RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	MTC4	P38335	694 aa	Known RBP	3.88	□□□□□ -1.79
APA1	YCL050C	RPR2	P40571	144 aa		3.88	□□□□□ -1.79
APA1	YCL050C	YDL186W	P48568	277 aa		3.88	□□□□□ -1.79
APA1	YCL050C	IMD4	P50094	524 aa	Known RBP	3.88	□□□□□ -1.79
APA1	YCL050C	RLI1	Q03195	608 aa	Known RBP	3.88	□□□□□ -1.79
APA1	YCL050C	MRPL51	Q06090	140 aa	Predicted RBP	3.88	□□□□□ -1.79
APA1	YCL050C	SYO1	Q07395	620 aa		3.88	□□□□□ -1.79
APA1	YCL050C	YOR365C	Q08844	703 aa		3.88	□□□□□ -1.79
APA1	YCL050C	CTI6	Q08923	506 aa		3.88	□□□□□ -1.79
APA1	YCL050C	YDL009C	Q12210	107 aa		3.88	□□□□□ -1.79
APA1	YCL050C	EXO70	P19658	623 aa		3.87	□□□□□ -1.79
APA1	YCL050C	MCK1	P21965	375 aa	Known RBP	3.87	□□□□□ -1.79
APA1	YCL050C	FRE1	P32791	686 aa		3.87	□□□□□ -1.79
APA1	YCL050C	YME1	P32795	747 aa		3.87	□□□□□ -1.79
APA1	YCL050C	BNA4	P38169	460 aa		3.87	□□□□□ -1.79
APA1	YCL050C	MSR1	P38714	643 aa		3.87	□□□□□ -1.79
APA1	YCL050C	YHR218W	P38899	603 aa		3.87	□□□□□ -1.79
APA1	YCL050C	YGR066C	P53242	292 aa		3.87	□□□□□ -1.79
APA1	YCL050C	SLD5	Q03406	294 aa		3.87	□□□□□ -1.79
APA1	YCL050C	COQ9	Q05779	260 aa		3.87	□□□□□ -1.79
APA1	YCL050C	YJR112W-A	Q3E743	109 aa		3.87	□□□□□ -1.79
APA1	YCL050C	PEP4	P07267	405 aa	Known RBP	3.86	□□□□□ -1.79
APA1	YCL050C	CBS1	P14066	229 aa		3.86	□□□□□ -1.79
APA1	YCL050C	AGA1	P32323	725 aa		3.86	□□□□□ -1.79
APA1	YCL050C	TCD2	P36101	447 aa	Known RBP	3.86	□□□□□ -1.79
APA1	YCL050C	SHO1	P40073	367 aa		3.86	□□□□□ -1.79
APA1	YCL050C	UPF3	P48412	387 aa	Known RBP	3.86	□□□□□ -1.79
APA1	YCL050C	MRX6	P48564	524 aa		3.86	□□□□□ -1.79
APA1	YCL050C	IRC15	Q02733	499 aa		3.86	□□□□□ -1.79
APA1	YCL050C	VPS38	Q05919	439 aa		3.86	□□□□□ -1.79
APA1	YCL050C	RLM1	Q12224	676 aa		3.86	□□□□□ -1.79
APA1	YCL050C	AYT1	Q12226	474 aa		3.86	□□□□□ -1.79
APA1	YCL050C	LSP1	Q12230	341 aa	Known RBP	3.86	□□□□□ -1.79
APA1	YCL050C	AMD1	P15274	810 aa	Known RBP	3.85	□□□□□ -1.79
APA1	YCL050C	YCR007C	P25354	239 aa		3.85	□□□□□ -1.79
APA1	YCL050C	UTR4	P32626	227 aa		3.85	□□□□□ -1.79
APA1	YCL050C	LOS1	P33418	1100 aa	Predicted RBP	3.85	□□□□□ -1.79
APA1	YCL050C	ELP2	P42935	788 aa		3.85	□□□□□ -1.79
APA1	YCL050C	YJL132W	P47014	750 aa		3.85	□□□□□ -1.79
APA1	YCL050C	DRN1	P53255	507 aa	Known RBP	3.85	□□□□□ -1.79
APA1	YCL050C	BNA5	Q05979	453 aa		3.85	□□□□□ -1.79
APA1	YCL050C	VPS74	Q06385	345 aa		3.85	□□□□□ -1.79
APA1	YCL050C	PHO92	Q06390	306 aa		3.85	□□□□□ -1.79
APA1	YCL050C	AVL9	Q12500	764 aa		3.85	□□□□□ -1.79
APA1	YCL050C	GAL80	P04387	435 aa		3.84	□□□□□ -1.79
APA1	YCL050C	TUL1	P36096	758 aa		3.84	□□□□□ -1.79
APA1	YCL050C	TCM62	P38228	572 aa	Known RBP	3.84	□□□□□ -1.79
APA1	YCL050C	TIF4631	P39935	952 aa	Known RBP	3.84	□□□□□ -1.79
APA1	YCL050C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.84	□□□□□ -1.79	not detected
APA1	YCL050C	RMD8	P43620	662 aa		3.84	□□□□□ -1.79
APA1	YCL050C	COS10	P52924	374 aa		3.84	□□□□□ -1.79
APA1	YCL050C	GPI1	P53306	609 aa		3.84	□□□□□ -1.79
APA1	YCL050C	SVL3	Q03088	825 aa	Known RBP	3.84	□□□□□ -1.79
APA1	YCL050C	FIN1	Q03898	291 aa		3.84	□□□□□ -1.79
APA1	YCL050C	SUC2	P00724	532 aa		3.83	□□□□□ -1.8
APA1	YCL050C	GCN4	P03069	281 aa		3.83	□□□□□ -1.8
APA1	YCL050C	PMU1	P36069	295 aa		3.83	□□□□□ -1.8
APA1	YCL050C	YBR139W	P38109	508 aa		3.83	□□□□□ -1.8
APA1	YCL050C	DUG2	P38149	878 aa		3.83	□□□□□ -1.8
APA1	YCL050C	ALG8	P40351	577 aa		3.83	□□□□□ -1.8
APA1	YCL050C	DOT5	P40553	215 aa		3.83	□□□□□ -1.8
APA1	YCL050C	ZPR1	P53303	486 aa	Known RBP	3.83	□□□□□ -1.8
APA1	YCL050C	HEF3	P53978	1044 aa	Known RBP	3.83	□□□□□ -1.8
APA1	YCL050C	BRR1	Q99177	341 aa	Predicted RBP	3.83	□□□□□ -1.8
APA1	YCL050C	HEM2	P05373	342 aa		3.82	□□□□□ -1.8
APA1	YCL050C	ATR1	P13090	542 aa		3.82	□□□□□ -1.8
APA1	YCL050C	CBS2	P14905	389 aa		3.82	□□□□□ -1.8
APA1	YCL050C	HSC82	P15108	705 aa	Known RBP	3.82	□□□□□ -1.8
APA1	YCL050C	OLE1	P21147	510 aa	Known RBP	3.82	□□□□□ -1.8
APA1	YCL050C	MSN2	P33748	704 aa		3.82	□□□□□ -1.8
APA1	YCL050C	AIM22	P47051	409 aa		3.82	□□□□□ -1.8
APA1	YCL050C	RPC11	Q04307	110 aa	Predicted RBP	3.82	□□□□□ -1.8
APA1	YCL050C	RAV1	P47104	1357 aa		3.81	□□□□□ -1.8
APA1	YCL050C	FOB1	O13329	566 aa		3.81	□□□□□ -1.8
APA1	YCL050C	COR1	P07256	457 aa		3.81	□□□□□ -1.8
APA1	YCL050C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.81	□□□□□ -1.8	not detected
APA1	YCL050C	ELO2	P25358	347 aa		3.81	□□□□□ -1.8
APA1	YCL050C	YCR022C	P25620	114 aa		3.81	□□□□□ -1.8
APA1	YCL050C	SRO77	P38163	1010 aa		3.81	□□□□□ -1.8
APA1	YCL050C	VPS75	P53853	264 aa		3.81	□□□□□ -1.8
APA1	YCL050C	RPT6	Q01939	405 aa	Known RBP	3.81	□□□□□ -1.8
APA1	YCL050C	RBS1	Q05672	457 aa	Known RBP	3.81	□□□□□ -1.8
APA1	YCL050C	RSA1	Q08932	381 aa		3.81	□□□□□ -1.8
APA1	YCL050C	MES1	P00958	751 aa	Known RBP	3.8	□□□□□ -1.8
APA1	YCL050C	PRP2	P20095	876 aa	Predicted RBP	3.8	□□□□□ -1.8
APA1	YCL050C	WBP1	P33767	430 aa	Known RBP	3.8	□□□□□ -1.8
APA1	YCL050C	RSM22	P36056	628 aa		3.8	□□□□□ -1.8
APA1	YCL050C	IDP2	P41939	412 aa		3.8	□□□□□ -1.8
APA1	YCL050C	CAF130	P53280	1122 aa	Predicted RBP	3.8	□□□□□ -1.8
APA1	YCL050C	CFT2	Q12102	859 aa	Predicted RBP	3.8	□□□□□ -1.8
APA1	YCL050C	YLL056C	Q12177	298 aa		3.8	□□□□□ -1.8
APA1	YCL050C	GLK1	P17709	500 aa	Known RBP	3.79	□□□□□ -1.8
APA1	YCL050C	OCA4	P25366	362 aa		3.79	□□□□□ -1.8
APA1	YCL050C	PRD1	P25375	712 aa		3.79	□□□□□ -1.8
APA1	YCL050C	MBB1	P39534	108 aa		3.79	□□□□□ -1.8
APA1	YCL050C	POP1	P41812	875 aa		3.79	□□□□□ -1.8
APA1	YCL050C	GWT1	P47026	490 aa		3.79	□□□□□ -1.8
APA1	YCL050C	PET130	P47065	347 aa		3.79	□□□□□ -1.8
APA1	YCL050C	WSC2	P53832	503 aa		3.79	□□□□□ -1.8
APA1	YCL050C	YDR239C	Q03780	787 aa		3.79	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 104.1 ms