RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 CPVLQ9H3G5 476 aa15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 VAT1LQ9HCJ6 419 aa15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 GPHNQ9NQX3 736 aaPredicted RBP15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 FAM184BQ9ULE4 1060 aa15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 PCDHA1Q9Y5I3 950 aa15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 MYCP01106 439 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 ZNF865P0CJ78 1059 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 RARBP10826 455 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 CPA1P15085 419 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 METAP2P50579 478 aaKnown RBP eCLIP15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 HSD17B4P51659 736 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 ACVR2BQ13705 512 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 LHX8Q68G74 356 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 PPP1R18Q6NYC8 613 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 UBE2Q1Q7Z7E8 422 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 BRF1Q92994 677 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 TCEANC2Q96MN5 208 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 PIGSQ96S52 555 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 IWS1Q96ST2 819 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 MYL10Q9BUA6 226 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 GLT8D2Q9H1C3 349 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 ALDH8A1Q9H2A2 487 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 LCTP09848 1927 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 LRRC37A2A6NM11 1700 aa15.97■□□□□ 0.15
PRKCSH-202ENST00000585540 SOWAHBA6NEL2 793 aa15.96■□□□□ 0.15
PRKCSH-202ENST00000585540 DNM1LO00429 736 aa15.96■□□□□ 0.15
PRKCSH-202ENST00000585540 SNAI1O95863 264 aaPredicted RBP15.96■□□□□ 0.15
PRKCSH-202ENST00000585540 EDNRBP24530 442 aa15.96■□□□□ 0.15
PRKCSH-202ENST00000585540 NECAB2Q7Z6G3 386 aa15.96■□□□□ 0.15
PRKCSH-202ENST00000585540 CCDC144CPQ8IYA2 1237 aa15.96■□□□□ 0.15
PRKCSH-202ENST00000585540 NSUN6Q8TEA1 469 aaKnown RBP15.96■□□□□ 0.15
PRKCSH-202ENST00000585540 ZNF274Q96GC6 653 aaPredicted RBP15.96■□□□□ 0.15
PRKCSH-202ENST00000585540 SPC25Q9HBM1 224 aa15.96■□□□□ 0.15
PRKCSH-202ENST00000585540 Q9Y3F1 56 aa15.96■□□□□ 0.15
PRKCSH-202ENST00000585540 SMCHD1A6NHR9 2005 aa15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 CNTNAP5Q8WYK1 1306 aa15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 GCOM1H8Y6P7 765 aaPredicted RBP15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 NKRFO15226 690 aaKnown RBP eCLIP15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 DUSP11O75319 330 aaKnown RBP15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 POLR2MP0CAP2 368 aa15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 CALML3P27482 149 aa15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 CNTN2Q02246 1040 aa15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 CPLX2Q6PUV4 134 aaKnown RBP15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 SLC30A10Q6XR72 485 aa15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 RNF180Q86T96 592 aa15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 FAM177A1Q8N128 213 aaPredicted RBP15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 SRBD1Q8N5C6 995 aaKnown RBP15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 TRPV1Q8NER1 839 aa15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 SYTL5Q8TDW5 730 aaPredicted RBP15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 CUL5Q93034 780 aa15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 UPF2Q9HAU5 1272 aaKnown RBP15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 ZHX1Q9UKY1 873 aaPredicted RBP15.95■□□□□ 0.14
PRKCSH-202ENST00000585540 KBTBD13C9JR72 458 aa15.94■□□□□ 0.14
PRKCSH-202ENST00000585540 PIK3CDO00329 1044 aa15.94■□□□□ 0.14
PRKCSH-202ENST00000585540 STAM2O75886 525 aa15.94■□□□□ 0.14
PRKCSH-202ENST00000585540 PLEKHA8P1O95397 391 aa15.94■□□□□ 0.14
PRKCSH-202ENST00000585540 NKX3-2P78367 333 aa15.94■□□□□ 0.14
PRKCSH-202ENST00000585540 PDE4DQ08499 809 aa15.94■□□□□ 0.14
PRKCSH-202ENST00000585540 SLC35G1Q2M3R5 365 aa15.94■□□□□ 0.14
PRKCSH-202ENST00000585540 IQSEC1Q6DN90 963 aa15.94■□□□□ 0.14
PRKCSH-202ENST00000585540 CCDC12Q8WUD4 166 aaPredicted RBP15.94■□□□□ 0.14
PRKCSH-202ENST00000585540 KATNBL1Q9H079 304 aa15.94■□□□□ 0.14
PRKCSH-202ENST00000585540 PDRG1Q9NUG6 133 aa15.94■□□□□ 0.14
PRKCSH-202ENST00000585540 BRPF3Q9ULD4 1205 aa15.94■□□□□ 0.14
PRKCSH-202ENST00000585540 MCM3APO60318 1980 aa15.93■□□□□ 0.14
PRKCSH-202ENST00000585540 PPP1R11O60927 126 aaPredicted RBP15.93■□□□□ 0.14
PRKCSH-202ENST00000585540 CFBP00751 764 aa15.93■□□□□ 0.14
PRKCSH-202ENST00000585540 RXRAP19793 462 aa15.93■□□□□ 0.14
PRKCSH-202ENST00000585540 CST5P28325 142 aaPredicted RBP15.93■□□□□ 0.14
PRKCSH-202ENST00000585540 APOBRQ0VD83 1088 aa15.93■□□□□ 0.14
PRKCSH-202ENST00000585540 MCTP2Q6DN12 878 aa15.93■□□□□ 0.14
PRKCSH-202ENST00000585540 TSEN34Q9BSV6 310 aaKnown RBP15.93■□□□□ 0.14
PRKCSH-202ENST00000585540 RNF26Q9BY78 433 aaPredicted RBP15.93■□□□□ 0.14
PRKCSH-202ENST00000585540 C11orf49Q9H6J7 331 aa15.93■□□□□ 0.14
PRKCSH-202ENST00000585540 XPNPEP3Q9NQH7 507 aa15.93■□□□□ 0.14
PRKCSH-202ENST00000585540 BAZ2BQ9UIF8 2168 aaKnown RBP15.93■□□□□ 0.14
PRKCSH-202ENST00000585540 RBM47A0AV96 593 aaKnown RBP15.92■□□□□ 0.14
PRKCSH-202ENST00000585540 MOXD2PA6NHM9 499 aa15.92■□□□□ 0.14
PRKCSH-202ENST00000585540 AKAP17AQ02040 695 aaKnown RBP15.92■□□□□ 0.14
PRKCSH-202ENST00000585540 ARHGEF16Q5VV41 709 aa15.92■□□□□ 0.14
PRKCSH-202ENST00000585540 PCSK9Q8NBP7 692 aaKnown RBP15.92■□□□□ 0.14
PRKCSH-202ENST00000585540 SCFD2Q8WU76 684 aa15.92■□□□□ 0.14
PRKCSH-202ENST00000585540 RMDN3Q96TC7 470 aa15.92■□□□□ 0.14
PRKCSH-202ENST00000585540 UPF3BQ9BZI7 483 aaKnown RBP15.92■□□□□ 0.14
PRKCSH-202ENST00000585540 UPF3AQ9H1J1 476 aaKnown RBP15.92■□□□□ 0.14
PRKCSH-202ENST00000585540 EHMT1Q9H9B1 1298 aa15.92■□□□□ 0.14
PRKCSH-202ENST00000585540 NAP1L2Q9ULW6 460 aaPredicted RBP15.92■□□□□ 0.14
PRKCSH-202ENST00000585540 ASTN1O14525 1302 aa15.92■□□□□ 0.14
PRKCSH-202ENST00000585540 FRMPD4Q14CM0 1322 aa15.92■□□□□ 0.14
PRKCSH-202ENST00000585540 OPLAHO14841 1288 aa15.91■□□□□ 0.14
PRKCSH-202ENST00000585540 CDKL5O76039 1030 aa15.91■□□□□ 0.14
PRKCSH-202ENST00000585540 COL6A1P12109 1028 aa15.91■□□□□ 0.14
PRKCSH-202ENST00000585540 IFNAR1P17181 557 aa15.91■□□□□ 0.14
PRKCSH-202ENST00000585540 FUT2Q10981 343 aa15.91■□□□□ 0.14
PRKCSH-202ENST00000585540 TOB2Q14106 344 aaPredicted RBP15.91■□□□□ 0.14
PRKCSH-202ENST00000585540 STXBP2Q15833 593 aa15.91■□□□□ 0.14
PRKCSH-202ENST00000585540 CCDC144BQ3MJ40 725 aa15.91■□□□□ 0.14
PRKCSH-202ENST00000585540 PRAMEF19Q5SWL8 479 aa15.91■□□□□ 0.14
PRKCSH-202ENST00000585540 XRRA1Q6P2D8 792 aa15.91■□□□□ 0.14
PRKCSH-202ENST00000585540 KCNV1Q6PIU1 500 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms