RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 CUL4BQ13620 913 aa29.36■■■□□ 2.29
RUNDC3A-206ENST00000590941 NBPF9Q3BBW0 867 aa29.36■■■□□ 2.29
RUNDC3A-206ENST00000590941 ANO3Q9BYT9 981 aa29.36■■■□□ 2.29
RUNDC3A-206ENST00000590941 NRBP1Q9UHY1 535 aa29.36■■■□□ 2.29
RUNDC3A-206ENST00000590941 TXKP42681 527 aa29.35■■■□□ 2.29
RUNDC3A-206ENST00000590941 NOLC1Q14978 699 aaKnown RBP eCLIP29.35■■■□□ 2.29
RUNDC3A-206ENST00000590941 NUP88Q99567 741 aaPredicted RBP29.35■■■□□ 2.29
RUNDC3A-206ENST00000590941 MTRQ99707 1265 aa29.35■■■□□ 2.29
RUNDC3A-206ENST00000590941 LRRC27Q9C0I9 530 aa29.35■■■□□ 2.29
RUNDC3A-206ENST00000590941 PRR12Q9ULL5 1215 aa29.35■■■□□ 2.29
RUNDC3A-206ENST00000590941 CYP3A7-CYP3A51PA0A087WV96 503 aa29.34■■■□□ 2.29
RUNDC3A-206ENST00000590941 FZD9O00144 591 aa29.34■■■□□ 2.29
RUNDC3A-206ENST00000590941 CYP3A7P24462 503 aa29.34■■■□□ 2.29
RUNDC3A-206ENST00000590941 CDC25AP30304 524 aa29.34■■■□□ 2.29
RUNDC3A-206ENST00000590941 FMR1Q06787 632 aaKnown RBP eCLIP29.34■■■□□ 2.29
RUNDC3A-206ENST00000590941 LRRC8AQ8IWT6 810 aa29.34■■■□□ 2.29
RUNDC3A-206ENST00000590941 PP2D1A8MPX8 630 aa29.34■■■□□ 2.29
RUNDC3A-206ENST00000590941 SLC37A4O43826 429 aa29.34■■■□□ 2.29
RUNDC3A-206ENST00000590941 PLCG1P19174 1290 aa29.34■■■□□ 2.29
RUNDC3A-206ENST00000590941 CDK11BP21127 795 aaKnown RBP29.34■■■□□ 2.29
RUNDC3A-206ENST00000590941 CCDC144BQ3MJ40 725 aa29.34■■■□□ 2.29
RUNDC3A-206ENST00000590941 CDK5RAP3Q96JB5 506 aa29.34■■■□□ 2.29
RUNDC3A-206ENST00000590941 MBOAT7Q96N66 472 aa29.34■■■□□ 2.29
RUNDC3A-206ENST00000590941 BLZF1Q9H2G9 400 aa29.34■■■□□ 2.29
RUNDC3A-206ENST00000590941 ATP1A3P13637 1013 aa29.33■■■□□ 2.29
RUNDC3A-206ENST00000590941 STIM1Q13586 685 aa29.33■■■□□ 2.29
RUNDC3A-206ENST00000590941 RASA3Q14644 834 aa29.33■■■□□ 2.29
RUNDC3A-206ENST00000590941 KRT79Q5XKE5 535 aa29.33■■■□□ 2.29
RUNDC3A-206ENST00000590941 HOOK2Q96ED9 719 aa29.33■■■□□ 2.29
RUNDC3A-206ENST00000590941 FEM1BQ9UK73 627 aa29.33■■■□□ 2.29
RUNDC3A-206ENST00000590941 SPDYE3A6NKU9 549 aa29.32■■■□□ 2.28
RUNDC3A-206ENST00000590941 PPP1R3GB7ZBB8 358 aa29.32■■■□□ 2.28
RUNDC3A-206ENST00000590941 PIK3CDO00329 1044 aa29.32■■■□□ 2.28
RUNDC3A-206ENST00000590941 MARCH6O60337 910 aa29.32■■■□□ 2.28
RUNDC3A-206ENST00000590941 ECE1P42892 770 aa29.32■■■□□ 2.28
RUNDC3A-206ENST00000590941 FILIP1Q7Z7B0 1213 aa29.32■■■□□ 2.28
RUNDC3A-206ENST00000590941 CTAGE1Q96RT6 745 aa29.32■■■□□ 2.28
RUNDC3A-206ENST00000590941 RWDD2AQ9UIY3 292 aa29.32■■■□□ 2.28
RUNDC3A-206ENST00000590941 STK24Q9Y6E0 443 aa29.32■■■□□ 2.28
RUNDC3A-206ENST00000590941 MEIS2O14770 477 aa29.31■■■□□ 2.28
RUNDC3A-206ENST00000590941 EDIL3O43854 480 aa29.31■■■□□ 2.28
RUNDC3A-206ENST00000590941 SLFN12Q8IYM2 578 aa29.31■■■□□ 2.28
RUNDC3A-206ENST00000590941 STAMQ92783 540 aa29.31■■■□□ 2.28
RUNDC3A-206ENST00000590941 C7orf25Q9BPX7 421 aa29.31■■■□□ 2.28
RUNDC3A-206ENST00000590941 MYH7BA7E2Y1 1941 aa29.31■■■□□ 2.28
RUNDC3A-206ENST00000590941 KDM3AQ9Y4C1 1321 aa29.31■■■□□ 2.28
RUNDC3A-206ENST00000590941 TBX3O15119 743 aa29.31■■■□□ 2.28
RUNDC3A-206ENST00000590941 RHOBTB3O94955 611 aa29.31■■■□□ 2.28
RUNDC3A-206ENST00000590941 CASP1P29466 404 aa29.31■■■□□ 2.28
RUNDC3A-206ENST00000590941 TMC6Q7Z403 805 aa29.31■■■□□ 2.28
RUNDC3A-206ENST00000590941 ACER1Q8TDN7 264 aa29.31■■■□□ 2.28
RUNDC3A-206ENST00000590941 CACTINQ8WUQ7 758 aaKnown RBP29.31■■■□□ 2.28
RUNDC3A-206ENST00000590941 USP17L15C9J2P7 530 aa29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 USP17L13C9JLJ4 530 aa29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 USP17L11C9JVI0 530 aa29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 USP17L18D6R9N7 530 aa29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 USP17L22D6RA61 530 aa29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 USP17L17D6RBQ6 530 aa29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 USP17L19D6RCP7 530 aa29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 USP17L20D6RJB6 530 aa29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 GMPSP49915 693 aaPredicted RBP29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 SPAG1Q07617 926 aa29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 USP17L24Q0WX57 530 aa29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 PAK1Q13153 545 aa29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 USP17L6PQ6QN14 398 aa29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 MICALL2Q8IY33 904 aa29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 RANBP17Q9H2T7 1088 aaKnown RBP29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 ATAD5Q96QE3 1844 aa29.3■■■□□ 2.28
RUNDC3A-206ENST00000590941 FAM83BQ5T0W9 1011 aa29.29■■■□□ 2.28
RUNDC3A-206ENST00000590941 MIGA2Q7L4E1 593 aa29.29■■■□□ 2.28
RUNDC3A-206ENST00000590941 SPICE1Q8N0Z3 855 aa29.29■■■□□ 2.28
RUNDC3A-206ENST00000590941 MMTAG2Q9BU76 263 aaKnown RBP29.29■■■□□ 2.28
RUNDC3A-206ENST00000590941 PYCARDQ9ULZ3 195 aa29.29■■■□□ 2.28
RUNDC3A-206ENST00000590941 CD44P16070 742 aaKnown RBP29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 SREBF1P36956 1147 aa29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 PTGER2P43116 358 aa29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 TPD52L1Q16890 204 aaPredicted RBP29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 SV2BQ7L1I2 683 aa29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 VSTM4Q8IW00 320 aa29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 TRMT44Q8IYL2 757 aaKnown RBP29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 CRYGNQ8WXF5 182 aa29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 LPAR1Q92633 364 aa29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 NT5C3AQ9H0P0 336 aa29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 EHMT1Q9H9B1 1298 aa29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 PCDHA12Q9UN75 941 aa29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 ARHGAP4P98171 946 aa29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 USH1GQ495M9 461 aa29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 ANKRD20A12PQ8NF67 263 aa29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 CNOT7Q9UIV1 285 aaKnown RBP29.28■■■□□ 2.28
RUNDC3A-206ENST00000590941 SFPQP23246 707 aaKnown RBP eCLIP29.27■■■□□ 2.28
RUNDC3A-206ENST00000590941 Q4G0T1 1027 aa29.27■■■□□ 2.28
RUNDC3A-206ENST00000590941 CDKAL1Q5VV42 579 aa29.27■■■□□ 2.28
RUNDC3A-206ENST00000590941 DCAF15Q66K64 600 aa29.27■■■□□ 2.28
RUNDC3A-206ENST00000590941 KLHL10Q6JEL2 608 aa29.27■■■□□ 2.28
RUNDC3A-206ENST00000590941 SNX29Q8TEQ0 813 aa29.27■■■□□ 2.28
RUNDC3A-206ENST00000590941 TEPSINQ96N21 525 aa29.27■■■□□ 2.28
RUNDC3A-206ENST00000590941 TRIM9Q9C026 710 aa29.27■■■□□ 2.28
RUNDC3A-206ENST00000590941 KCNMB3Q9NPA1 279 aa29.27■■■□□ 2.28
RUNDC3A-206ENST00000590941 MRPL11Q9Y3B7 192 aaKnown RBP29.27■■■□□ 2.28
RUNDC3A-206ENST00000590941 ABCB11O95342 1321 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms