RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 TBC1D8O95759 1140 aa12.43□□□□□ -0.42
USE1-204ENST00000594399 CFBP00751 764 aa12.43□□□□□ -0.42
USE1-204ENST00000594399 POLR2MP0CAP2 368 aa12.43□□□□□ -0.42
USE1-204ENST00000594399 ZSCAN22P10073 491 aaPredicted RBP12.43□□□□□ -0.42
USE1-204ENST00000594399 GHRHRQ02643 423 aa12.43□□□□□ -0.42
USE1-204ENST00000594399 PKP1Q13835 747 aa12.43□□□□□ -0.42
USE1-204ENST00000594399 UBE2SQ16763 222 aa12.43□□□□□ -0.42
USE1-204ENST00000594399 NOM1Q5C9Z4 860 aaKnown RBP12.43□□□□□ -0.42
USE1-204ENST00000594399 WDR78Q5VTH9 848 aa12.43□□□□□ -0.42
USE1-204ENST00000594399 MCTP1Q6DN14 999 aa12.43□□□□□ -0.42
USE1-204ENST00000594399 CCAR1Q8IX12 1150 aaKnown RBP12.43□□□□□ -0.42
USE1-204ENST00000594399 SAMD3Q8N6K7 520 aa12.43□□□□□ -0.42
USE1-204ENST00000594399 MAF1Q9H063 256 aa12.43□□□□□ -0.42
USE1-204ENST00000594399 PORCNQ9H237 461 aa12.43□□□□□ -0.42
USE1-204ENST00000594399 FOXP1Q9H334 677 aaPredicted RBP12.43□□□□□ -0.42
USE1-204ENST00000594399 MAP3K20Q9NYL2 800 aaKnown RBP12.43□□□□□ -0.42
USE1-204ENST00000594399 CHMP5Q9NZZ3 219 aa12.43□□□□□ -0.42
USE1-204ENST00000594399 PLXNB2O15031 1838 aa12.43□□□□□ -0.42
USE1-204ENST00000594399 PFASO15067 1338 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 ZNF236Q9UL36 1845 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 BTBD18B2RXH4 712 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 BRD1O95696 1058 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 MAPK4P31152 587 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 CLK2P49760 499 aaKnown RBP12.42□□□□□ -0.42
USE1-204ENST00000594399 HSD17B4P51659 736 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 NR5A1Q13285 461 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 AP3B2Q13367 1082 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 MCTP2Q6DN12 878 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 USP17L6PQ6QN14 398 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 NSMFQ6X4W1 530 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 SLC30A10Q6XR72 485 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 RNF207Q6ZRF8 634 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.42□□□□□ -0.42
USE1-204ENST00000594399 RASGRP4Q8TDF6 673 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 OXER1Q8TDS5 423 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 MCOLN1Q9GZU1 580 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 EFCC1Q9HA90 598 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 A1CFQ9NQ94 594 aaKnown RBP12.42□□□□□ -0.42
USE1-204ENST00000594399 SMCHD1A6NHR9 2005 aa12.42□□□□□ -0.42
USE1-204ENST00000594399 CCDC194A0A1B0GVG4 234 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 SPDYE3A6NKU9 549 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 KIF28PB7ZC32 967 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 M0R2N6 131 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 MEIS2O14770 477 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 ADAMTS3O15072 1205 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 F13A1P00488 732 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 U2AF2P26368 475 aaKnown RBP eCLIP12.41□□□□□ -0.42
USE1-204ENST00000594399 HOXA13P31271 388 aaPredicted RBP12.41□□□□□ -0.42
USE1-204ENST00000594399 RPS6P62753 249 aaKnown RBP12.41□□□□□ -0.42
USE1-204ENST00000594399 RESTQ13127 1097 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 KCTD2Q14681 263 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 JAKMIP3Q5VZ66 844 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 KRT25Q7Z3Z0 450 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 CTU1Q7Z7A3 348 aaKnown RBP12.41□□□□□ -0.42
USE1-204ENST00000594399 FERMT3Q86UX7 667 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 NOSTRINQ8IVI9 506 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 ANKRD35Q8N283 1001 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 MMP19Q99542 508 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 ZSCAN16Q9H4T2 348 aaPredicted RBP12.41□□□□□ -0.42
USE1-204ENST00000594399 CYP39A1Q9NYL5 469 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 BIN2Q9UBW5 565 aaPredicted RBP12.41□□□□□ -0.42
USE1-204ENST00000594399 PCDHA6Q9UN73 950 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 PCDHA8Q9Y5H6 950 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 IVNS1ABPQ9Y6Y0 642 aa12.41□□□□□ -0.42
USE1-204ENST00000594399 GPR25O00155 361 aa12.4□□□□□ -0.42
USE1-204ENST00000594399 FCER1AP12319 257 aa12.4□□□□□ -0.42
USE1-204ENST00000594399 BAATQ14032 418 aaPredicted RBP12.4□□□□□ -0.42
USE1-204ENST00000594399 FOXD4L5Q5VV16 416 aaPredicted RBP12.4□□□□□ -0.42
USE1-204ENST00000594399 BRAPQ7Z569 592 aa12.4□□□□□ -0.42
USE1-204ENST00000594399 GPR142Q7Z601 462 aa12.4□□□□□ -0.42
USE1-204ENST00000594399 SYTL5Q8TDW5 730 aaPredicted RBP12.4□□□□□ -0.42
USE1-204ENST00000594399 ZNF296Q8WUU4 475 aaPredicted RBP12.4□□□□□ -0.42
USE1-204ENST00000594399 FOXD4L4Q8WXT5 416 aaPredicted RBP12.4□□□□□ -0.42
USE1-204ENST00000594399 TBC1D5Q92609 795 aa12.4□□□□□ -0.42
USE1-204ENST00000594399 TNFRSF25Q93038 417 aa12.4□□□□□ -0.42
USE1-204ENST00000594399 ANO3Q9BYT9 981 aa12.4□□□□□ -0.42
USE1-204ENST00000594399 R3HDMLQ9H3Y0 253 aa12.4□□□□□ -0.42
USE1-204ENST00000594399 EHMT1Q9H9B1 1298 aa12.4□□□□□ -0.42
USE1-204ENST00000594399 TMEM260Q9NX78 707 aa12.4□□□□□ -0.42
USE1-204ENST00000594399 ZDHHC9Q9Y397 364 aa12.4□□□□□ -0.42
USE1-204ENST00000594399 MYH15Q9Y2K3 1946 aa12.4□□□□□ -0.42
USE1-204ENST00000594399 LCTP09848 1927 aa12.39□□□□□ -0.43
USE1-204ENST00000594399 STRNO43815 780 aa12.39□□□□□ -0.43
USE1-204ENST00000594399 FKTNO75072 461 aa12.39□□□□□ -0.43
USE1-204ENST00000594399 FOSP01100 380 aaPredicted RBP12.39□□□□□ -0.43
USE1-204ENST00000594399 NONOQ15233 471 aaKnown RBP eCLIP12.39□□□□□ -0.43
USE1-204ENST00000594399 PKN2Q16513 984 aaKnown RBP12.39□□□□□ -0.43
USE1-204ENST00000594399 PIK3AP1Q6ZUJ8 805 aa12.39□□□□□ -0.43
USE1-204ENST00000594399 PLEKHH3Q7Z736 793 aa12.39□□□□□ -0.43
USE1-204ENST00000594399 FCHSD1Q86WN1 690 aa12.39□□□□□ -0.43
USE1-204ENST00000594399 ABRAQ8N0Z2 381 aa12.39□□□□□ -0.43
USE1-204ENST00000594399 PGBD1Q96JS3 809 aa12.39□□□□□ -0.43
USE1-204ENST00000594399 COL20A1Q9P218 1284 aa12.39□□□□□ -0.43
USE1-204ENST00000594399 FRMPD4Q14CM0 1322 aa12.38□□□□□ -0.43
USE1-204ENST00000594399 MGAMO43451 1857 aa12.38□□□□□ -0.43
USE1-204ENST00000594399 FAM205CA6NFA0 338 aa12.38□□□□□ -0.43
USE1-204ENST00000594399 CCDC85CA6NKD9 419 aa12.38□□□□□ -0.43
USE1-204ENST00000594399 POTEB2H3BUK9 544 aa12.38□□□□□ -0.43
USE1-204ENST00000594399 PTPREP23469 700 aa12.38□□□□□ -0.43
USE1-204ENST00000594399 FCGRTP55899 365 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms