RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeastyeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP13YBL067C RPS5P26783 225 aaKnown RBP6.92□□□□□ -1.3
UBP13YBL067C SPR1P32603 445 aa6.92□□□□□ -1.3
UBP13YBL067C PRK1P40494 810 aa6.92□□□□□ -1.3
UBP13YBL067C BIT61P47041 543 aa6.92□□□□□ -1.3
UBP13YBL067C CAB5Q03941 241 aa6.92□□□□□ -1.3
UBP13YBL067C YML082WQ04533 649 aaKnown RBP6.92□□□□□ -1.3
UBP13YBL067C RRG8Q06109 277 aa6.92□□□□□ -1.3
UBP13YBL067C YDL129WQ07555 291 aa6.92□□□□□ -1.3
UBP13YBL067C COX3P00420 269 aa6.92□□□□□ -1.3
UBP13YBL067C RPL35AP0CX84 120 aaKnown RBP6.92□□□□□ -1.3
UBP13YBL067C RPL35BP0CX85 120 aaKnown RBP6.92□□□□□ -1.3
UBP13YBL067C PYC1P11154 1178 aaKnown RBP6.92□□□□□ -1.3
UBP13YBL067C YIH1P25637 258 aa6.92□□□□□ -1.3
UBP13YBL067C PTC6P25646 442 aa6.92□□□□□ -1.3
UBP13YBL067C RCY1P39531 840 aa6.92□□□□□ -1.3
UBP13YBL067C YFL066CP43538 392 aa6.92□□□□□ -1.3
UBP13YBL067C ZPS1Q12512 249 aa6.92□□□□□ -1.3
UBP13YBL067C DFG16Q99234 619 aa6.92□□□□□ -1.3
UBP13YBL067C EMP70P32802 667 aa6.91□□□□□ -1.3
UBP13YBL067C CYM1P32898 989 aa6.91□□□□□ -1.3
UBP13YBL067C ERG7P38604 731 aa6.91□□□□□ -1.3
UBP13YBL067C SKN7P38889 622 aa6.91□□□□□ -1.3
UBP13YBL067C CEM1P39525 442 aa6.91□□□□□ -1.3
UBP13YBL067C PTC2P39966 464 aaKnown RBP6.91□□□□□ -1.3
UBP13YBL067C SSY5P47002 699 aa6.91□□□□□ -1.3
UBP13YBL067C YJL118WP47022 219 aa6.91□□□□□ -1.3
UBP13YBL067C SDH1Q00711 640 aa6.91□□□□□ -1.3
UBP13YBL067C FMP30Q02883 468 aa6.91□□□□□ -1.3
UBP13YBL067C INA17Q02888 182 aa6.91□□□□□ -1.3
UBP13YBL067C VPS60Q03390 229 aa6.91□□□□□ -1.3
UBP13YBL067C HMO1Q03973 246 aaKnown RBP6.91□□□□□ -1.3
UBP13YBL067C RSM24Q03976 319 aa6.91□□□□□ -1.3
UBP13YBL067C ARP10Q04549 284 aa6.91□□□□□ -1.3
UBP13YBL067C ATG23Q06671 453 aa6.91□□□□□ -1.3
UBP13YBL067C NRT1Q08485 598 aa6.91□□□□□ -1.3
UBP13YBL067C URA4P20051 364 aa6.91□□□□□ -1.3
UBP13YBL067C CIN8P27895 1000 aa6.91□□□□□ -1.3
UBP13YBL067C RTG1P32607 177 aa6.91□□□□□ -1.3
UBP13YBL067C RAD23P32628 398 aaKnown RBP6.91□□□□□ -1.3
UBP13YBL067C HCS1P34243 683 aa6.91□□□□□ -1.3
UBP13YBL067C GDT1P38301 280 aaPredicted RBP6.91□□□□□ -1.3
UBP13YBL067C YJL107CP42947 387 aa6.91□□□□□ -1.3
UBP13YBL067C LOH1P47055 219 aa6.91□□□□□ -1.3
UBP13YBL067C NOP13P53883 403 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
UBP13YBL067C BOP3P53958 396 aa6.91□□□□□ -1.3
UBP13YBL067C EKI1Q03764 534 aa6.91□□□□□ -1.3
UBP13YBL067C MYO5Q04439 1219 aaKnown RBP6.91□□□□□ -1.3
UBP13YBL067C RGC1Q06108 1083 aaKnown RBP6.91□□□□□ -1.3
UBP13YBL067C NDL1Q06568 189 aa6.91□□□□□ -1.3
UBP13YBL067C YOR389WQ08912 624 aa6.91□□□□□ -1.3
UBP13YBL067C MDM20Q12387 796 aaKnown RBP6.91□□□□□ -1.3
UBP13YBL067C TDH2P00358 332 aaKnown RBP6.9□□□□□ -1.3
UBP13YBL067C TDH3P00359 332 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
UBP13YBL067C TRP3P00937 484 aa6.9□□□□□ -1.3
UBP13YBL067C YUR1P26725 428 aa6.9□□□□□ -1.3
UBP13YBL067C YSC84P32793 468 aa6.9□□□□□ -1.3
UBP13YBL067C ASC1P38011 319 aaKnown RBP6.9□□□□□ -1.3
UBP13YBL067C KAP104P38217 918 aaKnown RBP6.9□□□□□ -1.3
UBP13YBL067C PET100P38958 111 aa6.9□□□□□ -1.3
UBP13YBL067C VHS2P40463 436 aa6.9□□□□□ -1.3
UBP13YBL067C RIM13Q03792 727 aa6.9□□□□□ -1.3
UBP13YBL067C RRP17Q04031 235 aaPredicted RBP6.9□□□□□ -1.3
UBP13YBL067C COX20Q04935 205 aa6.9□□□□□ -1.3
UBP13YBL067C MET32Q12041 191 aa6.9□□□□□ -1.3
UBP13YBL067C MSL5Q12186 476 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
UBP13YBL067C SLP1Q12232 587 aa6.9□□□□□ -1.3
UBP13YBL067C TEF1P02994 458 aaKnown RBP6.89□□□□□ -1.31
UBP13YBL067C ARG4P04076 463 aaPredicted RBP6.89□□□□□ -1.31
UBP13YBL067C ILV2P07342 687 aaKnown RBP6.89□□□□□ -1.31
UBP13YBL067C MET16P18408 261 aaPredicted RBP6.89□□□□□ -1.31
UBP13YBL067C SPE2P21182 396 aa6.89□□□□□ -1.31
UBP13YBL067C DSN1P40568 576 aa6.89□□□□□ -1.31
UBP13YBL067C BRO1P48582 844 aa6.89□□□□□ -1.31
UBP13YBL067C EFM6P53970 246 aa6.89□□□□□ -1.31
UBP13YBL067C PAA1Q12447 191 aaKnown RBP6.89□□□□□ -1.31
UBP13YBL067C RAD9P14737 1309 aa6.89□□□□□ -1.31
UBP13YBL067C PDA1P16387 420 aaKnown RBP6.89□□□□□ -1.31
UBP13YBL067C PEX3P28795 441 aa6.89□□□□□ -1.31
UBP13YBL067C CHK1P38147 527 aa6.89□□□□□ -1.31
UBP13YBL067C SAF1P38352 637 aa6.89□□□□□ -1.31
UBP13YBL067C RTT107P38850 1070 aa6.89□□□□□ -1.31
UBP13YBL067C YIL108WP40483 696 aaKnown RBP6.89□□□□□ -1.31
UBP13YBL067C SAD1P43589 448 aa6.89□□□□□ -1.31
UBP13YBL067C GLG2P47011 380 aa6.89□□□□□ -1.31
UBP13YBL067C CUS2P53830 285 aaPredicted RBP6.89□□□□□ -1.31
UBP13YBL067C SKI8Q02793 397 aaPredicted RBP6.89□□□□□ -1.31
UBP13YBL067C AFT2Q08957 416 aa6.89□□□□□ -1.31
UBP13YBL067C SRO7Q12038 1033 aa6.89□□□□□ -1.31
UBP13YBL067C AEP3Q12089 606 aa6.89□□□□□ -1.31
UBP13YBL067C ARG82P07250 355 aa6.88□□□□□ -1.31
UBP13YBL067C SEC12P11655 471 aa6.88□□□□□ -1.31
UBP13YBL067C YSP3P25036 478 aa6.88□□□□□ -1.31
UBP13YBL067C SRB5P32585 307 aa6.88□□□□□ -1.31
UBP13YBL067C MAE1P36013 669 aaKnown RBP6.88□□□□□ -1.31
UBP13YBL067C PCA1P38360 1216 aa6.88□□□□□ -1.31
UBP13YBL067C SWP82P43554 623 aa6.88□□□□□ -1.31
UBP13YBL067C RAI1P53063 387 aaKnown RBP6.88□□□□□ -1.31
UBP13YBL067C IMO32P53219 342 aa6.88□□□□□ -1.31
UBP13YBL067C CAF130P53280 1122 aaPredicted RBP6.88□□□□□ -1.31
UBP13YBL067C SLI1P53304 468 aa6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms