RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 MYH6P13533 1939 aa22.72■■□□□ 1.23
SSBP3-216ENST00000610401 POTEMA6NI47 508 aa22.72■■□□□ 1.23
SSBP3-216ENST00000610401 TTC31Q49AM3 519 aaPredicted RBP22.72■■□□□ 1.23
SSBP3-216ENST00000610401 SH3RF3Q8TEJ3 882 aaPredicted RBP22.72■■□□□ 1.23
SSBP3-216ENST00000610401 RUFY1Q96T51 708 aa22.72■■□□□ 1.23
SSBP3-216ENST00000610401 MED4Q9NPJ6 270 aa22.72■■□□□ 1.23
SSBP3-216ENST00000610401 ARHGAP20Q9P2F6 1191 aa22.72■■□□□ 1.23
SSBP3-216ENST00000610401 ANAPC4Q9UJX5 808 aa22.72■■□□□ 1.23
SSBP3-216ENST00000610401 GNGT1P63211 74 aa22.71■■□□□ 1.23
SSBP3-216ENST00000610401 PDCLQ13371 301 aa22.71■■□□□ 1.23
SSBP3-216ENST00000610401 WDR93Q6P2C0 686 aa22.71■■□□□ 1.23
SSBP3-216ENST00000610401 NELFCDQ8IXH7 590 aa22.71■■□□□ 1.23
SSBP3-216ENST00000610401 ZNF444Q8N0Y2 327 aaPredicted RBP22.71■■□□□ 1.23
SSBP3-216ENST00000610401 SLIT2O94813 1529 aa22.71■■□□□ 1.23
SSBP3-216ENST00000610401 LRRC53A6NM62 1247 aa22.71■■□□□ 1.23
SSBP3-216ENST00000610401 SRGNP10124 158 aa22.71■■□□□ 1.23
SSBP3-216ENST00000610401 HIBADHP31937 336 aaKnown RBP22.71■■□□□ 1.23
SSBP3-216ENST00000610401 POTEDQ86YR6 584 aa22.71■■□□□ 1.23
SSBP3-216ENST00000610401 TSEN2Q8NCE0 465 aaKnown RBP22.71■■□□□ 1.23
SSBP3-216ENST00000610401 MYH10P35580 1976 aa22.71■■□□□ 1.23
SSBP3-216ENST00000610401 PDS5AQ29RF7 1337 aaKnown RBP22.71■■□□□ 1.23
SSBP3-216ENST00000610401 ZNF335Q9H4Z2 1342 aaPredicted RBP22.71■■□□□ 1.23
SSBP3-216ENST00000610401 CALML3P27482 149 aa22.71■■□□□ 1.23
SSBP3-216ENST00000610401 PPP2R5BQ15173 497 aa22.71■■□□□ 1.23
SSBP3-216ENST00000610401 BRIP1Q9BX63 1249 aa22.71■■□□□ 1.23
SSBP3-216ENST00000610401 TRIM9Q9C026 710 aa22.71■■□□□ 1.23
SSBP3-216ENST00000610401 PCDHA13Q9Y5I0 950 aa22.71■■□□□ 1.23
SSBP3-216ENST00000610401 KLRF2D3W0D1 207 aa22.7■■□□□ 1.22
SSBP3-216ENST00000610401 EEF1GP26641 437 aaKnown RBP22.7■■□□□ 1.22
SSBP3-216ENST00000610401 KIF11P52732 1056 aa22.7■■□□□ 1.22
SSBP3-216ENST00000610401 SRP68Q9UHB9 627 aaKnown RBP22.7■■□□□ 1.22
SSBP3-216ENST00000610401 SMCO2A6NFE2 343 aa22.7■■□□□ 1.22
SSBP3-216ENST00000610401 TUBB2AQ13885 445 aa22.7■■□□□ 1.22
SSBP3-216ENST00000610401 GIMAP8Q8ND71 665 aaPredicted RBP22.7■■□□□ 1.22
SSBP3-216ENST00000610401 TUBB2BQ9BVA1 445 aa22.7■■□□□ 1.22
SSBP3-216ENST00000610401 SEMA6BQ9H3T3 888 aa22.7■■□□□ 1.22
SSBP3-216ENST00000610401 ANKIB1Q9P2G1 1089 aa22.7■■□□□ 1.22
SSBP3-216ENST00000610401 TAF1P21675 1872 aa22.69■■□□□ 1.22
SSBP3-216ENST00000610401 PRPF6O94906 941 aaKnown RBP22.69■■□□□ 1.22
SSBP3-216ENST00000610401 CCDC70Q6NSX1 233 aa22.69■■□□□ 1.22
SSBP3-216ENST00000610401 COA7Q96BR5 231 aa22.69■■□□□ 1.22
SSBP3-216ENST00000610401 CDK5RAP3Q96JB5 506 aa22.69■■□□□ 1.22
SSBP3-216ENST00000610401 TSPYL1Q9H0U9 437 aa22.69■■□□□ 1.22
SSBP3-216ENST00000610401 MARCH6O60337 910 aa22.69■■□□□ 1.22
SSBP3-216ENST00000610401 MAGEA1P43355 309 aa22.69■■□□□ 1.22
SSBP3-216ENST00000610401 ZBED6P86452 979 aa22.69■■□□□ 1.22
SSBP3-216ENST00000610401 CKAP4Q07065 602 aaKnown RBP22.69■■□□□ 1.22
SSBP3-216ENST00000610401 KIAA0895Q8NCT3 520 aa22.69■■□□□ 1.22
SSBP3-216ENST00000610401 SPATA4Q8NEY3 305 aa22.69■■□□□ 1.22
SSBP3-216ENST00000610401 COL4A1P02462 1669 aa22.69■■□□□ 1.22
SSBP3-216ENST00000610401 TACC1O75410 805 aa22.69■■□□□ 1.22
SSBP3-216ENST00000610401 FAM182BQ5T319 152 aa22.69■■□□□ 1.22
SSBP3-216ENST00000610401 PAPD7Q5XG87 772 aaKnown RBP22.69■■□□□ 1.22
SSBP3-216ENST00000610401 TBCKQ8TEA7 893 aa22.69■■□□□ 1.22
SSBP3-216ENST00000610401 RBM12Q9NTZ6 932 aaKnown RBP22.69■■□□□ 1.22
SSBP3-216ENST00000610401 MIIPQ5JXC2 388 aa22.68■■□□□ 1.22
SSBP3-216ENST00000610401 CREG2Q8IUH2 290 aa22.68■■□□□ 1.22
SSBP3-216ENST00000610401 USO1O60763 962 aaKnown RBP22.68■■□□□ 1.22
SSBP3-216ENST00000610401 SLC1A4P43007 532 aa22.68■■□□□ 1.22
SSBP3-216ENST00000610401 THAP9Q9H5L6 903 aa22.68■■□□□ 1.22
SSBP3-216ENST00000610401 MAD2L2Q9UI95 211 aa22.68■■□□□ 1.22
SSBP3-216ENST00000610401 NFU1Q9UMS0 254 aa22.68■■□□□ 1.22
SSBP3-216ENST00000610401 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.68■■□□□ 1.223e-6■■■□□ 18.4
SSBP3-216ENST00000610401 FECHP22830 423 aa22.67■■□□□ 1.22
SSBP3-216ENST00000610401 FBXW10Q5XX13 1052 aa22.67■■□□□ 1.22
SSBP3-216ENST00000610401 KLHL7Q8IXQ5 586 aa22.67■■□□□ 1.22
SSBP3-216ENST00000610401 CCDC47Q96A33 483 aaKnown RBP22.67■■□□□ 1.22
SSBP3-216ENST00000610401 NUDT12Q9BQG2 462 aa22.67■■□□□ 1.22
SSBP3-216ENST00000610401 BACH1O14867 736 aa22.67■■□□□ 1.22
SSBP3-216ENST00000610401 CCNE1P24864 410 aa22.67■■□□□ 1.22
SSBP3-216ENST00000610401 VAV2P52735 878 aa22.67■■□□□ 1.22
SSBP3-216ENST00000610401 CT47A1Q5JQC4 288 aaPredicted RBP22.67■■□□□ 1.22
SSBP3-216ENST00000610401 OSBPL9Q96SU4 736 aa22.67■■□□□ 1.22
SSBP3-216ENST00000610401 LMTK3Q96Q04 1460 aa22.67■■□□□ 1.22
SSBP3-216ENST00000610401 LRP6O75581 1613 aa22.67■■□□□ 1.22
SSBP3-216ENST00000610401 MYH13Q9UKX3 1938 aa22.67■■□□□ 1.22
SSBP3-216ENST00000610401 NID2Q14112 1375 aa22.67■■□□□ 1.22
SSBP3-216ENST00000610401 UTRNP46939 3433 aa22.67■■□□□ 1.22
SSBP3-216ENST00000610401 RHOBTB3O94955 611 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 SLURP2P0DP57 97 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 PIGSQ96S52 555 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 TMEM47Q9BQJ4 181 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 KBTBD4Q9NVX7 518 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 SNX12Q9UMY4 172 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 FAM153BP0C7A2 387 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 HPDP32754 393 aaPredicted RBP22.66■■□□□ 1.22
SSBP3-216ENST00000610401 TRAPPC10P48553 1259 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 IRAK1P51617 712 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 GUCY2DQ02846 1103 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 PDE4CQ08493 712 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 FAM153CQ494X1 144 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 ARL6IP4Q66PJ3 421 aaKnown RBP22.66■■□□□ 1.22
SSBP3-216ENST00000610401 MTMR8Q96EF0 704 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 NDST4Q9H3R1 872 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 FAM153AQ9UHL3 310 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 BCL9O00512 1426 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 PPFIA4O75335 1185 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 OR52Z1P0C646 297 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 RCAN1P53805 252 aa22.66■■□□□ 1.22
SSBP3-216ENST00000610401 CAPS2Q9BXY5 557 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms