RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W RRP3P38712 501 aaKnown RBP1.75□□□□□ -2.13
MSH5YDL154W OTU2P38747 307 aaKnown RBP1.75□□□□□ -2.13
MSH5YDL154W YMR124WP39523 943 aaKnown RBP1.75□□□□□ -2.13
MSH5YDL154W TPA1P40032 644 aaKnown RBP1.75□□□□□ -2.13
MSH5YDL154W SGN1P40561 250 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
MSH5YDL154W CDC1P40986 491 aa1.75□□□□□ -2.13
MSH5YDL154W GPD2P41911 440 aaKnown RBP1.75□□□□□ -2.13
MSH5YDL154W NET1P47035 1189 aa1.75□□□□□ -2.13
MSH5YDL154W PET130P47065 347 aa1.75□□□□□ -2.13
MSH5YDL154W MNP1P53163 194 aaPredicted RBP1.75□□□□□ -2.13
MSH5YDL154W CAF130P53280 1122 aaPredicted RBP1.75□□□□□ -2.13
MSH5YDL154W ATG9Q12142 997 aa1.75□□□□□ -2.13
MSH5YDL154W MRP13P12686 339 aa1.75□□□□□ -2.13
MSH5YDL154W MBR1P23493 339 aa1.75□□□□□ -2.13
MSH5YDL154W GPI10P30777 616 aa1.75□□□□□ -2.13
MSH5YDL154W TCD2P36101 447 aaKnown RBP1.75□□□□□ -2.13
MSH5YDL154W TSC10P38342 320 aa1.75□□□□□ -2.13
MSH5YDL154W TOM71P38825 639 aaKnown RBP1.75□□□□□ -2.13
MSH5YDL154W LTP1P40347 161 aa1.75□□□□□ -2.13
MSH5YDL154W SSU1P41930 458 aa1.75□□□□□ -2.13
MSH5YDL154W YGL082WP53155 381 aa1.75□□□□□ -2.13
MSH5YDL154W ARE2P53629 642 aaKnown RBP1.75□□□□□ -2.13
MSH5YDL154W SMM1P53720 384 aaKnown RBP1.75□□□□□ -2.13
MSH5YDL154W IZH1Q03419 316 aa1.75□□□□□ -2.13
MSH5YDL154W YDR415CQ04033 374 aaPredicted RBP1.75□□□□□ -2.13
MSH5YDL154W PIG1Q06216 648 aa1.75□□□□□ -2.13
MSH5YDL154W ATG29Q12092 213 aa1.75□□□□□ -2.13
MSH5YDL154W SCM3Q12334 223 aa1.75□□□□□ -2.13
MSH5YDL154W RTN2Q12443 393 aa1.75□□□□□ -2.13
MSH5YDL154W SPE4Q12455 300 aa1.75□□□□□ -2.13
MSH5YDL154W YKL100CP34248 587 aa1.74□□□□□ -2.13
MSH5YDL154W MIA40P36046 403 aa1.74□□□□□ -2.13
MSH5YDL154W BOP3P53958 396 aa1.74□□□□□ -2.13
MSH5YDL154W GIR2Q03768 265 aaPredicted RBP1.74□□□□□ -2.13
MSH5YDL154W YMR155WQ03795 547 aa1.74□□□□□ -2.13
MSH5YDL154W YMR160WQ03823 816 aa1.74□□□□□ -2.13
MSH5YDL154W ECI1Q05871 280 aa1.74□□□□□ -2.13
MSH5YDL154W ATG26Q06321 1198 aa1.74□□□□□ -2.13
MSH5YDL154W YDL057WQ07379 328 aa1.74□□□□□ -2.13
MSH5YDL154W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
MSH5YDL154W RLM1Q12224 676 aa1.74□□□□□ -2.13
MSH5YDL154W ISA2Q12425 185 aa1.74□□□□□ -2.13
MSH5YDL154W SNF3P10870 884 aa1.74□□□□□ -2.13
MSH5YDL154W RPL3P14126 387 aaKnown RBP1.74□□□□□ -2.13
MSH5YDL154W STE50P25344 346 aa1.74□□□□□ -2.13
MSH5YDL154W PUP3P25451 205 aaKnown RBP1.74□□□□□ -2.13
MSH5YDL154W GAC1P28006 793 aa1.74□□□□□ -2.13
MSH5YDL154W MCM4P30665 933 aaKnown RBP1.74□□□□□ -2.13
MSH5YDL154W CBP4P37267 147 aa1.74□□□□□ -2.13
MSH5YDL154W SRP72P38688 640 aaKnown RBP1.74□□□□□ -2.13
MSH5YDL154W SNG1P46950 547 aa1.74□□□□□ -2.13
MSH5YDL154W ASI1P54074 624 aa1.74□□□□□ -2.13
MSH5YDL154W CTL1Q03220 320 aaKnown RBP1.74□□□□□ -2.13
MSH5YDL154W PDS5Q04264 1277 aa1.74□□□□□ -2.13
MSH5YDL154W YOL159CQ08300 171 aa1.74□□□□□ -2.13
MSH5YDL154W ETT1Q08421 412 aaKnown RBP1.74□□□□□ -2.13
MSH5YDL154W YLR112WQ12130 139 aa1.74□□□□□ -2.13
MSH5YDL154W ERP4Q12450 207 aa1.74□□□□□ -2.13
MSH5YDL154W TAD3Q9URQ3 322 aa1.74□□□□□ -2.13
MSH5YDL154W GAL4P04386 881 aa1.73□□□□□ -2.13
MSH5YDL154W CBP1P07252 654 aa1.73□□□□□ -2.13
MSH5YDL154W YKL023WP36103 277 aaKnown RBP1.73□□□□□ -2.13
MSH5YDL154W MIC60P36112 540 aa1.73□□□□□ -2.13
MSH5YDL154W LAG1P38703 411 aa1.73□□□□□ -2.13
MSH5YDL154W MSR1P38714 643 aa1.73□□□□□ -2.13
MSH5YDL154W MET18P40469 1032 aa1.73□□□□□ -2.13
MSH5YDL154W CFD1P40558 293 aa1.73□□□□□ -2.13
MSH5YDL154W HXT14P42833 540 aa1.73□□□□□ -2.13
MSH5YDL154W MDV1P47025 714 aa1.73□□□□□ -2.13
MSH5YDL154W TWF1P53250 332 aa1.73□□□□□ -2.13
MSH5YDL154W OGG1P53397 376 aaPredicted RBP1.73□□□□□ -2.13
MSH5YDL154W YNL181WP53878 407 aa1.73□□□□□ -2.13
MSH5YDL154W SHR3Q02774 210 aa1.73□□□□□ -2.13
MSH5YDL154W MRPL1Q04599 285 aa1.73□□□□□ -2.13
MSH5YDL154W SSK1Q07084 712 aa1.73□□□□□ -2.13
MSH5YDL154W GSH2Q08220 491 aa1.73□□□□□ -2.13
MSH5YDL154W TY4B-HP0C2J7 1802 aa1.73□□□□□ -2.13
MSH5YDL154W RAV1P47104 1357 aa1.73□□□□□ -2.13
MSH5YDL154W PUT2P07275 575 aa1.73□□□□□ -2.13
MSH5YDL154W KGD1P20967 1014 aaKnown RBP1.73□□□□□ -2.13
MSH5YDL154W CLB2P24869 491 aa1.73□□□□□ -2.13
MSH5YDL154W ROX1P25042 368 aa1.73□□□□□ -2.13
MSH5YDL154W BUD5P25300 642 aaPredicted RBP1.73□□□□□ -2.13
MSH5YDL154W TIF3P34167 436 aaKnown RBP1.73□□□□□ -2.13
MSH5YDL154W YNK1P36010 153 aaKnown RBP1.73□□□□□ -2.13
MSH5YDL154W NUP133P36161 1157 aa1.73□□□□□ -2.13
MSH5YDL154W YEL057CP39983 233 aa1.73□□□□□ -2.13
MSH5YDL154W YIL060WP40519 144 aa1.73□□□□□ -2.13
MSH5YDL154W ALK1P43633 760 aaKnown RBP1.73□□□□□ -2.13
MSH5YDL154W ROK1P45818 564 aaPredicted RBP1.73□□□□□ -2.13
MSH5YDL154W LYS20P48570 428 aaKnown RBP1.73□□□□□ -2.13
MSH5YDL154W SOL4P53315 255 aa1.73□□□□□ -2.13
MSH5YDL154W VTC3Q02725 835 aa1.73□□□□□ -2.13
MSH5YDL154W FIN1Q03898 291 aa1.73□□□□□ -2.13
MSH5YDL154W TAF11Q04226 346 aa1.73□□□□□ -2.13
MSH5YDL154W HER1Q12276 1246 aa1.73□□□□□ -2.13
MSH5YDL154W MDM10P18409 493 aa1.72□□□□□ -2.13
MSH5YDL154W CDC60P26637 1090 aaKnown RBP1.72□□□□□ -2.13
MSH5YDL154W TFB1P32776 642 aa1.72□□□□□ -2.13
MSH5YDL154W PMT1P33775 817 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms