RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 COG6Q9Y2V7 657 aa11.1□□□□□ -0.63
SMARCD2-208ENST00000580054 SLC4A4Q9Y6R1 1079 aa11.1□□□□□ -0.63
SMARCD2-208ENST00000580054 IGKV6D-41A0A0C4DH26 115 aa11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 SNAP25P60880 206 aa11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 TCTN1Q2MV58 587 aa11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 NBPF20Q3BBV1 942 aa11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 HSP90AB4PQ58FF6 505 aa11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 MUM1L1Q5H9M0 696 aa11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 IQSEC1Q6DN90 963 aa11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 KIAA1211Q6ZU35 1233 aa11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 RHPN1Q8TCX5 695 aa11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 PAG1Q9NWQ8 432 aa11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 ARPP21Q9UBL0 812 aaPredicted RBP11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 Q9Y3F1 56 aa11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 USP34Q70CQ2 3546 aa11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 MICAL3Q7RTP6 2002 aa11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 CFAP54Q96N23 3096 aa11.09□□□□□ -0.63
SMARCD2-208ENST00000580054 NLRC5Q86WI3 1866 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 H3BQ06 376 aaPredicted RBP11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 DCXO43602 365 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 BAIAP3O94812 1187 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 ALAS1P13196 640 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 ALADP13716 330 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 KCNJ6P48051 423 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 GPNMBQ14956 572 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 DUSP28Q4G0W2 176 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 HFE2Q6ZVN8 426 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 RASGRP2Q7LDG7 609 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 PANK1Q8TE04 598 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 CEP95Q96GE4 821 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 DDRGK1Q96HY6 314 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 TRERF1Q96PN7 1200 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 PUS7LQ9H0K6 701 aaKnown RBP11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 BOLA2Q9H3K6 86 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 VTA1Q9NP79 307 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 POLR3EQ9NVU0 708 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 CYP39A1Q9NYL5 469 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 LMCD1Q9NZU5 365 aa11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 ISY1Q9ULR0 285 aaKnown RBP11.08□□□□□ -0.64
SMARCD2-208ENST00000580054 LINC01553A4QN01 128 aa11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 GRXCR2A6NFK2 248 aa11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 TMEM232C9JQI7 657 aa11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 PRDM1O75626 825 aa11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 IFIT2P09913 472 aaKnown RBP11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 ERVK-21P61565 698 aa11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 SLFN13Q68D06 897 aa11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 CLASRPQ8N2M8 674 aaKnown RBP11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 RETREG2Q8NC44 543 aa11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 GMCL1P1Q8NEA9 526 aa11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 OR6J1Q8NGC5 347 aa11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 TGS1Q96RS0 853 aaKnown RBP11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 MTG1Q9BT17 334 aaPredicted RBP11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 ZBED2Q9BTP6 218 aa11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 MKNK2Q9HBH9 465 aa11.07□□□□□ -0.64
SMARCD2-208ENST00000580054 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 MINDY4BA8MYZ0 360 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 BMP3P12645 472 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 CPT1AP50416 773 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 STAT2P52630 851 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 ZP2Q05996 745 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 FAM117BQ6P1L5 589 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 NSMFQ6X4W1 530 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 MORC4Q8TE76 937 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 COPS5Q92905 334 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 KIF1BPQ96EK5 621 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 CTAGE1Q96RT6 745 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 C17orf80Q9BSJ5 609 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 WDR11Q9BZH6 1224 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 KCNH6Q9H252 994 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 MTMR4Q9NYA4 1195 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 CACNA1HO95180 2353 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 KMT2EQ8IZD2 1858 aa11.06□□□□□ -0.64
SMARCD2-208ENST00000580054 GJB5O95377 273 aa11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 ALDH5A1P51649 535 aaPredicted RBP11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 CHMP4BP1P59074 171 aa11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 IKQ13123 557 aaPredicted RBP11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 BFSP2Q13515 415 aa11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 UBE3CQ15386 1083 aa11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 TKFCQ3LXA3 575 aa11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 SBK1Q52WX2 424 aa11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 NFRKBQ6P4R8 1299 aa11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 PRSS33Q8NF86 280 aa11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 NEK9Q8TD19 979 aa11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 DHX38Q92620 1227 aaKnown RBP11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 MKL1Q969V6 931 aa11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 EPB41L4AQ9HCS5 686 aaPredicted RBP11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 GPHNQ9NQX3 736 aaPredicted RBP11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 NOD1Q9Y239 953 aa11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 SPTBN4Q9H254 2564 aa11.05□□□□□ -0.64
SMARCD2-208ENST00000580054 PLIN4Q96Q06 1357 aa11.04□□□□□ -0.64
SMARCD2-208ENST00000580054 GSG1L2A8MUP6 293 aa11.04□□□□□ -0.64
SMARCD2-208ENST00000580054 NBNO60934 754 aa11.04□□□□□ -0.64
SMARCD2-208ENST00000580054 HMMRO75330 724 aa11.04□□□□□ -0.64
SMARCD2-208ENST00000580054 TTLL1O95922 423 aa11.04□□□□□ -0.64
SMARCD2-208ENST00000580054 KCTD1Q719H9 257 aa11.04□□□□□ -0.64
SMARCD2-208ENST00000580054 LRRC8DQ7L1W4 858 aa11.04□□□□□ -0.64
SMARCD2-208ENST00000580054 RPAP2Q8IXW5 612 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms