RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 KRT23Q9C075 422 aa20.85■□□□□ 0.93
SNX11-212ENST00000583320 UPF3AQ9H1J1 476 aaKnown RBP20.85■□□□□ 0.93
SNX11-212ENST00000583320 LIMCH1Q9UPQ0 1083 aa20.85■□□□□ 0.93
SNX11-212ENST00000583320 PRRC2BQ5JSZ5 2229 aaKnown RBP20.84■□□□□ 0.93
SNX11-212ENST00000583320 USP17L12C9JPN9 530 aa20.84■□□□□ 0.93
SNX11-212ENST00000583320 USP17L21D6R901 530 aa20.84■□□□□ 0.93
SNX11-212ENST00000583320 CD4P01730 458 aa20.84■□□□□ 0.93
SNX11-212ENST00000583320 CPA1P15085 419 aa20.84■□□□□ 0.93
SNX11-212ENST00000583320 MYOGP15173 224 aa20.84■□□□□ 0.93
SNX11-212ENST00000583320 MCM5P33992 734 aa20.84■□□□□ 0.93
SNX11-212ENST00000583320 CDK8P49336 464 aa20.84■□□□□ 0.93
SNX11-212ENST00000583320 SNRNP48Q6IEG0 339 aaKnown RBP20.84■□□□□ 0.93
SNX11-212ENST00000583320 MSL3Q8N5Y2 521 aaKnown RBP20.84■□□□□ 0.93
SNX11-212ENST00000583320 VTI1AQ96AJ9 217 aa20.84■□□□□ 0.93
SNX11-212ENST00000583320 MTA3Q9BTC8 594 aa20.84■□□□□ 0.93
SNX11-212ENST00000583320 AGXT2Q9BYV1 514 aa20.84■□□□□ 0.93
SNX11-212ENST00000583320 SLC28A3Q9HAS3 691 aa20.84■□□□□ 0.93
SNX11-212ENST00000583320 GREB1LQ9C091 1923 aaPredicted RBP20.83■□□□□ 0.93
SNX11-212ENST00000583320 MINDY4BA8MYZ0 360 aa20.83■□□□□ 0.93
SNX11-212ENST00000583320 GJA9P57773 515 aa20.83■□□□□ 0.93
SNX11-212ENST00000583320 ACVR2BQ13705 512 aa20.83■□□□□ 0.93
SNX11-212ENST00000583320 CCDC144BQ3MJ40 725 aa20.83■□□□□ 0.93
SNX11-212ENST00000583320 C12orf60Q5U649 245 aa20.83■□□□□ 0.93
SNX11-212ENST00000583320 OTOP2Q7RTS6 562 aa20.83■□□□□ 0.93
SNX11-212ENST00000583320 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.83■□□□□ 0.93
SNX11-212ENST00000583320 RAD21O60216 631 aa20.82■□□□□ 0.92
SNX11-212ENST00000583320 COPB2P35606 906 aa20.82■□□□□ 0.92
SNX11-212ENST00000583320 SLC4A3P48751 1232 aa20.82■□□□□ 0.92
SNX11-212ENST00000583320 BEX3Q00994 111 aa20.82■□□□□ 0.92
SNX11-212ENST00000583320 CTDSPL2Q05D32 466 aa20.82■□□□□ 0.92
SNX11-212ENST00000583320 PCSK9Q8NBP7 692 aaKnown RBP20.82■□□□□ 0.92
SNX11-212ENST00000583320 VWCEQ96DN2 955 aa20.82■□□□□ 0.92
SNX11-212ENST00000583320 TMX3Q96JJ7 454 aa20.82■□□□□ 0.92
SNX11-212ENST00000583320 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.82■□□□□ 0.92
SNX11-212ENST00000583320 C1QTNF1Q9BXJ1 281 aa20.82■□□□□ 0.92
SNX11-212ENST00000583320 TEX13BQ9BXU2 312 aa20.82■□□□□ 0.92
SNX11-212ENST00000583320 EPHX3Q9H6B9 360 aa20.82■□□□□ 0.92
SNX11-212ENST00000583320 SH2B1Q9NRF2 756 aaPredicted RBP20.82■□□□□ 0.92
SNX11-212ENST00000583320 ORC4O43929 436 aa20.81■□□□□ 0.92
SNX11-212ENST00000583320 FGBP02675 491 aa20.81■□□□□ 0.92
SNX11-212ENST00000583320 PTGS1P23219 599 aa20.81■□□□□ 0.92
SNX11-212ENST00000583320 CUL4AQ13619 759 aa20.81■□□□□ 0.92
SNX11-212ENST00000583320 GNASQ5JWF2 1037 aa20.81■□□□□ 0.92
SNX11-212ENST00000583320 DDX11Q96FC9 970 aa20.81■□□□□ 0.92
SNX11-212ENST00000583320 CCDC17Q96LX7 622 aa20.81■□□□□ 0.92
SNX11-212ENST00000583320 KATNBL1Q9H079 304 aa20.81■□□□□ 0.92
SNX11-212ENST00000583320 ASTN1O14525 1302 aa20.8■□□□□ 0.92
SNX11-212ENST00000583320 TLR3O15455 904 aaKnown RBP20.8■□□□□ 0.92
SNX11-212ENST00000583320 CCL23P55773 120 aa20.8■□□□□ 0.92
SNX11-212ENST00000583320 TOB2Q14106 344 aaPredicted RBP20.8■□□□□ 0.92
SNX11-212ENST00000583320 Q6ZUG5 572 aa20.8■□□□□ 0.92
SNX11-212ENST00000583320 C16orf86Q6ZW13 317 aa20.8■□□□□ 0.92
SNX11-212ENST00000583320 TMEM87BQ96K49 555 aa20.8■□□□□ 0.92
SNX11-212ENST00000583320 SLF1Q9BQI6 1058 aa20.8■□□□□ 0.92
SNX11-212ENST00000583320 LRFN3Q9BTN0 628 aa20.8■□□□□ 0.92
SNX11-212ENST00000583320 WNT8AQ9H1J5 351 aa20.8■□□□□ 0.92
SNX11-212ENST00000583320 HIPK3Q9H422 1215 aa20.8■□□□□ 0.92
SNX11-212ENST00000583320 KANSL2Q9H9L4 492 aa20.8■□□□□ 0.92
SNX11-212ENST00000583320 GOPCQ9HD26 462 aa20.8■□□□□ 0.92
SNX11-212ENST00000583320 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.8■□□□□ 0.92
SNX11-212ENST00000583320 MUC6Q6W4X9 2439 aa20.8■□□□□ 0.92
SNX11-212ENST00000583320 NEDD4P46934 1319 aa20.79■□□□□ 0.92
SNX11-212ENST00000583320 LRRC37A2A6NM11 1700 aa20.79■□□□□ 0.92
SNX11-212ENST00000583320 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.79■□□□□ 0.92
SNX11-212ENST00000583320 RFXAPO00287 272 aa20.79■□□□□ 0.92
SNX11-212ENST00000583320 PRC1O43663 620 aa20.79■□□□□ 0.92
SNX11-212ENST00000583320 PDE4BQ07343 736 aa20.79■□□□□ 0.92
SNX11-212ENST00000583320 COL9A3Q14050 684 aaPredicted RBP20.79■□□□□ 0.92
SNX11-212ENST00000583320 PPP2R2DQ66LE6 453 aa20.79■□□□□ 0.92
SNX11-212ENST00000583320 ZNF467Q7Z7K2 595 aaPredicted RBP20.79■□□□□ 0.92
SNX11-212ENST00000583320 SLC43A3Q8NBI5 491 aa20.79■□□□□ 0.92
SNX11-212ENST00000583320 ESR2Q92731 530 aa20.79■□□□□ 0.92
SNX11-212ENST00000583320 INTS4Q96HW7 963 aaKnown RBP20.79■□□□□ 0.92
SNX11-212ENST00000583320 GRIN2DO15399 1336 aa20.78■□□□□ 0.92
SNX11-212ENST00000583320 B4E1Z4 1266 aa20.78■□□□□ 0.92
SNX11-212ENST00000583320 EVCP57679 992 aa20.78■□□□□ 0.92
SNX11-212ENST00000583320 ANTXR2P58335 489 aa20.78■□□□□ 0.92
SNX11-212ENST00000583320 CXCL17Q6UXB2 119 aa20.78■□□□□ 0.92
SNX11-212ENST00000583320 ARMCX2Q7L311 632 aa20.78■□□□□ 0.92
SNX11-212ENST00000583320 NOC4LQ9BVI4 516 aaKnown RBP20.78■□□□□ 0.92
SNX11-212ENST00000583320 ABHD16BQ9H3Z7 469 aa20.78■□□□□ 0.92
SNX11-212ENST00000583320 ZNF287Q9HBT7 754 aa20.78■□□□□ 0.92
SNX11-212ENST00000583320 EPOPA6NHQ4 379 aa20.77■□□□□ 0.92
SNX11-212ENST00000583320 HSP90AA1P07900 732 aaKnown RBP20.77■□□□□ 0.92
SNX11-212ENST00000583320 NKX3-2P78367 333 aa20.77■□□□□ 0.92
SNX11-212ENST00000583320 FGD1P98174 961 aa20.77■□□□□ 0.92
SNX11-212ENST00000583320 KRT40Q6A162 431 aa20.77■□□□□ 0.92
SNX11-212ENST00000583320 CPXCR1Q8N123 301 aa20.77■□□□□ 0.92
SNX11-212ENST00000583320 KHSRPQ92945 711 aaKnown RBP eCLIP20.77■□□□□ 0.92
SNX11-212ENST00000583320 TCEANC2Q96MN5 208 aa20.77■□□□□ 0.92
SNX11-212ENST00000583320 TRPV6Q9H1D0 765 aa20.77■□□□□ 0.92
SNX11-212ENST00000583320 TSPYL2Q9H2G4 693 aaPredicted RBP20.77■□□□□ 0.92
SNX11-212ENST00000583320 MTIF3Q9H2K0 278 aaKnown RBP20.77■□□□□ 0.92
SNX11-212ENST00000583320 SPC25Q9HBM1 224 aa20.77■□□□□ 0.92
SNX11-212ENST00000583320 NDUFB10O96000 172 aa20.76■□□□□ 0.91
SNX11-212ENST00000583320 SKIV2LQ15477 1246 aaKnown RBP20.76■□□□□ 0.91
SNX11-212ENST00000583320 CYB5R4Q7L1T6 521 aa20.76■□□□□ 0.91
SNX11-212ENST00000583320 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.76■□□□□ 0.91
SNX11-212ENST00000583320 CCDC144CPQ8IYA2 1237 aa20.76■□□□□ 0.91
SNX11-212ENST00000583320 CHMP4CQ96CF2 233 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms