RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 ERC1Q8IUD2 1116 aa7.57□□□□□ -1.2
COPS3-216ENST00000579716 PLD6Q8N2A8 252 aaKnown RBP7.57□□□□□ -1.2
COPS3-216ENST00000579716 TAF4BQ92750 862 aa7.57□□□□□ -1.2
COPS3-216ENST00000579716 FEZ1Q99689 392 aa7.57□□□□□ -1.2
COPS3-216ENST00000579716 DUSP9Q99956 384 aaKnown RBP7.57□□□□□ -1.2
COPS3-216ENST00000579716 LIN7BQ9HAP6 207 aa7.57□□□□□ -1.2
COPS3-216ENST00000579716 CPSF2Q9P2I0 782 aaKnown RBP7.57□□□□□ -1.2
COPS3-216ENST00000579716 EIF4G1Q04637 1599 aaKnown RBP7.57□□□□□ -1.2
COPS3-216ENST00000579716 FAM13AO94988 1023 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 ARIH2O95376 493 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 RNASE1P07998 156 aaKnown RBP7.56□□□□□ -1.2
COPS3-216ENST00000579716 STIP1P31948 543 aaKnown RBP7.56□□□□□ -1.2
COPS3-216ENST00000579716 CAP2P40123 477 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 COBLL1Q53SF7 1204 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 DACT2Q5SW24 774 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 KIAA0319Q5VV43 1072 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 KIAA1614Q5VZ46 1190 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 C16orf86Q6ZW13 317 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 CILP2Q8IUL8 1156 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 FAM181AQ8N9Y4 354 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 NELL1Q92832 810 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 ATP6V1E2Q96A05 226 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 ZBTB10Q96DT7 871 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 ZNF396Q96N95 335 aaPredicted RBP7.56□□□□□ -1.2
COPS3-216ENST00000579716 DEPDC7Q96QD5 511 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 LZTS2Q9BRK4 669 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 TRIM55Q9BYV6 548 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 TSPYL1Q9H0U9 437 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 ABCG4Q9H172 646 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 ZNF576Q9H609 170 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 SNTG2Q9NY99 539 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 EPS15L1Q9UBC2 864 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 PCSK1NQ9UHG2 260 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 RRP15Q9Y3B9 282 aaKnown RBP7.56□□□□□ -1.2
COPS3-216ENST00000579716 DAGLAQ9Y4D2 1042 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 TTLL3Q9Y4R7 772 aa7.56□□□□□ -1.2
COPS3-216ENST00000579716 FANCIQ9NVI1 1328 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 ESYT3A0FGR9 886 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 H0Y3Z8 333 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 FOXN3O00409 490 aaPredicted RBP7.55□□□□□ -1.2
COPS3-216ENST00000579716 RASGRP1O95267 797 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 RAC2P15153 192 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 ATF7P17544 494 aaPredicted RBP7.55□□□□□ -1.2
COPS3-216ENST00000579716 FUT4P22083 530 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 ITPKAP23677 461 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 UBA7P41226 1012 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 HTR3AP46098 478 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 COPAP53621 1224 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 RACK1P63244 317 aaKnown RBP7.55□□□□□ -1.2
COPS3-216ENST00000579716 PURAQ00577 322 aaKnown RBP7.55□□□□□ -1.2
COPS3-216ENST00000579716 FKBP4Q02790 459 aaKnown RBP eCLIP7.55□□□□□ -1.2
COPS3-216ENST00000579716 MCL1Q07820 350 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 DMTNQ08495 405 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 COX10Q12887 443 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 STK3Q13188 491 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 PICALMQ13492 652 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 PLCL1Q15111 1095 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 ZC3H12BQ5HYM0 836 aaKnown RBP7.55□□□□□ -1.2
COPS3-216ENST00000579716 ISM2Q6H9L7 571 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 TAX1BP1Q86VP1 789 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 AP1M1Q9BXS5 423 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 RMI1Q9H9A7 625 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 PDRG1Q9NUG6 133 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 TPCN1Q9ULQ1 816 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 AP4E1Q9UPM8 1137 aa7.55□□□□□ -1.2
COPS3-216ENST00000579716 SYNGAP1Q96PV0 1343 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 RASSF10A6NK89 507 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 C9IYK1 514 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 K7ENM7 598 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 TMPRSS2O15393 492 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 RHOBTB3O94955 611 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 F2P00734 622 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 TNFAIP3P21580 790 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 ST13P50502 369 aaKnown RBP7.54□□□□□ -1.2
COPS3-216ENST00000579716 ARHGAP4P98171 946 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 CDK5R2Q13319 367 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 AMOTQ4VCS5 1084 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 FBLN7Q53RD9 439 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 ZNF713Q8N859 430 aaPredicted RBP7.54□□□□□ -1.2
COPS3-216ENST00000579716 RMDN2Q96LZ7 410 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 RAD18Q9NS91 495 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 TRMT1Q9NXH9 659 aaKnown RBP7.54□□□□□ -1.2
COPS3-216ENST00000579716 CRIM1Q9NZV1 1036 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 RABL2AQ9UBK7 228 aaPredicted RBP7.54□□□□□ -1.2
COPS3-216ENST00000579716 TBK1Q9UHD2 729 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 PLAGL2Q9UPG8 496 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 PCDHGC5Q9Y5F6 944 aa7.54□□□□□ -1.2
COPS3-216ENST00000579716 A6NCN8 305 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 ZNF862O60290 1169 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 SSBP05455 408 aaKnown RBP eCLIP7.53□□□□□ -1.2
COPS3-216ENST00000579716 ADD2P35612 726 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 GJA8P48165 433 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 RAB27AP51159 221 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 TPD52P55327 224 aaPredicted RBP7.53□□□□□ -1.2
COPS3-216ENST00000579716 UBXN2AP68543 259 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 ROR1Q01973 937 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 FMR1Q06787 632 aaKnown RBP eCLIP7.53□□□□□ -1.2
COPS3-216ENST00000579716 FAAP100Q0VG06 881 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 TBX2Q13207 712 aaPredicted RBP7.53□□□□□ -1.2
COPS3-216ENST00000579716 RASA3Q14644 834 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms