RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 MFSD10Q14728 455 aa10.98□□□□□ -0.65
SDF2-203ENST00000585749 RIOX2Q8IUF8 465 aa10.98□□□□□ -0.65
SDF2-203ENST00000585749 SPICE1Q8N0Z3 855 aa10.98□□□□□ -0.65
SDF2-203ENST00000585749 MSL3Q8N5Y2 521 aaKnown RBP10.98□□□□□ -0.65
SDF2-203ENST00000585749 PCSK9Q8NBP7 692 aaKnown RBP10.98□□□□□ -0.65
SDF2-203ENST00000585749 PTCD2Q8WV60 388 aaKnown RBP10.98□□□□□ -0.65
SDF2-203ENST00000585749 KANSL2Q9H9L4 492 aa10.98□□□□□ -0.65
SDF2-203ENST00000585749 ZNF287Q9HBT7 754 aa10.98□□□□□ -0.65
SDF2-203ENST00000585749 ARHGEF10LQ9HCE6 1279 aa10.98□□□□□ -0.65
SDF2-203ENST00000585749 ADAMTS5Q9UNA0 930 aa10.98□□□□□ -0.65
SDF2-203ENST00000585749 TMX2Q9Y320 296 aa10.98□□□□□ -0.65
SDF2-203ENST00000585749 PCDHA11Q9Y5I1 949 aa10.98□□□□□ -0.65
SDF2-203ENST00000585749 UMODL1Q5DID0 1318 aa10.98□□□□□ -0.65
SDF2-203ENST00000585749 PLIN4Q96Q06 1357 aa10.98□□□□□ -0.65
SDF2-203ENST00000585749 EPOPA6NHQ4 379 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 TLR3O15455 904 aaKnown RBP10.97□□□□□ -0.65
SDF2-203ENST00000585749 MCMDC2Q4G0Z9 681 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 KRT40Q6A162 431 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 MAMDC4Q6UXC1 1216 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 CLEC10AQ8IUN9 316 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 SIAH1Q8IUQ4 282 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 RILPL2Q969X0 211 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 VTI1AQ96AJ9 217 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 VWCEQ96DN2 955 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 DDX27Q96GQ7 796 aaKnown RBP10.97□□□□□ -0.65
SDF2-203ENST00000585749 FAM227BQ96M60 508 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 UPF3AQ9H1J1 476 aaKnown RBP10.97□□□□□ -0.65
SDF2-203ENST00000585749 HIPK3Q9H422 1215 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 MKNK2Q9HBH9 465 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 CD320Q9NPF0 282 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 ZHX1Q9UKY1 873 aaPredicted RBP10.97□□□□□ -0.65
SDF2-203ENST00000585749 ZNF214Q9UL59 606 aaPredicted RBP10.97□□□□□ -0.65
SDF2-203ENST00000585749 ZMYM6O95789 1325 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 WDFY4Q6ZS81 3184 aa10.97□□□□□ -0.65
SDF2-203ENST00000585749 MCM3APO60318 1980 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 MYH4Q9Y623 1939 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 LAMA4Q16363 1823 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 CCDC171Q6TFL3 1326 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 WDR46O15213 610 aaKnown RBP10.96□□□□□ -0.65
SDF2-203ENST00000585749 CTAGE5O15320 804 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 SLC3A2P08195 630 aaKnown RBP10.96□□□□□ -0.65
SDF2-203ENST00000585749 NUDT7P0C024 238 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 STAT3P40763 770 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 GJA9P57773 515 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 PDE4BQ07343 736 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 PPARAQ07869 468 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 NMIQ13287 307 aaPredicted RBP10.96□□□□□ -0.65
SDF2-203ENST00000585749 ALX1Q15699 326 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 VPS53Q5VIR6 699 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 HLA-CQ95604 372 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.96□□□□□ -0.65
SDF2-203ENST00000585749 VCPKMTQ9H867 229 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 FBXO28Q9NVF7 368 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 SLC4A7Q9Y6M7 1214 aa10.96□□□□□ -0.65
SDF2-203ENST00000585749 COL4A4P53420 1690 aaPredicted RBP10.95□□□□□ -0.66
SDF2-203ENST00000585749 BRWD1Q9NSI6 2320 aa10.95□□□□□ -0.66
SDF2-203ENST00000585749 IGKV6D-41A0A0C4DH26 115 aa10.95□□□□□ -0.66
SDF2-203ENST00000585749 PRR33A8MZF0 331 aa10.95□□□□□ -0.66
SDF2-203ENST00000585749 HIP1O00291 1037 aa10.95□□□□□ -0.66
SDF2-203ENST00000585749 VWA5AO00534 786 aa10.95□□□□□ -0.66
SDF2-203ENST00000585749 CA3P07451 260 aa10.95□□□□□ -0.66
SDF2-203ENST00000585749 EEF2P13639 858 aaKnown RBP10.95□□□□□ -0.66
SDF2-203ENST00000585749 ATP2A2P16615 1042 aaKnown RBP10.95□□□□□ -0.66
SDF2-203ENST00000585749 SDSP20132 328 aa10.95□□□□□ -0.66
SDF2-203ENST00000585749 MFAP1P55081 439 aaKnown RBP10.95□□□□□ -0.66
SDF2-203ENST00000585749 CCL23P55773 120 aa10.95□□□□□ -0.66
SDF2-203ENST00000585749 ZNF589Q86UQ0 364 aaPredicted RBP10.95□□□□□ -0.66
SDF2-203ENST00000585749 SLC43A3Q8NBI5 491 aa10.95□□□□□ -0.66
SDF2-203ENST00000585749 REPS2Q8NFH8 660 aa10.95□□□□□ -0.66
SDF2-203ENST00000585749 NOC4LQ9BVI4 516 aaKnown RBP10.95□□□□□ -0.66
SDF2-203ENST00000585749 WNT8AQ9H1J5 351 aa10.95□□□□□ -0.66
SDF2-203ENST00000585749 CERS4Q9HA82 394 aa10.95□□□□□ -0.66
SDF2-203ENST00000585749 NYAP2Q9P242 653 aa10.95□□□□□ -0.66
SDF2-203ENST00000585749 ANAPC4Q9UJX5 808 aa10.95□□□□□ -0.66
SDF2-203ENST00000585749 DNAJC25-GNG10A0A024R161 153 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 ZBBXA8MT70 800 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 PRDM1O75626 825 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 HSPD1P10809 573 aaKnown RBP10.94□□□□□ -0.66
SDF2-203ENST00000585749 GSPT1P15170 499 aaKnown RBP10.94□□□□□ -0.66
SDF2-203ENST00000585749 COPB2P35606 906 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 NKX3-2P78367 333 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 ACVR2BQ13705 512 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 CCDC144BQ3MJ40 725 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 TMEM67Q5HYA8 995 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 GNASQ5JWF2 1037 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 TTC22Q5TAA0 569 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 ZNF444Q8N0Y2 327 aaPredicted RBP10.94□□□□□ -0.66
SDF2-203ENST00000585749 STK11IPQ8N1F8 1099 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 SPC25Q9HBM1 224 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 GOPCQ9HD26 462 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 DIAPH3Q9NSV4 1193 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.94□□□□□ -0.66
SDF2-203ENST00000585749 PPP1R9AQ9ULJ8 1098 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 SYNPO2Q9UMS6 1093 aa10.94□□□□□ -0.66
SDF2-203ENST00000585749 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.94□□□□□ -0.66
SDF2-203ENST00000585749 ARHGEF15O94989 841 aa10.93□□□□□ -0.66
SDF2-203ENST00000585749 FGAP02671 866 aa10.93□□□□□ -0.66
SDF2-203ENST00000585749 TSPY3P0CV98 308 aa10.93□□□□□ -0.66
SDF2-203ENST00000585749 TSPY8P0CW00 308 aa10.93□□□□□ -0.66
SDF2-203ENST00000585749 BEX3Q00994 111 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms