RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 ADGRA2Q96PE1 1338 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 KHNYNO15037 678 aaKnown RBP6.86□□□□□ -1.31
LINC01539-202ENST00000589293 SRGAP3O43295 1099 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 BAG3O95817 575 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 IGHA2P01877 340 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 HMGCRP04035 888 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 CT47B1P0C2W7 299 aaPredicted RBP6.86□□□□□ -1.31
LINC01539-202ENST00000589293 CD33P20138 364 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 CTGFP29279 349 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 RFX5P48382 616 aaPredicted RBP6.86□□□□□ -1.31
LINC01539-202ENST00000589293 CTBSQ01459 385 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 G3BP1Q13283 466 aaKnown RBP eCLIP6.86□□□□□ -1.31
LINC01539-202ENST00000589293 PDE3AQ14432 1141 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 FAM110CQ1W6H9 321 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 GPAT2Q6NUI2 795 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 FIGNL1Q6PIW4 674 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 ATG9AQ7Z3C6 839 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 CRACR2BQ8N4Y2 399 aaPredicted RBP6.86□□□□□ -1.31
LINC01539-202ENST00000589293 OSBPL5Q9H0X9 879 aaPredicted RBP6.86□□□□□ -1.31
LINC01539-202ENST00000589293 LRP2BPQ9P2M1 347 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 ATXN7L1Q9ULK2 861 aaPredicted RBP6.86□□□□□ -1.31
LINC01539-202ENST00000589293 CEP290O15078 2479 aa6.86□□□□□ -1.31
LINC01539-202ENST00000589293 GAKO14976 1311 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 PDS5AQ29RF7 1337 aaKnown RBP6.85□□□□□ -1.31
LINC01539-202ENST00000589293 A0A1B0GUL7 405 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 DDTLA6NHG4 134 aaPredicted RBP6.85□□□□□ -1.31
LINC01539-202ENST00000589293 PHF20L1A8MW92 1017 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 IPO8O15397 1037 aaKnown RBP6.85□□□□□ -1.31
LINC01539-202ENST00000589293 FAM13AO94988 1023 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 ARSDP51689 593 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 TIMM10P62072 90 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 MECOMQ03112 1051 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 SPP2Q13103 211 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 OS9Q13438 667 aaPredicted RBP6.85□□□□□ -1.31
LINC01539-202ENST00000589293 MOGSQ13724 837 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 RASGRF1Q13972 1273 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 HIF1AQ16665 826 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 ATF7IPQ6VMQ6 1270 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 SND1Q7KZF4 910 aaKnown RBP eCLIP6.85□□□□□ -1.31
LINC01539-202ENST00000589293 ZFPM1Q8IX07 1006 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 TEX11Q8IYF3 940 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 RGL4Q8IZJ4 473 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 GPR152Q8TDT2 470 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 PAWRQ96IZ0 340 aaKnown RBP6.85□□□□□ -1.31
LINC01539-202ENST00000589293 SLC30A3Q99726 388 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.85□□□□□ -1.31
LINC01539-202ENST00000589293 DHX36Q9H2U1 1008 aaKnown RBP6.85□□□□□ -1.31
LINC01539-202ENST00000589293 COPRSQ9NQ92 184 aa6.85□□□□□ -1.31
LINC01539-202ENST00000589293 HERC5Q9UII4 1024 aaKnown RBP6.85□□□□□ -1.31
LINC01539-202ENST00000589293 NOB1Q9ULX3 412 aaKnown RBP6.85□□□□□ -1.31
LINC01539-202ENST00000589293 PA2G4Q9UQ80 394 aaKnown RBP6.85□□□□□ -1.31
LINC01539-202ENST00000589293 TRIOBPQ9H2D6 2365 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 RPTORQ8N122 1335 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 GPR75-ASB3A0A0A6YYF3 556 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 A6NHS1 94 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 PATL2C9JE40 543 aaKnown RBP6.84□□□□□ -1.31
LINC01539-202ENST00000589293 DLL1O00548 723 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 GLRX3O76003 335 aaKnown RBP6.84□□□□□ -1.31
LINC01539-202ENST00000589293 PDGFAP04085 211 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 HLA-DOAP06340 250 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 ASNSP08243 561 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 UQCRFS1P1P0C7P4 283 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 FGFR3P22607 806 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 ADORA1P30542 326 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 HMGCS2P54868 508 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 SLFN5Q08AF3 891 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 TFCP2Q12800 502 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 CCDC158Q5M9N0 1113 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 TTC39AQ5SRH9 613 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 C7orf61Q8IZ16 206 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 SPATA5Q8NB90 893 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 SOCS4Q8WXH5 440 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 EDEM1Q92611 657 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 COL25A1Q9BXS0 654 aaPredicted RBP6.84□□□□□ -1.31
LINC01539-202ENST00000589293 NEUROD4Q9HD90 331 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 PI4KBQ9UBF8 816 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 STAP2Q9UGK3 403 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 POLIQ9UNA4 740 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 ZSWIM8A7E2V4 1837 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 DOCK2Q92608 1830 aa6.84□□□□□ -1.31
LINC01539-202ENST00000589293 ZKSCAN1P17029 563 aaPredicted RBP6.83□□□□□ -1.32
LINC01539-202ENST00000589293 CYP2B6P20813 491 aa6.83□□□□□ -1.32
LINC01539-202ENST00000589293 MAPK4P31152 587 aa6.83□□□□□ -1.32
LINC01539-202ENST00000589293 GMPRP36959 345 aa6.83□□□□□ -1.32
LINC01539-202ENST00000589293 CAP2P40123 477 aa6.83□□□□□ -1.32
LINC01539-202ENST00000589293 CCNA1P78396 465 aa6.83□□□□□ -1.32
LINC01539-202ENST00000589293 MAP3K10Q02779 954 aa6.83□□□□□ -1.32
LINC01539-202ENST00000589293 TREML2Q5T2D2 321 aa6.83□□□□□ -1.32
LINC01539-202ENST00000589293 NAA16Q6N069 864 aaPredicted RBP6.83□□□□□ -1.32
LINC01539-202ENST00000589293 RAB44Q7Z6P3 723 aaPredicted RBP6.83□□□□□ -1.32
LINC01539-202ENST00000589293 UBE2Q1Q7Z7E8 422 aa6.83□□□□□ -1.32
LINC01539-202ENST00000589293 CCDC84Q86UT8 332 aaPredicted RBP6.83□□□□□ -1.32
LINC01539-202ENST00000589293 GPRC5AQ8NFJ5 357 aa6.83□□□□□ -1.32
LINC01539-202ENST00000589293 FEZ1Q99689 392 aa6.83□□□□□ -1.32
LINC01539-202ENST00000589293 ASCC2Q9H1I8 757 aaPredicted RBP6.83□□□□□ -1.32
LINC01539-202ENST00000589293 C11orf49Q9H6J7 331 aa6.83□□□□□ -1.32
LINC01539-202ENST00000589293 DDX4Q9NQI0 724 aaKnown RBP6.83□□□□□ -1.32
LINC01539-202ENST00000589293 PAK6Q9NQU5 681 aaPredicted RBP6.83□□□□□ -1.32
LINC01539-202ENST00000589293 PRKAG2Q9UGJ0 569 aa6.83□□□□□ -1.32
LINC01539-202ENST00000589293 ZMYND8Q9ULU4 1186 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms