RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C TRM112P53738 135 aaPredicted RBP2.07□□□□□ -2.08
BRE1YDL074C IMP4P53941 290 aaKnown RBP2.07□□□□□ -2.08
BRE1YDL074C YNL033WP53964 284 aa2.07□□□□□ -2.08
BRE1YDL074C YNL019CP53975 284 aa2.07□□□□□ -2.08
BRE1YDL074C ARP4P80428 489 aa2.07□□□□□ -2.08
BRE1YDL074C RPL34AP87262 121 aaPredicted RBP2.07□□□□□ -2.08
BRE1YDL074C YMR178WQ03219 274 aaKnown RBP2.07□□□□□ -2.08
BRE1YDL074C YMR206WQ03695 313 aa2.07□□□□□ -2.08
BRE1YDL074C RCF1Q03713 159 aa2.07□□□□□ -2.08
BRE1YDL074C TAF12Q03761 539 aa2.07□□□□□ -2.08
BRE1YDL074C YDR239CQ03780 787 aa2.07□□□□□ -2.08
BRE1YDL074C VHS1Q03785 461 aa2.07□□□□□ -2.08
BRE1YDL074C YDR131CQ03899 556 aa2.07□□□□□ -2.08
BRE1YDL074C ARG7Q04728 441 aa2.07□□□□□ -2.08
BRE1YDL074C YPR109WQ06104 294 aa2.07□□□□□ -2.08
BRE1YDL074C VAM6Q07468 1049 aa2.07□□□□□ -2.08
BRE1YDL074C HBT1Q07653 1046 aaKnown RBP2.07□□□□□ -2.08
BRE1YDL074C YEH2Q07950 538 aa2.07□□□□□ -2.08
BRE1YDL074C MSH5Q12175 901 aa2.07□□□□□ -2.08
BRE1YDL074C STB3Q12427 513 aa2.07□□□□□ -2.08
BRE1YDL074C YCL012CQ8J0M4 134 aa2.07□□□□□ -2.08
BRE1YDL074C MDM12Q92328 271 aa2.07□□□□□ -2.08
BRE1YDL074C TY4B-PA0A0B7P3V8 1104 aa2.06□□□□□ -2.08
BRE1YDL074C MDM35O60200 86 aa2.06□□□□□ -2.08
BRE1YDL074C RAS2P01120 322 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C REP1P03871 373 aa2.06□□□□□ -2.08
BRE1YDL074C SPT3P06844 337 aa2.06□□□□□ -2.08
BRE1YDL074C SUI3P09064 285 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C RPS4AP0CX35 261 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C RPS4BP0CX36 261 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C GLN4P13188 809 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C MET8P15807 274 aa2.06□□□□□ -2.08
BRE1YDL074C POL30P15873 258 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C PHO81P17442 1178 aa2.06□□□□□ -2.08
BRE1YDL074C SIR1P21691 654 aa2.06□□□□□ -2.08
BRE1YDL074C CIN8P27895 1000 aa2.06□□□□□ -2.08
BRE1YDL074C PEX3P28795 441 aa2.06□□□□□ -2.08
BRE1YDL074C CDC3P32457 520 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C NUF2P33895 451 aa2.06□□□□□ -2.08
BRE1YDL074C UTP11P34247 250 aaPredicted RBP2.06□□□□□ -2.08
BRE1YDL074C RPF2P36160 344 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C SKG1P36169 355 aa2.06□□□□□ -2.08
BRE1YDL074C ROT2P38138 954 aa2.06□□□□□ -2.08
BRE1YDL074C SLM4P38247 162 aa2.06□□□□□ -2.08
BRE1YDL074C FES1P38260 290 aa2.06□□□□□ -2.08
BRE1YDL074C BMT2P38278 337 aa2.06□□□□□ -2.08
BRE1YDL074C TDP1P38319 544 aa2.06□□□□□ -2.08
BRE1YDL074C SAF1P38352 637 aa2.06□□□□□ -2.08
BRE1YDL074C DBP8P38719 431 aa2.06□□□□□ -2.08
BRE1YDL074C DMA1P38823 416 aa2.06□□□□□ -2.08
BRE1YDL074C MTG2P38860 518 aa2.06□□□□□ -2.08
BRE1YDL074C MPT5P39016 859 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08 RIP-Chip
BRE1YDL074C PIK1P39104 1066 aa2.06□□□□□ -2.08
BRE1YDL074C NPT1P39683 429 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C HPM1P40481 377 aa2.06□□□□□ -2.08
BRE1YDL074C MPH1P40562 993 aa2.06□□□□□ -2.08
BRE1YDL074C MSS2P40990 351 aa2.06□□□□□ -2.08
BRE1YDL074C ELP2P42935 788 aa2.06□□□□□ -2.08
BRE1YDL074C FAR7P43592 221 aa2.06□□□□□ -2.08
BRE1YDL074C GLG2P47011 380 aa2.06□□□□□ -2.08
BRE1YDL074C AIM23P47015 356 aa2.06□□□□□ -2.08
BRE1YDL074C MDM34P53083 459 aa2.06□□□□□ -2.08
BRE1YDL074C FLC3P53121 802 aa2.06□□□□□ -2.08
BRE1YDL074C ZRG17P53735 605 aa2.06□□□□□ -2.08
BRE1YDL074C ESF2P53743 316 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C PRM1P53835 661 aa2.06□□□□□ -2.08
BRE1YDL074C YNL140CP53910 189 aa2.06□□□□□ -2.08
BRE1YDL074C SKI8Q02793 397 aaPredicted RBP2.06□□□□□ -2.08
BRE1YDL074C SWP1Q02795 286 aa2.06□□□□□ -2.08
BRE1YDL074C LEE1Q02799 301 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C NAN1Q02931 896 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C RRN5Q02983 363 aa2.06□□□□□ -2.08
BRE1YDL074C EAR1Q03212 550 aa2.06□□□□□ -2.08
BRE1YDL074C HOT1Q03213 719 aa2.06□□□□□ -2.08
BRE1YDL074C GOT1Q03554 138 aa2.06□□□□□ -2.08
BRE1YDL074C TRM12Q04235 462 aa2.06□□□□□ -2.08
BRE1YDL074C SEG1Q04279 960 aa2.06□□□□□ -2.08
BRE1YDL074C GLO2Q05584 274 aa2.06□□□□□ -2.08
BRE1YDL074C DBP9Q06218 594 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C HUA2Q12134 243 aa2.06□□□□□ -2.08
BRE1YDL074C RPN5Q12250 445 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C YLR046CQ12253 270 aa2.06□□□□□ -2.08
BRE1YDL074C NTO1Q12311 748 aa2.06□□□□□ -2.08
BRE1YDL074C SFM1Q12314 213 aa2.06□□□□□ -2.08
BRE1YDL074C RPN6Q12377 434 aa2.06□□□□□ -2.08
BRE1YDL074C DBP10Q12389 995 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C YPL247CQ12523 523 aa2.06□□□□□ -2.08
BRE1YDL074C MHF2Q3E829 80 aa2.06□□□□□ -2.08
BRE1YDL074C SRN2Q99176 213 aa2.06□□□□□ -2.08
BRE1YDL074C PRC1P00729 532 aa2.06□□□□□ -2.08
BRE1YDL074C HXK2P04807 486 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C STE3P06783 470 aa2.06□□□□□ -2.08
BRE1YDL074C TUB1P09733 447 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C SNF4P12904 322 aa2.06□□□□□ -2.08
BRE1YDL074C CBS2P14905 389 aa2.06□□□□□ -2.08
BRE1YDL074C AMD1P15274 810 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C RDS2P19541 446 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C DBP3P20447 523 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C DPB2P24482 689 aaPredicted RBP2.06□□□□□ -2.08
BRE1YDL074C OCA4P25366 362 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms