RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 CCSAPQ6IQ19 270 aaPredicted RBP28.95■■■□□ 2.22
CDC42EP4-205ENST00000580315 ADGRF4Q8IZF3 695 aa28.95■■■□□ 2.22
CDC42EP4-205ENST00000580315 FAM133AQ8N9E0 248 aa28.95■■■□□ 2.22
CDC42EP4-205ENST00000580315 NUP133Q8WUM0 1156 aa28.95■■■□□ 2.22
CDC42EP4-205ENST00000580315 PRUNE2Q8WUY3 3088 aa28.94■■■□□ 2.22
CDC42EP4-205ENST00000580315 PRC1O43663 620 aa28.94■■■□□ 2.22
CDC42EP4-205ENST00000580315 DUSP11O75319 330 aaKnown RBP28.94■■■□□ 2.22
CDC42EP4-205ENST00000580315 CNTN2Q02246 1040 aa28.94■■■□□ 2.22
CDC42EP4-205ENST00000580315 CDC37Q16543 378 aaPredicted RBP28.94■■■□□ 2.22
CDC42EP4-205ENST00000580315 CATIPQ7Z7H3 387 aa28.94■■■□□ 2.22
CDC42EP4-205ENST00000580315 CYP39A1Q9NYL5 469 aa28.94■■■□□ 2.22
CDC42EP4-205ENST00000580315 DCDC2CA8MYV0 355 aa28.93■■■□□ 2.22
CDC42EP4-205ENST00000580315 FPGSQ05932 587 aa28.93■■■□□ 2.22
CDC42EP4-205ENST00000580315 MAFAQ8NHW3 353 aaPredicted RBP28.93■■■□□ 2.22
CDC42EP4-205ENST00000580315 IGDCC4Q8TDY8 1250 aa28.93■■■□□ 2.22
CDC42EP4-205ENST00000580315 MYLIPQ8WY64 445 aa28.93■■■□□ 2.22
CDC42EP4-205ENST00000580315 MYADML2A6NDP7 307 aa28.92■■■□□ 2.22
CDC42EP4-205ENST00000580315 ASB14A6NK59 587 aa28.92■■■□□ 2.22
CDC42EP4-205ENST00000580315 KLRF2D3W0D1 207 aa28.92■■■□□ 2.22
CDC42EP4-205ENST00000580315 ACVR2BQ13705 512 aa28.92■■■□□ 2.22
CDC42EP4-205ENST00000580315 TMTC2Q8N394 836 aa28.92■■■□□ 2.22
CDC42EP4-205ENST00000580315 STAG2Q8N3U4 1231 aa28.92■■■□□ 2.22
CDC42EP4-205ENST00000580315 TMEM87BQ96K49 555 aa28.92■■■□□ 2.22
CDC42EP4-205ENST00000580315 FGD4Q96M96 766 aa28.92■■■□□ 2.22
CDC42EP4-205ENST00000580315 VAT1LQ9HCJ6 419 aa28.92■■■□□ 2.22
CDC42EP4-205ENST00000580315 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.92■■■□□ 2.22
CDC42EP4-205ENST00000580315 MAD2L2Q9UI95 211 aa28.92■■■□□ 2.22
CDC42EP4-205ENST00000580315 NFIBO00712 420 aa28.91■■■□□ 2.22
CDC42EP4-205ENST00000580315 GRM4Q14833 912 aa28.91■■■□□ 2.22
CDC42EP4-205ENST00000580315 USH1GQ495M9 461 aa28.91■■■□□ 2.22
CDC42EP4-205ENST00000580315 ARMCX2Q7L311 632 aa28.91■■■□□ 2.22
CDC42EP4-205ENST00000580315 ABHD16BQ9H3Z7 469 aa28.91■■■□□ 2.22
CDC42EP4-205ENST00000580315 JMJD4Q9H9V9 463 aa28.91■■■□□ 2.22
CDC42EP4-205ENST00000580315 SENP2Q9HC62 589 aa28.91■■■□□ 2.22
CDC42EP4-205ENST00000580315 PTPDC1A2A3K4 754 aa28.9■■■□□ 2.22
CDC42EP4-205ENST00000580315 PALM3A6NDB9 673 aaPredicted RBP28.9■■■□□ 2.22
CDC42EP4-205ENST00000580315 ADCY6O43306 1168 aa28.9■■■□□ 2.22
CDC42EP4-205ENST00000580315 CST5P28325 142 aaPredicted RBP28.9■■■□□ 2.22
CDC42EP4-205ENST00000580315 IRX5P78411 483 aaPredicted RBP28.9■■■□□ 2.22
CDC42EP4-205ENST00000580315 CCDC144CPQ8IYA2 1237 aa28.9■■■□□ 2.22
CDC42EP4-205ENST00000580315 ADD3Q9UEY8 706 aaKnown RBP28.9■■■□□ 2.22
CDC42EP4-205ENST00000580315 SOWAHBA6NEL2 793 aa28.89■■■□□ 2.22
CDC42EP4-205ENST00000580315 C6orf222P0C671 652 aaPredicted RBP28.89■■■□□ 2.22
CDC42EP4-205ENST00000580315 TROAPQ12815 778 aa28.89■■■□□ 2.22
CDC42EP4-205ENST00000580315 BAATQ14032 418 aaPredicted RBP28.89■■■□□ 2.22
CDC42EP4-205ENST00000580315 QRICH1Q2TAL8 776 aa28.89■■■□□ 2.22
CDC42EP4-205ENST00000580315 CCDC144BQ3MJ40 725 aa28.89■■■□□ 2.22
CDC42EP4-205ENST00000580315 NFXL1Q6ZNB6 911 aa28.89■■■□□ 2.22
CDC42EP4-205ENST00000580315 RNF207Q6ZRF8 634 aa28.89■■■□□ 2.22
CDC42EP4-205ENST00000580315 CLEC4DQ8WXI8 215 aa28.89■■■□□ 2.22
CDC42EP4-205ENST00000580315 GLT1D1Q96MS3 346 aa28.89■■■□□ 2.22
CDC42EP4-205ENST00000580315 LY9Q9HBG7 655 aa28.89■■■□□ 2.22
CDC42EP4-205ENST00000580315 TBX21Q9UL17 535 aa28.89■■■□□ 2.22
CDC42EP4-205ENST00000580315 ELP1O95163 1332 aa28.89■■■□□ 2.21
CDC42EP4-205ENST00000580315 ABCB11O95342 1321 aa28.89■■■□□ 2.21
CDC42EP4-205ENST00000580315 TMEM265A0A087WTH1 108 aa28.88■■■□□ 2.21
CDC42EP4-205ENST00000580315 CCDC69A6NI79 296 aa28.88■■■□□ 2.21
CDC42EP4-205ENST00000580315 REC8O95072 547 aa28.88■■■□□ 2.21
CDC42EP4-205ENST00000580315 TIMP1P01033 207 aa28.88■■■□□ 2.21
CDC42EP4-205ENST00000580315 KRT32Q14532 448 aa28.88■■■□□ 2.21
CDC42EP4-205ENST00000580315 FBXO11Q86XK2 927 aa28.88■■■□□ 2.21
CDC42EP4-205ENST00000580315 PCSK9Q8NBP7 692 aaKnown RBP28.88■■■□□ 2.21
CDC42EP4-205ENST00000580315 NEK1Q96PY6 1258 aa28.88■■■□□ 2.21
CDC42EP4-205ENST00000580315 SH2B2O14492 632 aaPredicted RBP28.87■■■□□ 2.21
CDC42EP4-205ENST00000580315 DDAH1O94760 285 aa28.87■■■□□ 2.21
CDC42EP4-205ENST00000580315 ASGR1P07306 291 aa28.87■■■□□ 2.21
CDC42EP4-205ENST00000580315 CDK7P50613 346 aa28.87■■■□□ 2.21
CDC42EP4-205ENST00000580315 ZNF654Q8IZM8 581 aa28.87■■■□□ 2.21
CDC42EP4-205ENST00000580315 RGS22Q8NE09 1264 aa28.87■■■□□ 2.21
CDC42EP4-205ENST00000580315 MAP3K14Q99558 947 aa28.87■■■□□ 2.21
CDC42EP4-205ENST00000580315 MAF1Q9H063 256 aa28.87■■■□□ 2.21
CDC42EP4-205ENST00000580315 UPF3AQ9H1J1 476 aaKnown RBP28.87■■■□□ 2.21
CDC42EP4-205ENST00000580315 SPC25Q9HBM1 224 aa28.87■■■□□ 2.21
CDC42EP4-205ENST00000580315 FOSL2P15408 326 aa28.86■■■□□ 2.21
CDC42EP4-205ENST00000580315 CALML3P27482 149 aa28.86■■■□□ 2.21
CDC42EP4-205ENST00000580315 KIF5BP33176 963 aa28.86■■■□□ 2.21
CDC42EP4-205ENST00000580315 LIFRP42702 1097 aa28.86■■■□□ 2.21
CDC42EP4-205ENST00000580315 GJA9P57773 515 aa28.86■■■□□ 2.21
CDC42EP4-205ENST00000580315 TSGA10IPQ3SY00 556 aa28.86■■■□□ 2.21
CDC42EP4-205ENST00000580315 CTCFLQ8NI51 663 aaPredicted RBP28.86■■■□□ 2.21
CDC42EP4-205ENST00000580315 AMNQ9BXJ7 453 aa28.86■■■□□ 2.21
CDC42EP4-205ENST00000580315 MRPL11Q9Y3B7 192 aaKnown RBP28.86■■■□□ 2.21
CDC42EP4-205ENST00000580315 MROH7Q68CQ1 1323 aa28.86■■■□□ 2.21
CDC42EP4-205ENST00000580315 LOC102724159A0A0B4J2E5 919 aa28.85■■■□□ 2.21
CDC42EP4-205ENST00000580315 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.85■■■□□ 2.21
CDC42EP4-205ENST00000580315 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.85■■■□□ 2.21
CDC42EP4-205ENST00000580315 ZBTB5O15062 677 aa28.85■■■□□ 2.21
CDC42EP4-205ENST00000580315 TRAF1Q13077 416 aa28.85■■■□□ 2.21
CDC42EP4-205ENST00000580315 PWP2Q15269 919 aaKnown RBP28.85■■■□□ 2.21
CDC42EP4-205ENST00000580315 GNASQ5JWF2 1037 aa28.85■■■□□ 2.21
CDC42EP4-205ENST00000580315 SLC30A10Q6XR72 485 aa28.85■■■□□ 2.21
CDC42EP4-205ENST00000580315 MCF2L2Q86YR7 1114 aa28.85■■■□□ 2.21
CDC42EP4-205ENST00000580315 VTI1AQ96AJ9 217 aa28.85■■■□□ 2.21
CDC42EP4-205ENST00000580315 MPHOSPH6Q99547 160 aaKnown RBP28.85■■■□□ 2.21
CDC42EP4-205ENST00000580315 KATNBL1Q9H079 304 aa28.85■■■□□ 2.21
CDC42EP4-205ENST00000580315 GPHNQ9NQX3 736 aaPredicted RBP28.85■■■□□ 2.21
CDC42EP4-205ENST00000580315 RPS6P62753 249 aaKnown RBP28.84■■■□□ 2.21
CDC42EP4-205ENST00000580315 MFSD5Q6N075 450 aa28.84■■■□□ 2.21
CDC42EP4-205ENST00000580315 CALM1P0DP23 149 aa28.83■■■□□ 2.21
CDC42EP4-205ENST00000580315 CALM2P0DP24 149 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms