RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene RXT3, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RXT3	YDL076C	PMS1	P14242	873 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	PRE4	P30657	266 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	BEM3	P32873	1128 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	YPT7	P32939	208 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	BLI1	P35727	113 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	YLF2	P38746	405 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	GET2	P40056	285 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	MAD2	P40958	196 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	ASN2	P49090	572 aa	Known RBP	4.38	□□□□□ -1.71
RXT3	YDL076C	AMA1	P50082	593 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	YGL108C	P53139	140 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	MTL1	P53214	551 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	YNR071C	P53757	342 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	CSL4	P53859	292 aa	Predicted RBP	4.38	□□□□□ -1.71
RXT3	YDL076C	CDC14	Q00684	551 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	YML096W	Q04489	525 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	ARG7	Q04728	441 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	TMA16	Q08687	178 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	AIM41	Q12032	185 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	GPM3	Q12326	303 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	NAG1	Q8TGN9	163 aa		4.38	□□□□□ -1.71
RXT3	YDL076C	NUM1	Q00402	2748 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	RPL1A	P0CX43	217 aa	Known RBP	4.37	□□□□□ -1.71
RXT3	YDL076C	RPL1B	P0CX44	217 aa	Known RBP	4.37	□□□□□ -1.71
RXT3	YDL076C	SEC63	P14906	663 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	CWP1	P28319	239 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	PMT1	P33775	817 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	TOD6	P34219	525 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	LST4	P34239	828 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	SHM2	P37291	469 aa	Known RBP	4.37	□□□□□ -1.71
RXT3	YDL076C	MAK5	P38112	773 aa	Predicted RBP	4.37	□□□□□ -1.71
RXT3	YDL076C	PSY4	P38193	441 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	AIM18	P38884	321 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	SMF1	P38925	575 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	KHA1	P40309	873 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	IST3	P40565	148 aa	Predicted RBP	4.37	□□□□□ -1.71
RXT3	YDL076C	SNG1	P46950	547 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	RFX1	P48743	811 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	EMC4	P53073	190 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	SUN4	P53616	420 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	EFM6	P53970	246 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	EGD1	Q02642	157 aa	Known RBP	4.37	□□□□□ -1.71
RXT3	YDL076C	RLI1	Q03195	608 aa	Known RBP	4.37	□□□□□ -1.71
RXT3	YDL076C	CCE1	Q03702	353 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	DLT1	Q04216	342 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	YDR222W	Q04925	415 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	TRI1	Q05024	226 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	ATG10	Q07879	167 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	SRO7	Q12038	1033 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	SEC39	Q12745	709 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	YOR338W	Q99326	363 aa		4.37	□□□□□ -1.71
RXT3	YDL076C	BRR2	P32639	2163 aa	Known RBP	4.37	□□□□□ -1.71
RXT3	YDL076C	URA3	P03962	267 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	CPA1	P07258	411 aa	Known RBP	4.36	□□□□□ -1.71
RXT3	YDL076C	ABF1	P14164	731 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	STE4	P18851	423 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	DAL82	P21705	255 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	MEI4	P29467	408 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	MVD1	P32377	396 aa	Known RBP	4.36	□□□□□ -1.71
RXT3	YDL076C	MTC7	P32633	139 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	RAD5	P32849	1169 aa	Predicted RBP	4.36	□□□□□ -1.71
RXT3	YDL076C	RMA1	P36001	430 aa	Known RBP	4.36	□□□□□ -1.71
RXT3	YDL076C	UBS1	P38290	277 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	PCA1	P38360	1216 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	HIS2	P38635	335 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	OTU2	P38747	307 aa	Known RBP	4.36	□□□□□ -1.71
RXT3	YDL076C	PIG2	P40187	538 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	PAN6	P40459	309 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	YIL077C	P40508	320 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	SMK1	P41808	388 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	TAH11	P47112	604 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	BIR1	P47134	954 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	TRF5	P48561	642 aa	Known RBP	4.36	□□□□□ -1.71
RXT3	YDL076C	MUP1	P50276	574 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	SWC4	P53201	476 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	YGR127W	P53275	312 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	YGR266W	P53326	701 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	CPR6	P53691	371 aa	Known RBP	4.36	□□□□□ -1.71
RXT3	YDL076C	VPS75	P53853	264 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	EAF7	P53911	425 aa	Known RBP	4.36	□□□□□ -1.71
RXT3	YDL076C	NGL3	Q03210	505 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	CIA1	Q05583	330 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	SWC7	Q06707	132 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	NEW1	Q08972	1196 aa	Known RBP	4.36	□□□□□ -1.71
RXT3	YDL076C	DIN7	Q12086	430 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	IZH4	Q99393	312 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	TEL1	P38110	2787 aa		4.36	□□□□□ -1.71
RXT3	YDL076C	INH1	P01097	85 aa		4.35	□□□□□ -1.71
RXT3	YDL076C	EST1	P17214	699 aa	Predicted RBP	4.35	□□□□□ -1.71
RXT3	YDL076C	SLY1	P22213	666 aa		4.35	□□□□□ -1.71
RXT3	YDL076C	UBA1	P22515	1024 aa	Known RBP	4.35	□□□□□ -1.71
RXT3	YDL076C	ARG1	P22768	420 aa		4.35	□□□□□ -1.71
RXT3	YDL076C	RBK1	P25332	333 aa		4.35	□□□□□ -1.71
RXT3	YDL076C	GFD2	P25370	566 aa	Known RBP	4.35	□□□□□ -1.71
RXT3	YDL076C	DCC1	P25559	380 aa		4.35	□□□□□ -1.71
RXT3	YDL076C	MSP1	P28737	362 aa		4.35	□□□□□ -1.71
RXT3	YDL076C	TFC3	P34111	1160 aa		4.35	□□□□□ -1.71
RXT3	YDL076C	MRPL10	P36520	322 aa		4.35	□□□□□ -1.71
RXT3	YDL076C	MRPL36	P36531	177 aa		4.35	□□□□□ -1.71
RXT3	YDL076C	WSC4	P38739	605 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms