RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 CNTN2Q02246 1040 aa10.7□□□□□ -0.7
ZNF548-206ENST00000597047 USP17L6PQ6QN14 398 aa10.7□□□□□ -0.7
ZNF548-206ENST00000597047 IL27Q8NEV9 243 aa10.7□□□□□ -0.7
ZNF548-206ENST00000597047 CLEC4DQ8WXI8 215 aa10.7□□□□□ -0.7
ZNF548-206ENST00000597047 WASF1Q92558 559 aa10.7□□□□□ -0.7
ZNF548-206ENST00000597047 SNX21Q969T3 373 aa10.7□□□□□ -0.7
ZNF548-206ENST00000597047 PGBD1Q96JS3 809 aa10.7□□□□□ -0.7
ZNF548-206ENST00000597047 C6orf50Q9HD87 102 aa10.7□□□□□ -0.7
ZNF548-206ENST00000597047 A1CFQ9NQ94 594 aaKnown RBP10.7□□□□□ -0.7
ZNF548-206ENST00000597047 BARHL2Q9NY43 387 aa10.7□□□□□ -0.7
ZNF548-206ENST00000597047 RBM27Q9P2N5 1060 aaKnown RBP10.7□□□□□ -0.7
ZNF548-206ENST00000597047 DOCK3Q8IZD9 2030 aa10.7□□□□□ -0.7
ZNF548-206ENST00000597047 STRNO43815 780 aa10.69□□□□□ -0.7
ZNF548-206ENST00000597047 MYCLP12524 364 aaPredicted RBP10.69□□□□□ -0.7
ZNF548-206ENST00000597047 FDPSP14324 419 aaKnown RBP10.69□□□□□ -0.7
ZNF548-206ENST00000597047 RGS2P41220 211 aa10.69□□□□□ -0.7
ZNF548-206ENST00000597047 MRPL12P52815 198 aaKnown RBP10.69□□□□□ -0.7
ZNF548-206ENST00000597047 MAP2K5Q13163 448 aa10.69□□□□□ -0.7
ZNF548-206ENST00000597047 GNL2Q13823 731 aaKnown RBP10.69□□□□□ -0.7
ZNF548-206ENST00000597047 JAKMIP3Q5VZ66 844 aa10.69□□□□□ -0.7
ZNF548-206ENST00000597047 TYW1BQ6NUM6 668 aa10.69□□□□□ -0.7
ZNF548-206ENST00000597047 OTOP1Q7RTM1 612 aa10.69□□□□□ -0.7
ZNF548-206ENST00000597047 CCDC12Q8WUD4 166 aaPredicted RBP10.69□□□□□ -0.7
ZNF548-206ENST00000597047 ZFP91Q96JP5 570 aaPredicted RBP10.69□□□□□ -0.7
ZNF548-206ENST00000597047 C8orf76Q96K31 380 aa10.69□□□□□ -0.7
ZNF548-206ENST00000597047 TAAR1Q96RJ0 339 aa10.69□□□□□ -0.7
ZNF548-206ENST00000597047 LLPHQ9BRT6 129 aaKnown RBP10.69□□□□□ -0.7
ZNF548-206ENST00000597047 TMEM260Q9NX78 707 aa10.69□□□□□ -0.7
ZNF548-206ENST00000597047 SLC5A4Q9NY91 659 aa10.69□□□□□ -0.7
ZNF548-206ENST00000597047 CYP39A1Q9NYL5 469 aa10.69□□□□□ -0.7
ZNF548-206ENST00000597047 PCDH10Q9P2E7 1040 aa10.69□□□□□ -0.7
ZNF548-206ENST00000597047 SRRDQ9UH36 339 aa10.69□□□□□ -0.7
ZNF548-206ENST00000597047 PFASO15067 1338 aa10.68□□□□□ -0.7
ZNF548-206ENST00000597047 H3BQV1 296 aa10.68□□□□□ -0.7
ZNF548-206ENST00000597047 COBLO75128 1261 aa10.68□□□□□ -0.7
ZNF548-206ENST00000597047 ELNP15502 786 aa10.68□□□□□ -0.7
ZNF548-206ENST00000597047 EIF2AK2P19525 551 aaKnown RBP10.68□□□□□ -0.7
ZNF548-206ENST00000597047 RPS6P62753 249 aaKnown RBP10.68□□□□□ -0.7
ZNF548-206ENST00000597047 HMGN5P82970 282 aaKnown RBP10.68□□□□□ -0.7
ZNF548-206ENST00000597047 CCL14Q16627 93 aa10.68□□□□□ -0.7
ZNF548-206ENST00000597047 ARHGEF16Q5VV41 709 aa10.68□□□□□ -0.7
ZNF548-206ENST00000597047 MCTP1Q6DN14 999 aa10.68□□□□□ -0.7
ZNF548-206ENST00000597047 EEPD1Q7L9B9 569 aa10.68□□□□□ -0.7
ZNF548-206ENST00000597047 CTU1Q7Z7A3 348 aaKnown RBP10.68□□□□□ -0.7
ZNF548-206ENST00000597047 CCDC148Q8NFR7 591 aa10.68□□□□□ -0.7
ZNF548-206ENST00000597047 NPLOC4Q8TAT6 608 aa10.68□□□□□ -0.7
ZNF548-206ENST00000597047 RASGRP4Q8TDF6 673 aa10.68□□□□□ -0.7
ZNF548-206ENST00000597047 PTCH2Q9Y6C5 1203 aa10.68□□□□□ -0.7
ZNF548-206ENST00000597047 DDX49Q9Y6V7 483 aaKnown RBP10.68□□□□□ -0.7
ZNF548-206ENST00000597047 STK36Q9NRP7 1315 aa10.67□□□□□ -0.7
ZNF548-206ENST00000597047 SPDYE3A6NKU9 549 aa10.67□□□□□ -0.7
ZNF548-206ENST00000597047 hCG_1984214I3L0E3 225 aa10.67□□□□□ -0.7
ZNF548-206ENST00000597047 ADAMTS3O15072 1205 aa10.67□□□□□ -0.7
ZNF548-206ENST00000597047 ADCY3O60266 1144 aa10.67□□□□□ -0.7
ZNF548-206ENST00000597047 GRB14Q14449 540 aa10.67□□□□□ -0.7
ZNF548-206ENST00000597047 MORN1Q5T089 497 aa10.67□□□□□ -0.7
ZNF548-206ENST00000597047 FOXD4L5Q5VV16 416 aaPredicted RBP10.67□□□□□ -0.7
ZNF548-206ENST00000597047 LARP1BQ659C4 914 aaKnown RBP10.67□□□□□ -0.7
ZNF548-206ENST00000597047 KRT40Q6A162 431 aa10.67□□□□□ -0.7
ZNF548-206ENST00000597047 ZNF713Q8N859 430 aaPredicted RBP10.67□□□□□ -0.7
ZNF548-206ENST00000597047 SYTL5Q8TDW5 730 aaPredicted RBP10.67□□□□□ -0.7
ZNF548-206ENST00000597047 SH3TC2Q8TF17 1288 aa10.67□□□□□ -0.7
ZNF548-206ENST00000597047 SOCS4Q8WXH5 440 aa10.67□□□□□ -0.7
ZNF548-206ENST00000597047 FOXD4L4Q8WXT5 416 aaPredicted RBP10.67□□□□□ -0.7
ZNF548-206ENST00000597047 RMDN3Q96TC7 470 aa10.67□□□□□ -0.7
ZNF548-206ENST00000597047 GJD2Q9UKL4 321 aa10.67□□□□□ -0.7
ZNF548-206ENST00000597047 KIF3AQ9Y496 699 aa10.67□□□□□ -0.7
ZNF548-206ENST00000597047 PLXNA1Q9UIW2 1896 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 VPS37CA5D8V6 355 aaPredicted RBP10.66□□□□□ -0.7
ZNF548-206ENST00000597047 SOWAHBA6NEL2 793 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 OPLAHO14841 1288 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 ATP2B1P20020 1258 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 CNGA1P29973 690 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 GNA11P29992 359 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 PDE4DQ08499 809 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 CUL4AQ13619 759 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 SAFBQ15424 915 aaKnown RBP eCLIP10.66□□□□□ -0.7
ZNF548-206ENST00000597047 NOM1Q5C9Z4 860 aaKnown RBP10.66□□□□□ -0.7
ZNF548-206ENST00000597047 PRAMEF19Q5SWL8 479 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 PPP1R18Q6NYC8 613 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 BLIDQ8IZY5 108 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 BICD2Q8TD16 824 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 BRMS1Q9HCU9 246 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 RIC8AQ9NPQ8 531 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 COL20A1Q9P218 1284 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 ADD3Q9UEY8 706 aaKnown RBP10.66□□□□□ -0.7
ZNF548-206ENST00000597047 PCDHA6Q9UN73 950 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 PTPN22Q9Y2R2 807 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 PCDHA8Q9Y5H6 950 aa10.66□□□□□ -0.7
ZNF548-206ENST00000597047 MEIS2O14770 477 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 GNRH1P01148 92 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 CYP2C19P33261 490 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 KRT2P35908 639 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 ZNF76P36508 570 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 ALDH5A1P51649 535 aaPredicted RBP10.65□□□□□ -0.7
ZNF548-206ENST00000597047 TRIM32Q13049 653 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 ZNF792Q3KQV3 632 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 MFSD14CQ5VZR4 134 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 ABRAQ8N0Z2 381 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 REXO1Q8N1G1 1221 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms