RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 MAN1A1P33908 653 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 TXLNAP40222 546 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 CTCFP49711 727 aaPredicted RBP9.38□□□□□ -0.91
SMN2-214ENST00000626847 MPP3Q13368 585 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 HIF1AQ16665 826 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 CCDC57Q2TAC2 916 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 PKDCCQ504Y2 493 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 ANKRD45Q5TZF3 282 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 CDCA2Q69YH5 1023 aaPredicted RBP9.38□□□□□ -0.91
SMN2-214ENST00000626847 LRRC31Q6UY01 552 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 DZIP1Q86YF9 867 aaKnown RBP9.38□□□□□ -0.91
SMN2-214ENST00000626847 TREML1Q86YW5 311 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 NEK11Q8NG66 645 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 NAF1Q96HR8 494 aaKnown RBP9.38□□□□□ -0.91
SMN2-214ENST00000626847 CEP63Q96MT8 703 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 FAM129BQ96TA1 746 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 DUSP9Q99956 384 aaKnown RBP9.38□□□□□ -0.91
SMN2-214ENST00000626847 UBXN6Q9BZV1 441 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 GRIP2Q9C0E4 1043 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 NIF3L1Q9GZT8 377 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 DHX36Q9H2U1 1008 aaKnown RBP9.38□□□□□ -0.91
SMN2-214ENST00000626847 TSPY26PQ9H489 355 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 ACAD8Q9UKU7 415 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 PXDNLA1KZ92 1463 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 MTA2O94776 668 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 PYGLP06737 847 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 PHKA2P46019 1235 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 RNF144AP50876 292 aaPredicted RBP9.37□□□□□ -0.91
SMN2-214ENST00000626847 CSE1LP55060 971 aaKnown RBP9.37□□□□□ -0.91
SMN2-214ENST00000626847 ROR2Q01974 943 aaKnown RBP9.37□□□□□ -0.91
SMN2-214ENST00000626847 ADCY1Q08828 1119 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 CCDC144BQ3MJ40 725 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 C4orf17Q53FE4 359 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 C9orf131Q5VYM1 1079 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 KRTAP1-3Q8IUG1 177 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 CCDC144CPQ8IYA2 1237 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 KIAA1524Q8TCG1 905 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 HPS1Q92902 700 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 ZBTB10Q96DT7 871 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 CABS1Q96KC9 395 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 ALS2CR12Q96Q35 445 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 GSDMAQ96QA5 445 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 TSGA10Q9BZW7 698 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 TRIM4Q9C037 500 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 BRD8Q9H0E9 1235 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 VCX3BQ9H321 246 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 MRS2Q9HD23 443 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 TBC1D7Q9P0N9 293 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 TMEM63CQ9P1W3 806 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 SEL1LQ9UBV2 794 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 RCAN3Q9UKA8 241 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 GMEB1Q9Y692 573 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 CCDC7Q96M83 1385 aa9.37□□□□□ -0.91
SMN2-214ENST00000626847 RPAP1Q9BWH6 1393 aaPredicted RBP9.37□□□□□ -0.91
SMN2-214ENST00000626847 CCDC85CA6NKD9 419 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.36□□□□□ -0.91
SMN2-214ENST00000626847 GPR182O15218 404 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 CAPN5O15484 640 aaPredicted RBP9.36□□□□□ -0.91
SMN2-214ENST00000626847 VAMP4O75379 141 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 TATP17735 454 aaPredicted RBP9.36□□□□□ -0.91
SMN2-214ENST00000626847 MCM3P25205 808 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 RPL13P26373 211 aaKnown RBP9.36□□□□□ -0.91
SMN2-214ENST00000626847 SCRN1Q12765 414 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 WASHC5Q12768 1159 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 DSC3Q14574 896 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 WTAPQ15007 396 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 CCDC122Q5T0U0 273 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 AKNAD1Q5T1N1 836 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 NUGGCQ68CJ6 796 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 CWF19L1Q69YN2 538 aaKnown RBP9.36□□□□□ -0.91
SMN2-214ENST00000626847 BICDL1Q6ZP65 573 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 ARHGAP27Q6ZUM4 889 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 CEP57Q86XR8 500 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 GABPB2Q8TAK5 448 aaPredicted RBP9.36□□□□□ -0.91
SMN2-214ENST00000626847 GPR152Q8TDT2 470 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 GOLGA1Q92805 767 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 SLC39A3Q9BRY0 314 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 ACBD3Q9H3P7 528 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 NEUROD4Q9HD90 331 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 SEPT10Q9P0V9 454 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 ANKIB1Q9P2G1 1089 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 KLHL42Q9P2K6 505 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 DDX25Q9UHL0 483 aaKnown RBP9.36□□□□□ -0.91
SMN2-214ENST00000626847 TMCC3Q9ULS5 477 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 MAFFQ9ULX9 164 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 ELP1O95163 1332 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 PITPNM2Q9BZ72 1349 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 SLIT3O75094 1523 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 PIK3C2AO00443 1686 aa9.36□□□□□ -0.91
SMN2-214ENST00000626847 CPSF1Q10570 1443 aaKnown RBP9.35□□□□□ -0.91
SMN2-214ENST00000626847 GOLGA6L10A0A0M3HER8 536 aa9.35□□□□□ -0.91
SMN2-214ENST00000626847 LIN7AO14910 233 aaPredicted RBP9.35□□□□□ -0.91
SMN2-214ENST00000626847 PDGFAP04085 211 aa9.35□□□□□ -0.91
SMN2-214ENST00000626847 TGFB3P10600 412 aa9.35□□□□□ -0.91
SMN2-214ENST00000626847 FERP16591 822 aa9.35□□□□□ -0.91
SMN2-214ENST00000626847 EIF4BP23588 611 aaKnown RBP9.35□□□□□ -0.91
SMN2-214ENST00000626847 CCNCP24863 283 aa9.35□□□□□ -0.91
SMN2-214ENST00000626847 RANBP1P43487 201 aa9.35□□□□□ -0.91
SMN2-214ENST00000626847 CLK1P49759 484 aaKnown RBP9.35□□□□□ -0.91
SMN2-214ENST00000626847 LBX1P52954 281 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms