RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 USP17L11C9JVI0 530 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 USP17L18D6R9N7 530 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 USP17L22D6RA61 530 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 USP17L17D6RBQ6 530 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 USP17L19D6RCP7 530 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 USP17L20D6RJB6 530 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 ERCC5P28715 1186 aaPredicted RBP21.57■■□□□ 1.04
MMP28-204ENST00000615136 USP17L24Q0WX57 530 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 R3HDM1Q15032 1099 aaKnown RBP21.57■■□□□ 1.04
MMP28-204ENST00000615136 USP17L6PQ6QN14 398 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 PPP1R13BQ96KQ4 1090 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 MTMR9Q96QG7 549 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 CCSER1Q9C0I3 900 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 TMX1Q9H3N1 280 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 PSTPIP2Q9H939 334 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 PPP1R3GB7ZBB8 358 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 WNT10BO00744 389 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 GTPBP6O43824 516 aaPredicted RBP21.56■■□□□ 1.04
MMP28-204ENST00000615136 TXLNAP40222 546 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 UBA7P41226 1012 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 GLIPR1L2Q4G1C9 344 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 KLHL10Q6JEL2 608 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 CUL5Q93034 780 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 GMCL1Q96IK5 515 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 SAMSN1Q9NSI8 373 aaKnown RBP21.56■■□□□ 1.04
MMP28-204ENST00000615136 PCDHA1Q9Y5I3 950 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 TMEM232C9JQI7 657 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 COBLO75128 1261 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 POLD1P28340 1107 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 TXKP42681 527 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 STX17P56962 302 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 NCBP1Q09161 790 aaKnown RBP21.56■■□□□ 1.04
MMP28-204ENST00000615136 CIAPIN1Q6FI81 312 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 MTMR14Q8NCE2 650 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 ZNF592Q92610 1267 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 P2RX7Q99572 595 aaKnown RBP21.56■■□□□ 1.04
MMP28-204ENST00000615136 MMTAG2Q9BU76 263 aaKnown RBP21.56■■□□□ 1.04
MMP28-204ENST00000615136 PGAP2Q9UHJ9 254 aa21.56■■□□□ 1.04
MMP28-204ENST00000615136 RRAGBQ5VZM2 374 aa21.55■■□□□ 1.04
MMP28-204ENST00000615136 GJA10Q969M2 543 aa21.55■■□□□ 1.04
MMP28-204ENST00000615136 PRELPP51888 382 aa21.55■■□□□ 1.04
MMP28-204ENST00000615136 CABP7Q86V35 215 aa21.55■■□□□ 1.04
MMP28-204ENST00000615136 RASSF8Q8NHQ8 419 aa21.55■■□□□ 1.04
MMP28-204ENST00000615136 KIF18AQ8NI77 898 aa21.55■■□□□ 1.04
MMP28-204ENST00000615136 PYM1Q9BRP8 204 aaKnown RBP21.55■■□□□ 1.04
MMP28-204ENST00000615136 BMP3P12645 472 aa21.54■■□□□ 1.04
MMP28-204ENST00000615136 PLCG1P19174 1290 aa21.54■■□□□ 1.04
MMP28-204ENST00000615136 TBX2Q13207 712 aaPredicted RBP21.54■■□□□ 1.04
MMP28-204ENST00000615136 CCDC84Q86UT8 332 aaPredicted RBP21.54■■□□□ 1.04
MMP28-204ENST00000615136 IGSF22Q8N9C0 903 aa21.54■■□□□ 1.04
MMP28-204ENST00000615136 ZBTB21Q9ULJ3 1066 aa21.54■■□□□ 1.04
MMP28-204ENST00000615136 SMCHD1A6NHR9 2005 aa21.54■■□□□ 1.04
MMP28-204ENST00000615136 TUBB4AP04350 444 aa21.53■■□□□ 1.04
MMP28-204ENST00000615136 MRPL12P52815 198 aaKnown RBP21.53■■□□□ 1.04
MMP28-204ENST00000615136 CALCRLQ16602 461 aa21.53■■□□□ 1.04
MMP28-204ENST00000615136 UBE2Q2Q8WVN8 375 aa21.53■■□□□ 1.04
MMP28-204ENST00000615136 CCDC94Q9BW85 323 aaPredicted RBP21.53■■□□□ 1.04
MMP28-204ENST00000615136 MYOZ2Q9NPC6 264 aa21.53■■□□□ 1.04
MMP28-204ENST00000615136 BCS1LQ9Y276 419 aa21.53■■□□□ 1.04
MMP28-204ENST00000615136 CCP110O43303 1012 aa21.53■■□□□ 1.04
MMP28-204ENST00000615136 RPN1P04843 607 aaKnown RBP21.53■■□□□ 1.04
MMP28-204ENST00000615136 RASSF7Q02833 373 aa21.53■■□□□ 1.04
MMP28-204ENST00000615136 IKQ13123 557 aaPredicted RBP21.53■■□□□ 1.04
MMP28-204ENST00000615136 USH1GQ495M9 461 aa21.53■■□□□ 1.04
MMP28-204ENST00000615136 SYDE2Q5VT97 1194 aa21.53■■□□□ 1.04
MMP28-204ENST00000615136 ILDR2Q71H61 639 aa21.53■■□□□ 1.04
MMP28-204ENST00000615136 JDP2Q8WYK2 163 aa21.53■■□□□ 1.04
MMP28-204ENST00000615136 AK8Q96MA6 479 aa21.53■■□□□ 1.04
MMP28-204ENST00000615136 UIMC1Q96RL1 719 aa21.53■■□□□ 1.04
MMP28-204ENST00000615136 SGIP1Q9BQI5 828 aa21.53■■□□□ 1.04
MMP28-204ENST00000615136 GLIS2Q9BZE0 524 aaPredicted RBP21.53■■□□□ 1.04
MMP28-204ENST00000615136 MEIS2O14770 477 aa21.52■■□□□ 1.04
MMP28-204ENST00000615136 FKBP1CQ5VVH2 108 aa21.52■■□□□ 1.04
MMP28-204ENST00000615136 FCHSD1Q86WN1 690 aa21.52■■□□□ 1.04
MMP28-204ENST00000615136 KBTBD4Q9NVX7 518 aa21.52■■□□□ 1.04
MMP28-204ENST00000615136 GDAQ9Y2T3 454 aa21.52■■□□□ 1.04
MMP28-204ENST00000615136 POTEMA6NI47 508 aa21.51■■□□□ 1.03
MMP28-204ENST00000615136 ORC2Q13416 577 aaPredicted RBP21.51■■□□□ 1.03
MMP28-204ENST00000615136 TMEM139Q8IV31 216 aa21.51■■□□□ 1.03
MMP28-204ENST00000615136 UPF1Q92900 1129 aaKnown RBP eCLIP21.51■■□□□ 1.03
MMP28-204ENST00000615136 ASTN2O75129 1339 aaPredicted RBP21.51■■□□□ 1.03
MMP28-204ENST00000615136 SYNRGQ9UMZ2 1314 aa21.51■■□□□ 1.03
MMP28-204ENST00000615136 KLRC4O43908 158 aa21.51■■□□□ 1.03
MMP28-204ENST00000615136 FAM83AQ86UY5 434 aa21.51■■□□□ 1.03
MMP28-204ENST00000615136 PDCL2Q8N4E4 241 aa21.51■■□□□ 1.03
MMP28-204ENST00000615136 HAS1Q92839 578 aa21.51■■□□□ 1.03
MMP28-204ENST00000615136 NUDT12Q9BQG2 462 aa21.51■■□□□ 1.03
MMP28-204ENST00000615136 PRR12Q9ULL5 1215 aa21.51■■□□□ 1.03
MMP28-204ENST00000615136 CTNND2Q9UQB3 1225 aa21.51■■□□□ 1.03
MMP28-204ENST00000615136 MAPK8IP1Q9UQF2 711 aa21.51■■□□□ 1.03
MMP28-204ENST00000615136 TMX2Q9Y320 296 aa21.51■■□□□ 1.03
MMP28-204ENST00000615136 OPLAHO14841 1288 aa21.5■■□□□ 1.03
MMP28-204ENST00000615136 ZYXQ15942 572 aaKnown RBP21.5■■□□□ 1.03
MMP28-204ENST00000615136 BTNL9Q6UXG8 535 aa21.5■■□□□ 1.03
MMP28-204ENST00000615136 AMNQ9BXJ7 453 aa21.5■■□□□ 1.03
MMP28-204ENST00000615136 CDK11BP21127 795 aaKnown RBP21.5■■□□□ 1.03
MMP28-204ENST00000615136 FAM83BQ5T0W9 1011 aa21.5■■□□□ 1.03
MMP28-204ENST00000615136 SPECC1LQ69YQ0 1117 aa21.5■■□□□ 1.03
MMP28-204ENST00000615136 PPP4R3AQ6IN85 833 aa21.5■■□□□ 1.03
MMP28-204ENST00000615136 DDX25Q9UHL0 483 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms