RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 FSD1Q9BTV5 496 aa18.03■□□□□ 0.48
ACTN4-211ENST00000589528 TRMT13Q9NUP7 481 aaKnown RBP18.03■□□□□ 0.48
ACTN4-211ENST00000589528 ADD3Q9UEY8 706 aaKnown RBP18.03■□□□□ 0.48
ACTN4-211ENST00000589528 PRR12Q9ULL5 1215 aa18.03■□□□□ 0.48
ACTN4-211ENST00000589528 REV3LO60673 3130 aa18.03■□□□□ 0.48
ACTN4-211ENST00000589528 TNKSO95271 1327 aa18.02■□□□□ 0.48
ACTN4-211ENST00000589528 ERC2O15083 957 aa18.02■□□□□ 0.48
ACTN4-211ENST00000589528 CYP2C9P11712 490 aa18.02■□□□□ 0.48
ACTN4-211ENST00000589528 CPT1AP50416 773 aa18.02■□□□□ 0.48
ACTN4-211ENST00000589528 DUSP28Q4G0W2 176 aa18.02■□□□□ 0.48
ACTN4-211ENST00000589528 FAM47CQ5HY64 1035 aa18.02■□□□□ 0.48
ACTN4-211ENST00000589528 SEC62Q99442 399 aaKnown RBP18.02■□□□□ 0.48
ACTN4-211ENST00000589528 WDR11Q9BZH6 1224 aa18.02■□□□□ 0.48
ACTN4-211ENST00000589528 XIRP2A4UGR9 3374 aa18.02■□□□□ 0.47
ACTN4-211ENST00000589528 RAD50Q92878 1312 aa18.01■□□□□ 0.47
ACTN4-211ENST00000589528 PTPDC1A2A3K4 754 aa18.01■□□□□ 0.47
ACTN4-211ENST00000589528 ICAM1P05362 532 aa18.01■□□□□ 0.47
ACTN4-211ENST00000589528 CA3P07451 260 aa18.01■□□□□ 0.47
ACTN4-211ENST00000589528 TFF2Q03403 129 aa18.01■□□□□ 0.47
ACTN4-211ENST00000589528 TTLL4Q14679 1199 aa18.01■□□□□ 0.47
ACTN4-211ENST00000589528 MIER1Q8N108 512 aa18.01■□□□□ 0.47
ACTN4-211ENST00000589528 OR6J1Q8NGC5 347 aa18.01■□□□□ 0.47
ACTN4-211ENST00000589528 FAM122AQ96E09 287 aa18.01■□□□□ 0.47
ACTN4-211ENST00000589528 NECAB3Q96P71 396 aaPredicted RBP18.01■□□□□ 0.47
ACTN4-211ENST00000589528 C1QTNF1Q9BXJ1 281 aa18.01■□□□□ 0.47
ACTN4-211ENST00000589528 RCAN3Q9UKA8 241 aa18.01■□□□□ 0.47
ACTN4-211ENST00000589528 TRIP12Q14669 1992 aaPredicted RBP18■□□□□ 0.47
ACTN4-211ENST00000589528 RANBP6O60518 1105 aaKnown RBP18■□□□□ 0.47
ACTN4-211ENST00000589528 NMT2O60551 498 aa18■□□□□ 0.47
ACTN4-211ENST00000589528 ALDH5A1P51649 535 aaPredicted RBP18■□□□□ 0.47
ACTN4-211ENST00000589528 CTDSPL2Q05D32 466 aa18■□□□□ 0.47
ACTN4-211ENST00000589528 BAATQ14032 418 aaPredicted RBP18■□□□□ 0.47
ACTN4-211ENST00000589528 TMEM63BQ5T3F8 832 aa18■□□□□ 0.47
ACTN4-211ENST00000589528 RETREG2Q8NC44 543 aa18■□□□□ 0.47
ACTN4-211ENST00000589528 PURBQ96QR8 312 aaKnown RBP18■□□□□ 0.47
ACTN4-211ENST00000589528 MPHOSPH6Q99547 160 aaKnown RBP18■□□□□ 0.47
ACTN4-211ENST00000589528 FTOQ9C0B1 505 aaKnown RBP eCLIP18■□□□□ 0.478e-20■■□□□ 11.6
ACTN4-211ENST00000589528 CERS4Q9HA82 394 aa18■□□□□ 0.47
ACTN4-211ENST00000589528 TOMM22Q9NS69 142 aa18■□□□□ 0.47
ACTN4-211ENST00000589528 TANC1Q9C0D5 1861 aa17.99■□□□□ 0.47
ACTN4-211ENST00000589528 SCN10AQ9Y5Y9 1956 aa17.99■□□□□ 0.47
ACTN4-211ENST00000589528 KIF28PB7ZC32 967 aa17.99■□□□□ 0.47
ACTN4-211ENST00000589528 PLA2G5P39877 138 aa17.99■□□□□ 0.47
ACTN4-211ENST00000589528 KCNQ1P51787 676 aa17.99■□□□□ 0.47
ACTN4-211ENST00000589528 PURAQ00577 322 aaKnown RBP17.99■□□□□ 0.47
ACTN4-211ENST00000589528 RASGRP2Q7LDG7 609 aa17.99■□□□□ 0.47
ACTN4-211ENST00000589528 MORC4Q8TE76 937 aa17.99■□□□□ 0.47
ACTN4-211ENST00000589528 DCAF4Q8WV16 495 aa17.99■□□□□ 0.47
ACTN4-211ENST00000589528 SLC9A7Q96T83 725 aa17.99■□□□□ 0.47
ACTN4-211ENST00000589528 MTG1Q9BT17 334 aaPredicted RBP17.99■□□□□ 0.47
ACTN4-211ENST00000589528 DCTPP1Q9H773 170 aa17.99■□□□□ 0.47
ACTN4-211ENST00000589528 NOD1Q9Y239 953 aa17.99■□□□□ 0.47
ACTN4-211ENST00000589528 TTC41PQ6P2S7 1318 aa17.98■□□□□ 0.47
ACTN4-211ENST00000589528 LOC102724159A0A0B4J2E5 919 aa17.98■□□□□ 0.47
ACTN4-211ENST00000589528 RFXAPO00287 272 aa17.98■□□□□ 0.47
ACTN4-211ENST00000589528 BMP1P13497 986 aa17.98■□□□□ 0.47
ACTN4-211ENST00000589528 RFC2P35250 354 aa17.98■□□□□ 0.47
ACTN4-211ENST00000589528 SLC16A2P36021 539 aa17.98■□□□□ 0.47
ACTN4-211ENST00000589528 PDE4DQ08499 809 aa17.98■□□□□ 0.47
ACTN4-211ENST00000589528 PPP2R5BQ15173 497 aa17.98■□□□□ 0.47
ACTN4-211ENST00000589528 PWP2Q15269 919 aaKnown RBP17.98■□□□□ 0.47
ACTN4-211ENST00000589528 IL17RBQ9NRM6 502 aa17.98■□□□□ 0.47
ACTN4-211ENST00000589528 BDP1A6H8Y1 2624 aa17.97■□□□□ 0.47
ACTN4-211ENST00000589528 NKRFO15226 690 aaKnown RBP eCLIP17.97■□□□□ 0.471e-6■■■■□ 25.7
ACTN4-211ENST00000589528 CALML3P27482 149 aa17.97■□□□□ 0.47
ACTN4-211ENST00000589528 CHMP4BP1P59074 171 aa17.97■□□□□ 0.47
ACTN4-211ENST00000589528 NBPF20Q3BBV1 942 aa17.97■□□□□ 0.47
ACTN4-211ENST00000589528 ZMYM1Q5SVZ6 1142 aa17.97■□□□□ 0.47
ACTN4-211ENST00000589528 C20orf194Q5TEA3 1177 aa17.97■□□□□ 0.47
ACTN4-211ENST00000589528 ARNTL2Q8WYA1 636 aa17.97■□□□□ 0.47
ACTN4-211ENST00000589528 RANBP17Q9H2T7 1088 aaKnown RBP17.97■□□□□ 0.47
ACTN4-211ENST00000589528 COG5Q9UP83 839 aa17.97■□□□□ 0.47
ACTN4-211ENST00000589528 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.97■□□□□ 0.47
ACTN4-211ENST00000589528 MTCH2Q9Y6C9 303 aa17.97■□□□□ 0.47
ACTN4-211ENST00000589528 TRANK1O15050 2925 aa17.97■□□□□ 0.47
ACTN4-211ENST00000589528 TET1Q8NFU7 2136 aa17.96■□□□□ 0.47
ACTN4-211ENST00000589528 B4DLN1 442 aa17.96■□□□□ 0.47
ACTN4-211ENST00000589528 PITPNM1O00562 1244 aa17.96■□□□□ 0.47
ACTN4-211ENST00000589528 NFIBO00712 420 aa17.96■□□□□ 0.47
ACTN4-211ENST00000589528 MRPL12P52815 198 aaKnown RBP17.96■□□□□ 0.47
ACTN4-211ENST00000589528 BFSP2Q13515 415 aa17.96■□□□□ 0.47
ACTN4-211ENST00000589528 SYDE2Q5VT97 1194 aa17.96■□□□□ 0.47
ACTN4-211ENST00000589528 NFRKBQ6P4R8 1299 aa17.96■□□□□ 0.47
ACTN4-211ENST00000589528 PHOSPHO2Q8TCD6 241 aa17.96■□□□□ 0.47
ACTN4-211ENST00000589528 GPCPD1Q9NPB8 672 aa17.96■□□□□ 0.47
ACTN4-211ENST00000589528 INCENPQ9NQS7 918 aa17.96■□□□□ 0.47
ACTN4-211ENST00000589528 FRMPD2Q68DX3 1309 aaPredicted RBP17.96■□□□□ 0.46
ACTN4-211ENST00000589528 KPNA6O60684 536 aa17.95■□□□□ 0.46
ACTN4-211ENST00000589528 KCNJ6P48051 423 aa17.95■□□□□ 0.46
ACTN4-211ENST00000589528 TTBK2Q6IQ55 1244 aa17.95■□□□□ 0.46
ACTN4-211ENST00000589528 SLC30A10Q6XR72 485 aa17.95■□□□□ 0.46
ACTN4-211ENST00000589528 RNF207Q6ZRF8 634 aa17.95■□□□□ 0.46
ACTN4-211ENST00000589528 CCDC155Q8N6L0 562 aa17.95■□□□□ 0.46
ACTN4-211ENST00000589528 SCFD2Q8WU76 684 aa17.95■□□□□ 0.46
ACTN4-211ENST00000589528 VWCEQ96DN2 955 aa17.95■□□□□ 0.46
ACTN4-211ENST00000589528 PNMA2Q9UL42 364 aa17.95■□□□□ 0.46
ACTN4-211ENST00000589528 RBM47A0AV96 593 aaKnown RBP17.94■□□□□ 0.46
ACTN4-211ENST00000589528 IQCF3P0C7M6 154 aa17.94■□□□□ 0.46
ACTN4-211ENST00000589528 POU3F3P20264 500 aaPredicted RBP17.94■□□□□ 0.46
ACTN4-211ENST00000589528 RRP12Q5JTH9 1297 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms