RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ATP2A1O14983 1001 aa10.21□□□□□ -0.78
GGA3-223ENST00000621870 GRIN3BO60391 1043 aa10.21□□□□□ -0.78
GGA3-223ENST00000621870 HMGCS2P54868 508 aa10.21□□□□□ -0.78
GGA3-223ENST00000621870 IFRD2Q12894 506 aaPredicted RBP10.21□□□□□ -0.78
GGA3-223ENST00000621870 ADAM9Q13443 819 aa10.21□□□□□ -0.78
GGA3-223ENST00000621870 PSMB7Q99436 277 aa10.21□□□□□ -0.78
GGA3-223ENST00000621870 DAGLAQ9Y4D2 1042 aa10.21□□□□□ -0.78
GGA3-223ENST00000621870 POLR1AO95602 1720 aaPredicted RBP10.2□□□□□ -0.78
GGA3-223ENST00000621870 MMP1P03956 469 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 AKR1B1P15121 316 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 MCM6Q14566 821 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 LIN9Q5TKA1 542 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 ENAHQ8N8S7 591 aaPredicted RBP10.2□□□□□ -0.78
GGA3-223ENST00000621870 PPP1R14CQ8TAE6 165 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 STAG1Q8WVM7 1258 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 CCDC114Q96M63 670 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 RNF146Q9NTX7 359 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 PRPF3O43395 683 aaKnown RBP10.2□□□□□ -0.78
GGA3-223ENST00000621870 GTPBP6O43824 516 aaPredicted RBP10.2□□□□□ -0.78
GGA3-223ENST00000621870 COBLO75128 1261 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 CHGBP05060 677 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 CTR9Q6PD62 1173 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 RSPH3Q86UC2 560 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 NSUN4Q96CB9 384 aaKnown RBP10.2□□□□□ -0.78
GGA3-223ENST00000621870 TSNARE1Q96NA8 513 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 GGA3Q9NZ52 723 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.2□□□□□ -0.78
GGA3-223ENST00000621870 PIK3C2BO00750 1634 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 A0A087WWV3 80 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 GOLGA6L7A0A1B0GV03 622 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 STAT1P42224 750 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 LRRC41Q15345 812 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 ANGEL2Q5VTE6 544 aaKnown RBP10.2□□□□□ -0.78
GGA3-223ENST00000621870 SAMD7Q7Z3H4 446 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 CLEC10AQ8IUN9 316 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 JAKMIP2Q96AA8 810 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 FAM107BQ9H098 131 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 RASAL2Q9UJF2 1139 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 MTUS1Q9ULD2 1270 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 PAXBP1Q9Y5B6 917 aa10.2□□□□□ -0.78
GGA3-223ENST00000621870 TLDC2A0PJX2 215 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 H0YCG3 227 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 RPN1P04843 607 aaKnown RBP10.19□□□□□ -0.78
GGA3-223ENST00000621870 GYS1P13807 737 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 PRPF38AQ8NAV1 312 aaKnown RBP10.19□□□□□ -0.78
GGA3-223ENST00000621870 BBXQ8WY36 941 aaPredicted RBP10.19□□□□□ -0.78
GGA3-223ENST00000621870 SLF1Q9BQI6 1058 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 MYO1AQ9UBC5 1043 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 PRKAG2Q9UGJ0 569 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 NRKQ7Z2Y5 1582 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 DIP2BQ9P265 1576 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 NEDD4P46934 1319 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 RPAP1Q9BWH6 1393 aaPredicted RBP10.19□□□□□ -0.78
GGA3-223ENST00000621870 KIDINS220Q9ULH0 1771 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 P4HA1P13674 534 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 TMTC3Q6ZXV5 915 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 CYB5R4Q7L1T6 521 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 RETREG2Q8NC44 543 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 IFT81Q8WYA0 676 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 JPH2Q9BR39 696 aaPredicted RBP10.19□□□□□ -0.78
GGA3-223ENST00000621870 XPO4Q9C0E2 1151 aaKnown RBP10.19□□□□□ -0.78
GGA3-223ENST00000621870 TTLL3Q9Y4R7 772 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 PCDHB6Q9Y5E3 794 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 CNTNAP4Q9C0A0 1308 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 NEXMIFQ5QGS0 1516 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 ZBTB5O15062 677 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 TNNC2P02585 160 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 CCND2P30279 289 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 GMPSP49915 693 aaPredicted RBP10.19□□□□□ -0.78
GGA3-223ENST00000621870 TRIM14Q14142 442 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 PPP1R7Q15435 360 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 NACC1Q96RE7 527 aa10.19□□□□□ -0.78
GGA3-223ENST00000621870 IQCGQ9H095 443 aaKnown RBP10.19□□□□□ -0.78
GGA3-223ENST00000621870 HERC5Q9UII4 1024 aaKnown RBP10.19□□□□□ -0.78
GGA3-223ENST00000621870 A0A1W2PRG0 241 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 CSF1RP07333 972 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 ABCB4P21439 1286 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 OSTNP61366 133 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 PPP2R5AQ15172 486 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 GRAMD1CQ8IYS0 662 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 CCDC155Q8N6L0 562 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 NLRP4Q96MN2 994 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 NUP58Q9BVL2 599 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 PLA2G12BQ9BX93 195 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 BHMT2Q9H2M3 363 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 ELP3Q9H9T3 547 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 C1orf112Q9NSG2 853 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 TXNDC16Q9P2K2 825 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 PARP2Q9UGN5 583 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 CEP170BQ9Y4F5 1589 aaPredicted RBP10.18□□□□□ -0.78
GGA3-223ENST00000621870 RHOXF2BP0C7M4 288 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 SRGAP2CP0DJJ0 459 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 SEL1L2Q5TEA6 688 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 TYW1BQ6NUM6 668 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 SMYD4Q8IYR2 804 aaPredicted RBP10.18□□□□□ -0.78
GGA3-223ENST00000621870 RHOXF2Q9BQY4 288 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 CCDC77Q9BR77 488 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 FANCLQ9NW38 375 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 FBXO40Q9UH90 709 aa10.18□□□□□ -0.78
GGA3-223ENST00000621870 INO80Q9ULG1 1556 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms