301W YFR020WP43600 232 aa1.66□□□□□ -2.14
CFT1YDR301W CNN1P43618 361 aa1.66□□□□□ -2.14
CFT1YDR301W BIO5P53744 561 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W RMI1Q02685 241 aa1.66□□□□□ -2.14
CFT1YDR301W TY2A-DR2Q03483 438 aa1.66□□□□□ -2.14
CFT1YDR301W GOT1Q03554 138 aa1.66□□□□□ -2.14
CFT1YDR301W HPT1Q04178 221 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W VTA1Q06263 330 aa1.66□□□□□ -2.14
CFT1YDR301W VAM6Q07468 1049 aa1.66□□□□□ -2.14
CFT1YDR301W IOC2Q12072 812 aa1.66□□□□□ -2.14
CFT1YDR301W NSL1Q12143 216 aa1.66□□□□□ -2.14
CFT1YDR301W TY2A-BQ12260 438 aa1.66□□□□□ -2.14
CFT1YDR301W TY2A-OR2Q12293 438 aa1.66□□□□□ -2.14
CFT1YDR301W GLO4Q12320 285 aa1.66□□□□□ -2.14
CFT1YDR301W SUL2Q12325 893 aa1.66□□□□□ -2.14
CFT1YDR301W TY2A-DR1Q12392 438 aa1.66□□□□□ -2.14
CFT1YDR301W TY2A-OR1Q12439 438 aa1.66□□□□□ -2.14
CFT1YDR301W YCL012CQ8J0M4 134 aa1.66□□□□□ -2.14
CFT1YDR301W TY2A-DR3Q99303 438 aa1.66□□□□□ -2.14
CFT1YDR301W SAS5Q99314 248 aa1.66□□□□□ -2.14
CFT1YDR301W POL30P15873 258 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W RBK1P25332 333 aa1.66□□□□□ -2.14
CFT1YDR301W CTS1P29029 562 aa1.66□□□□□ -2.14
CFT1YDR301W THI4P32318 326 aa1.66□□□□□ -2.14
CFT1YDR301W TFB1P32776 642 aa1.66□□□□□ -2.14
CFT1YDR301W PTM1P32857 523 aa1.66□□□□□ -2.14
CFT1YDR301W KKQ8P36004 724 aa1.66□□□□□ -2.14
CFT1YDR301W YBR062CP38239 180 aa1.66□□□□□ -2.14
CFT1YDR301W ATG14P38270 344 aa1.66□□□□□ -2.14
CFT1YDR301W LRP1P38801 184 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W AIM46P38885 310 aa1.66□□□□□ -2.14
CFT1YDR301W DSS1P39112 969 aa1.66□□□□□ -2.14
CFT1YDR301W NDE1P40215 560 aa1.66□□□□□ -2.14
CFT1YDR301W ATG36P46983 293 aa1.66□□□□□ -2.14
CFT1YDR301W CLD1P53264 445 aa1.66□□□□□ -2.14
CFT1YDR301W NOP19P53317 196 aaPredicted RBP1.66□□□□□ -2.14
CFT1YDR301W CAF120P53836 1060 aa1.66□□□□□ -2.14
CFT1YDR301W PRP38Q00723 242 aaPredicted RBP1.66□□□□□ -2.14
CFT1YDR301W YMR209CQ03648 457 aa1.66□□□□□ -2.14
CFT1YDR301W ROT1Q03691 256 aa1.66□□□□□ -2.14
CFT1YDR301W SPC19Q03954 165 aa1.66□□□□□ -2.14
CFT1YDR301W YML053CQ04978 212 aa1.66□□□□□ -2.14
CFT1YDR301W SSQ1Q05931 657 aaPredicted RBP1.66□□□□□ -2.14
CFT1YDR301W GIC2Q06648 383 aa1.66□□□□□ -2.14
CFT1YDR301W YEH1Q07804 573 aa1.66□□□□□ -2.14
CFT1YDR301W ENT4Q07872 247 aa1.66□□□□□ -2.14
CFT1YDR301W PUS9Q12069 462 aa1.66□□□□□ -2.14
CFT1YDR301W COX3P00420 269 aa1.66□□□□□ -2.14
CFT1YDR301W SEC53P07283 254 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W MOD5P07884 428 aa1.66□□□□□ -2.14
CFT1YDR301W FUM1P08417 488 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W CBS2P14905 389 aa1.66□□□□□ -2.14
CFT1YDR301W PHO81P17442 1178 aa1.66□□□□□ -2.14
CFT1YDR301W BAS1P22035 811 aa1.66□□□□□ -2.14
CFT1YDR301W YSC84P32793 468 aa1.66□□□□□ -2.14
CFT1YDR301W CBF5P33322 483 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
CFT1YDR301W HES1P35843 434 aa1.66□□□□□ -2.14
CFT1YDR301W YKL077WP36081 392 aa1.66□□□□□ -2.14
CFT1YDR301W PCL5P38794 229 aa1.66□□□□□ -2.14
CFT1YDR301W YHR127WP38833 243 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W YJL206CP39529 758 aa1.66□□□□□ -2.14
CFT1YDR301W GIM4P40005 111 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W VNX1P42839 908 aa1.66□□□□□ -2.14
CFT1YDR301W FAR3P46671 204 aa1.66□□□□□ -2.14
CFT1YDR301W SKP1P52286 194 aa1.66□□□□□ -2.14
CFT1YDR301W COG7P53195 279 aa1.66□□□□□ -2.14
CFT1YDR301W ARP4P80428 489 aa1.66□□□□□ -2.14
CFT1YDR301W OSH6Q02201 448 aa1.66□□□□□ -2.14
CFT1YDR301W SLU7Q02775 382 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W TRM82Q03774 444 aa1.66□□□□□ -2.14
CFT1YDR301W HMO1Q03973 246 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W YKU80Q04437 629 aa1.66□□□□□ -2.14
CFT1YDR301W DAL4Q04895 635 aa1.66□□□□□ -2.14
CFT1YDR301W ESA1Q08649 445 aa1.66□□□□□ -2.14
CFT1YDR301W TRM8Q12009 286 aa1.66□□□□□ -2.14
CFT1YDR301W LEU9Q12166 604 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W NAG1Q8TGN9 163 aa1.66□□□□□ -2.14
CFT1YDR301W CAR1P00812 333 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W HXK2P04807 486 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W ARD1P07347 238 aaPredicted RBP1.66□□□□□ -2.14
CFT1YDR301W GAL7P08431 366 aa1.66□□□□□ -2.14
CFT1YDR301W TUB1P09733 447 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W LAT1P12695 482 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W TOP3P13099 656 aa1.66□□□□□ -2.14
CFT1YDR301W GUK1P15454 187 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W ERG6P25087 383 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W ATP7P30902 174 aa1.66□□□□□ -2.14
CFT1YDR301W STE14P32584 239 aa1.66□□□□□ -2.14
CFT1YDR301W CUE2P36075 443 aaKnown RBP1.66□□□□□ -2.14
CFT1YDR301W SER33P40510 469 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 124.4 ms