RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 CDC6Q99741 560 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 CSRNP2Q9H175 543 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 SEC31BQ9NQW1 1179 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 ANKRD6Q9Y2G4 727 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 A0A1W2PQU0 124 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 BICDL2A1A5D9 508 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 ATE1O95260 518 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 HOXB1P14653 301 aaPredicted RBP8.79□□□□□ -1
NECAP1-220ENST00000639841 NEK4P51957 841 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 DHX9Q08211 1270 aaKnown RBP8.79□□□□□ -1
NECAP1-220ENST00000639841 NCAPHQ15003 741 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 ATP13A4Q4VNC1 1196 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 ARHGEF25Q86VW2 580 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 FAM186BQ8IYM0 893 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 KLHL6Q8WZ60 621 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 RNF166Q96A37 237 aaPredicted RBP8.79□□□□□ -1
NECAP1-220ENST00000639841 PGBD4Q96DM1 585 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 FUBP3Q96I24 572 aaKnown RBP eCLIP8.79□□□□□ -1
NECAP1-220ENST00000639841 LRGUKQ96M69 825 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 TM9SF2Q99805 663 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 CENPOQ9BU64 300 aa8.79□□□□□ -1
NECAP1-220ENST00000639841 SAP30BPQ9UHR5 308 aaKnown RBP8.79□□□□□ -1
NECAP1-220ENST00000639841 DIS3Q9Y2L1 958 aaKnown RBP8.79□□□□□ -1
NECAP1-220ENST00000639841 ERC2O15083 957 aa8.78□□□□□ -1
NECAP1-220ENST00000639841 EIF5P55010 431 aaKnown RBP8.78□□□□□ -1
NECAP1-220ENST00000639841 SLC27A3Q5K4L6 730 aa8.78□□□□□ -1
NECAP1-220ENST00000639841 HEATR6Q6AI08 1181 aaKnown RBP8.78□□□□□ -1
NECAP1-220ENST00000639841 MON2Q7Z3U7 1717 aa8.78□□□□□ -1
NECAP1-220ENST00000639841 SLC7A14Q8TBB6 771 aa8.78□□□□□ -1
NECAP1-220ENST00000639841 NIFKQ9BYG3 293 aaKnown RBP8.78□□□□□ -1
NECAP1-220ENST00000639841 IFT22Q9H7X7 185 aa8.78□□□□□ -1
NECAP1-220ENST00000639841 NFAT5O94916 1531 aa8.78□□□□□ -1
NECAP1-220ENST00000639841 A0A1W2PRQ8 180 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 GRIN3BO60391 1043 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 ACRP10323 421 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 SLC5A1P13866 664 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 GRIA4P48058 902 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 USP14P54578 494 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 CLN3Q13286 438 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 GTF2H3Q13889 308 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 PPP1R26Q5T8A7 1209 aaPredicted RBP8.77□□□□□ -1
NECAP1-220ENST00000639841 C1orf122Q6ZSJ8 110 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 OTOP3Q7RTS5 596 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 FGD2Q7Z6J4 655 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 ANKRD23Q86SG2 305 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 CCNJLQ8IV13 435 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 ZSCAN1Q8NBB4 408 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 PMEPA1Q969W9 287 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 TNIP3Q96KP6 325 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 TTC14Q96N46 770 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 CNTNAP3BQ96NU0 1288 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 SYT17Q9BSW7 474 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 CNTNAP3Q9BZ76 1288 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 SLC13A1Q9BZW2 595 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 EFCC1Q9HA90 598 aa8.77□□□□□ -1
NECAP1-220ENST00000639841 MEIS3P2A8K0S8 358 aa8.77□□□□□ -1.01
NECAP1-220ENST00000639841 ORC4O43929 436 aa8.77□□□□□ -1.01
NECAP1-220ENST00000639841 MYBL2P10244 700 aa8.77□□□□□ -1.01
NECAP1-220ENST00000639841 EDN3P14138 238 aa8.77□□□□□ -1.01
NECAP1-220ENST00000639841 CYP2C19P33261 490 aa8.77□□□□□ -1.01
NECAP1-220ENST00000639841 RXRGP48443 463 aa8.77□□□□□ -1.01
NECAP1-220ENST00000639841 C1QTNF8P60827 252 aa8.77□□□□□ -1.01
NECAP1-220ENST00000639841 ADCY1Q08828 1119 aa8.77□□□□□ -1.01
NECAP1-220ENST00000639841 FAAP100Q0VG06 881 aa8.77□□□□□ -1.01
NECAP1-220ENST00000639841 TRIM61Q5EBN2 209 aa8.77□□□□□ -1.01
NECAP1-220ENST00000639841 NBPF10Q6P3W6 841 aaKnown RBP8.77□□□□□ -1.01
NECAP1-220ENST00000639841 MARCH10Q8NA82 808 aaPredicted RBP8.77□□□□□ -1.01
NECAP1-220ENST00000639841 USP7Q93009 1102 aa8.77□□□□□ -1.01
NECAP1-220ENST00000639841 RIC8AQ9NPQ8 531 aa8.77□□□□□ -1.01
NECAP1-220ENST00000639841 PHF20L1A8MW92 1017 aa8.76□□□□□ -1.01
NECAP1-220ENST00000639841 M0R2C6 588 aa8.76□□□□□ -1.01
NECAP1-220ENST00000639841 AK2P54819 239 aa8.76□□□□□ -1.01
NECAP1-220ENST00000639841 CNGB1Q14028 1251 aaPredicted RBP8.76□□□□□ -1.01
NECAP1-220ENST00000639841 PCBP2Q15366 365 aaKnown RBP eCLIP8.76□□□□□ -1.01
NECAP1-220ENST00000639841 SKOR2Q2VWA4 1001 aaPredicted RBP8.76□□□□□ -1.01
NECAP1-220ENST00000639841 KIAA1211LQ6NV74 962 aa8.76□□□□□ -1.01
NECAP1-220ENST00000639841 NELL2Q99435 816 aa8.76□□□□□ -1.01
NECAP1-220ENST00000639841 MENTQ9BUN1 341 aa8.76□□□□□ -1.01
NECAP1-220ENST00000639841 OSBPL5Q9H0X9 879 aaPredicted RBP8.76□□□□□ -1.01
NECAP1-220ENST00000639841 PTPN22Q9Y2R2 807 aa8.76□□□□□ -1.01
NECAP1-220ENST00000639841 TTC21BQ7Z4L5 1316 aa8.76□□□□□ -1.01
NECAP1-220ENST00000639841 SENP3-EIF4A1A0A087X0R7 540 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 A6NNZ2 444 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 C9IYK1 514 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 SNUPNO95149 360 aaKnown RBP8.75□□□□□ -1.01
NECAP1-220ENST00000639841 MT-CO1P00395 513 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 ZBED6P86452 979 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 TRIM14Q14142 442 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 ARID5BQ14865 1188 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 ODF1Q14990 250 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 TMEM240Q5SV17 173 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 UNC5AQ6ZN44 842 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 BRAPQ7Z569 592 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 FCHSD1Q86WN1 690 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 MRPL50Q8N5N7 158 aaKnown RBP8.75□□□□□ -1.01
NECAP1-220ENST00000639841 RSAD1Q9HA92 442 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 TSR3Q9UJK0 312 aaKnown RBP8.75□□□□□ -1.01
NECAP1-220ENST00000639841 BTAF1O14981 1849 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 K7ESF4 209 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 XYLBO75191 536 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms