RNA–Protein interactions for RNA: ENST00000578357.5

CUEDC1-208, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-208ENST00000578357 CPT1AP50416 773 aa11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 IRX6P78412 446 aaPredicted RBP11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 TTLL4Q14679 1199 aa11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 PWP2Q15269 919 aaKnown RBP11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 BRDTQ58F21 947 aaPredicted RBP11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 MUM1L1Q5H9M0 696 aa11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 KCTD1Q719H9 257 aa11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 FBXO16Q8IX29 292 aaPredicted RBP11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 MORC4Q8TE76 937 aa11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 CHMP4CQ96CF2 233 aa11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 WDR11Q9BZH6 1224 aa11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 NAPBQ9H115 298 aa11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 TRMT13Q9NUP7 481 aaKnown RBP11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 CCPG1Q9ULG6 757 aa11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 PRR12Q9ULL5 1215 aa11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 STX8Q9UNK0 236 aa11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 ARIH1Q9Y4X5 557 aaPredicted RBP11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 CHD7Q9P2D1 2997 aa11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 XIRP2A4UGR9 3374 aa11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 TNKSO95271 1327 aa11.83□□□□□ -0.52
CUEDC1-208ENST00000578357 PLIN4Q96Q06 1357 aa11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 TSPY2A6NKD2 308 aa11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 RFXAPO00287 272 aa11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 KPNA6O60684 536 aa11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 ICAM1P05362 532 aa11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 CA3P07451 260 aa11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 MYL3P08590 195 aa11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 PTGS1P23219 599 aa11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 KCNQ1P51787 676 aa11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 SNAP25P60880 206 aa11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 PURAQ00577 322 aaKnown RBP11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 PPARAQ07869 468 aa11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 TMEM63BQ5T3F8 832 aa11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 VWCEQ96DN2 955 aa11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 SLC9A7Q96T83 725 aa11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 MTG1Q9BT17 334 aaPredicted RBP11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 FTOQ9C0B1 505 aaKnown RBP eCLIP11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 DDX49Q9Y6V7 483 aaKnown RBP11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 GREB1LQ9C091 1923 aaPredicted RBP11.82□□□□□ -0.52
CUEDC1-208ENST00000578357 RBM47A0AV96 593 aaKnown RBP11.81□□□□□ -0.52
CUEDC1-208ENST00000578357 M0R2C6 588 aa11.81□□□□□ -0.52
CUEDC1-208ENST00000578357 PITPNM1O00562 1244 aa11.81□□□□□ -0.52
CUEDC1-208ENST00000578357 BAATQ14032 418 aaPredicted RBP11.81□□□□□ -0.52
CUEDC1-208ENST00000578357 NBPF20Q3BBV1 942 aa11.81□□□□□ -0.52
CUEDC1-208ENST00000578357 FAM47CQ5HY64 1035 aa11.81□□□□□ -0.52
CUEDC1-208ENST00000578357 EXOC6Q8TAG9 804 aa11.81□□□□□ -0.52
CUEDC1-208ENST00000578357 HLA-CQ95604 372 aa11.81□□□□□ -0.52
CUEDC1-208ENST00000578357 MPHOSPH6Q99547 160 aaKnown RBP11.81□□□□□ -0.52
CUEDC1-208ENST00000578357 DCTPP1Q9H773 170 aa11.81□□□□□ -0.52
CUEDC1-208ENST00000578357 CERS4Q9HA82 394 aa11.81□□□□□ -0.52
CUEDC1-208ENST00000578357 PNMA2Q9UL42 364 aa11.81□□□□□ -0.52
CUEDC1-208ENST00000578357 MCM3APO60318 1980 aa11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 B4DLN1 442 aa11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 NKRFO15226 690 aaKnown RBP eCLIP11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 TLL1O43897 1013 aa11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 IQCF3P0C7M6 154 aa11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 PTPN11Q06124 597 aaPredicted RBP11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 BFSP2Q13515 415 aa11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 NFRKBQ6P4R8 1299 aa11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 HERC6Q8IVU3 1022 aa11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 OR6J1Q8NGC5 347 aa11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 ARNTL2Q8WYA1 636 aa11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 PURBQ96QR8 312 aaKnown RBP11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 IL17RBQ9NRM6 502 aa11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 HCN4Q9Y3Q4 1203 aa11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 RAD50Q92878 1312 aa11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 TRANK1O15050 2925 aa11.8□□□□□ -0.52
CUEDC1-208ENST00000578357 PTPDC1A2A3K4 754 aa11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 A6NJR5 290 aa11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 RANBP6O60518 1105 aaKnown RBP11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 ALDH5A1P51649 535 aaPredicted RBP11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 TAP1Q03518 808 aa11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 PDE4DQ08499 809 aa11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 CCDC96Q2M329 555 aa11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 BTNL9Q6UXG8 535 aa11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 DCAF4Q8WV16 495 aa11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 SEC62Q99442 399 aaKnown RBP11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 LRFN3Q9BTN0 628 aa11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 RANBP17Q9H2T7 1088 aaKnown RBP11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 EPHX3Q9H6B9 360 aa11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 MTMR7Q9Y216 660 aa11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 NOD1Q9Y239 953 aa11.79□□□□□ -0.52
CUEDC1-208ENST00000578357 NMT2O60551 498 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 BAIAP3O94812 1187 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 SLC16A2P36021 539 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 CTDSPL2Q05D32 466 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 PPP2R5BQ15173 497 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 TMEM31Q5JXX7 168 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 RNF207Q6ZRF8 634 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 CCDC155Q8N6L0 562 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 DNERQ8NFT8 737 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 SCFD2Q8WU76 684 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 ZBED2Q9BTP6 218 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 INCENPQ9NQS7 918 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 LMCD1Q9NZU5 365 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 TTC41PQ6P2S7 1318 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 SALL3Q9BXA9 1300 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms