RNA–Protein interactions for RNA: ENST00000602260.5

ZNF544-219, Transcript of zinc finger protein 544, humanhuman

TSL 4

Gene ZNF544, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-219ENST00000602260 ADCY6O43306 1168 aa13.46□□□□□ -0.25
ZNF544-219ENST00000602260 CALML3P27482 149 aa13.46□□□□□ -0.25
ZNF544-219ENST00000602260 FPGSQ05932 587 aa13.46□□□□□ -0.25
ZNF544-219ENST00000602260 USH1GQ495M9 461 aa13.46□□□□□ -0.25
ZNF544-219ENST00000602260 RNF207Q6ZRF8 634 aa13.46□□□□□ -0.25
ZNF544-219ENST00000602260 CHST3Q7LGC8 479 aa13.46□□□□□ -0.25
ZNF544-219ENST00000602260 SH3RF1Q7Z6J0 888 aa13.46□□□□□ -0.25
ZNF544-219ENST00000602260 STAG2Q8N3U4 1231 aa13.46□□□□□ -0.25
ZNF544-219ENST00000602260 RGS22Q8NE09 1264 aa13.46□□□□□ -0.25
ZNF544-219ENST00000602260 MORC4Q8TE76 937 aa13.46□□□□□ -0.25
ZNF544-219ENST00000602260 RNPC3Q96LT9 517 aaKnown RBP13.46□□□□□ -0.25
ZNF544-219ENST00000602260 GLT1D1Q96MS3 346 aa13.46□□□□□ -0.25
ZNF544-219ENST00000602260 SENP2Q9HC62 589 aa13.46□□□□□ -0.25
ZNF544-219ENST00000602260 TMEM39AQ9NV64 488 aa13.46□□□□□ -0.25
ZNF544-219ENST00000602260 ADD3Q9UEY8 706 aaKnown RBP13.46□□□□□ -0.25
ZNF544-219ENST00000602260 LRRC37A2A6NM11 1700 aa13.46□□□□□ -0.25
ZNF544-219ENST00000602260 VCANP13611 3396 aa13.46□□□□□ -0.26
ZNF544-219ENST00000602260 PALM3A6NDB9 673 aaPredicted RBP13.45□□□□□ -0.26
ZNF544-219ENST00000602260 KLRF2D3W0D1 207 aa13.45□□□□□ -0.26
ZNF544-219ENST00000602260 DHX16O60231 1041 aaKnown RBP13.45□□□□□ -0.26
ZNF544-219ENST00000602260 ALDH5A1P51649 535 aaPredicted RBP13.45□□□□□ -0.26
ZNF544-219ENST00000602260 GJA9P57773 515 aa13.45□□□□□ -0.26
ZNF544-219ENST00000602260 ANTXR2P58335 489 aa13.45□□□□□ -0.26
ZNF544-219ENST00000602260 RPS6P62753 249 aaKnown RBP13.45□□□□□ -0.26
ZNF544-219ENST00000602260 TNFAIP2Q03169 654 aa13.45□□□□□ -0.26
ZNF544-219ENST00000602260 WTAPQ15007 396 aa13.45□□□□□ -0.26
ZNF544-219ENST00000602260 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
ZNF544-219ENST00000602260 KCNA10Q16322 511 aa13.45□□□□□ -0.26
ZNF544-219ENST00000602260 QRICH1Q2TAL8 776 aa13.45□□□□□ -0.26
ZNF544-219ENST00000602260 TMEM67Q5HYA8 995 aa13.45□□□□□ -0.26
ZNF544-219ENST00000602260 CCSAPQ6IQ19 270 aaPredicted RBP13.45□□□□□ -0.26
ZNF544-219ENST00000602260 SLC30A10Q6XR72 485 aa13.45□□□□□ -0.26
ZNF544-219ENST00000602260 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.45□□□□□ -0.26
ZNF544-219ENST00000602260 MB21D2Q8IYB1 491 aaPredicted RBP13.45□□□□□ -0.26
ZNF544-219ENST00000602260 IGDCC4Q8TDY8 1250 aa13.45□□□□□ -0.26
ZNF544-219ENST00000602260 UPF3AQ9H1J1 476 aaKnown RBP13.45□□□□□ -0.26
ZNF544-219ENST00000602260 PDGFCQ9NRA1 345 aa13.45□□□□□ -0.26
ZNF544-219ENST00000602260 MAD2L2Q9UI95 211 aa13.45□□□□□ -0.26
ZNF544-219ENST00000602260 ABCB11O95342 1321 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 LOC102724159A0A0B4J2E5 919 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.44□□□□□ -0.26
ZNF544-219ENST00000602260 MYADML2A6NDP7 307 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 SLC27A2O14975 620 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 C6orf222P0C671 652 aaPredicted RBP13.44□□□□□ -0.26
ZNF544-219ENST00000602260 NKX3-2P78367 333 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 IRX5P78411 483 aaPredicted RBP13.44□□□□□ -0.26
ZNF544-219ENST00000602260 GRM4Q14833 912 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 NECTIN1Q15223 517 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 PWP2Q15269 919 aaKnown RBP13.44□□□□□ -0.26
ZNF544-219ENST00000602260 GNASQ5JWF2 1037 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 CREB3L3Q68CJ9 461 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 IQSEC1Q6DN90 963 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 TAPT1Q6NXT6 567 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 NOL8Q76FK4 1167 aaKnown RBP13.44□□□□□ -0.26
ZNF544-219ENST00000602260 EEPD1Q7L9B9 569 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 FBXO11Q86XK2 927 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 FAM161BQ96MY7 647 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 CDX2Q99626 313 aaPredicted RBP13.44□□□□□ -0.26
ZNF544-219ENST00000602260 MAF1Q9H063 256 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 SEMA6BQ9H3T3 888 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 VTA1Q9NP79 307 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 ANO2Q9NQ90 1003 aa13.44□□□□□ -0.26
ZNF544-219ENST00000602260 GNEQ9Y223 722 aaKnown RBP13.44□□□□□ -0.26
ZNF544-219ENST00000602260 A0A0U1RQG5 324 aaPredicted RBP13.43□□□□□ -0.26
ZNF544-219ENST00000602260 CTAGE5O15320 804 aa13.43□□□□□ -0.26
ZNF544-219ENST00000602260 SMPD1P17405 629 aa13.43□□□□□ -0.26
ZNF544-219ENST00000602260 ITGB8P26012 769 aa13.43□□□□□ -0.26
ZNF544-219ENST00000602260 FAAP100Q0VG06 881 aa13.43□□□□□ -0.26
ZNF544-219ENST00000602260 TROAPQ12815 778 aa13.43□□□□□ -0.26
ZNF544-219ENST00000602260 CATIPQ7Z7H3 387 aa13.43□□□□□ -0.26
ZNF544-219ENST00000602260 FBXO16Q8IX29 292 aaPredicted RBP13.43□□□□□ -0.26
ZNF544-219ENST00000602260 DNERQ8NFT8 737 aa13.43□□□□□ -0.26
ZNF544-219ENST00000602260 PRUNE2Q8WUY3 3088 aa13.43□□□□□ -0.26
ZNF544-219ENST00000602260 TBC1D5Q92609 795 aa13.43□□□□□ -0.26
ZNF544-219ENST00000602260 MTMR8Q96EF0 704 aa13.43□□□□□ -0.26
ZNF544-219ENST00000602260 SEZ6LQ9BYH1 1024 aa13.43□□□□□ -0.26
ZNF544-219ENST00000602260 TBX21Q9UL17 535 aa13.43□□□□□ -0.26
ZNF544-219ENST00000602260 MRPL11Q9Y3B7 192 aaKnown RBP13.43□□□□□ -0.26
ZNF544-219ENST00000602260 TLR3O15455 904 aaKnown RBP13.42□□□□□ -0.26
ZNF544-219ENST00000602260 DYNC1LI2O43237 492 aaPredicted RBP13.42□□□□□ -0.26
ZNF544-219ENST00000602260 PRC1O43663 620 aa13.42□□□□□ -0.26
ZNF544-219ENST00000602260 CDC45O75419 566 aa13.42□□□□□ -0.26
ZNF544-219ENST00000602260 TIMP1P01033 207 aa13.42□□□□□ -0.26
ZNF544-219ENST00000602260 ASGR1P07306 291 aa13.42□□□□□ -0.26
ZNF544-219ENST00000602260 EDNRBP24530 442 aa13.42□□□□□ -0.26
ZNF544-219ENST00000602260 PPIGQ13427 754 aaKnown RBP eCLIP13.42□□□□□ -0.26
ZNF544-219ENST00000602260 SLC35G1Q2M3R5 365 aa13.42□□□□□ -0.26
ZNF544-219ENST00000602260 CASC1Q6TDU7 716 aa13.42□□□□□ -0.26
ZNF544-219ENST00000602260 MCF2L2Q86YR7 1114 aa13.42□□□□□ -0.26
ZNF544-219ENST00000602260 MAFAQ8NHW3 353 aaPredicted RBP13.42□□□□□ -0.26
ZNF544-219ENST00000602260 SYTL5Q8TDW5 730 aaPredicted RBP13.42□□□□□ -0.26
ZNF544-219ENST00000602260 MTA3Q9BTC8 594 aa13.42□□□□□ -0.26
ZNF544-219ENST00000602260 AMNQ9BXJ7 453 aa13.42□□□□□ -0.26
ZNF544-219ENST00000602260 RIOX1Q9H6W3 641 aa13.42□□□□□ -0.26
ZNF544-219ENST00000602260 GPHNQ9NQX3 736 aaPredicted RBP13.42□□□□□ -0.26
ZNF544-219ENST00000602260 Q9Y3F1 56 aa13.42□□□□□ -0.26
ZNF544-219ENST00000602260 ARVCFO00192 962 aa13.41□□□□□ -0.26
ZNF544-219ENST00000602260 ZBTB5O15062 677 aa13.41□□□□□ -0.26
ZNF544-219ENST00000602260 PPP1R11O60927 126 aaPredicted RBP13.41□□□□□ -0.26
ZNF544-219ENST00000602260 CABYRO75952 493 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms