RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 AKR1A1P14550 325 aa10.11□□□□□ -0.79
SMG6-216ENST00000575176 CST5P28325 142 aaPredicted RBP10.11□□□□□ -0.79
SMG6-216ENST00000575176 SLC4A3P48751 1232 aa10.11□□□□□ -0.79
SMG6-216ENST00000575176 EVCP57679 992 aa10.11□□□□□ -0.79
SMG6-216ENST00000575176 LRRC26Q2I0M4 334 aa10.11□□□□□ -0.79
SMG6-216ENST00000575176 TYW1BQ6NUM6 668 aa10.11□□□□□ -0.79
SMG6-216ENST00000575176 NSMFQ6X4W1 530 aa10.11□□□□□ -0.79
SMG6-216ENST00000575176 TMTC3Q6ZXV5 915 aa10.11□□□□□ -0.79
SMG6-216ENST00000575176 DHX32Q7L7V1 743 aaKnown RBP10.11□□□□□ -0.79
SMG6-216ENST00000575176 FBXO16Q8IX29 292 aaPredicted RBP10.11□□□□□ -0.79
SMG6-216ENST00000575176 SYTL5Q8TDW5 730 aaPredicted RBP10.11□□□□□ -0.79
SMG6-216ENST00000575176 PDGFCQ9NRA1 345 aa10.11□□□□□ -0.79
SMG6-216ENST00000575176 PTPRSQ13332 1948 aa10.11□□□□□ -0.79
SMG6-216ENST00000575176 CHD7Q9P2D1 2997 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 LOC102724159A0A0B4J2E5 919 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 RGS20O76081 388 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 ARIH2O95376 493 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 SEC24BO95487 1268 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 TFRCP02786 760 aaKnown RBP10.1□□□□□ -0.79
SMG6-216ENST00000575176 CDC27P30260 824 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 ACVR2BQ13705 512 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 TOB2Q14106 344 aaPredicted RBP10.1□□□□□ -0.79
SMG6-216ENST00000575176 PWP2Q15269 919 aaKnown RBP10.1□□□□□ -0.79
SMG6-216ENST00000575176 CCDC144BQ3MJ40 725 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 C8orf34Q49A92 452 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 GJC2Q5T442 439 aaPredicted RBP10.1□□□□□ -0.79
SMG6-216ENST00000575176 CMTR1Q8N1G2 835 aaKnown RBP10.1□□□□□ -0.79
SMG6-216ENST00000575176 IL31RAQ8NI17 732 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 DDX11Q96FC9 970 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 MAF1Q9H063 256 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 ABHD16BQ9H3Z7 469 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 C11orf49Q9H6J7 331 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 SLC5A4Q9NY91 659 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 PHF24Q9UPV7 400 aa10.1□□□□□ -0.79
SMG6-216ENST00000575176 GBF1Q92538 1859 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 H0YGN5 161 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 ADAMTS3O15072 1205 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 PGK1P00558 417 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 SMPD1P17405 629 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 RPS6KB1P23443 525 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 SMARCA1P28370 1054 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 ADCYAP1R1P41586 468 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 RCAN1P53805 252 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 GJA9P57773 515 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 SART3Q15020 963 aaKnown RBP10.09□□□□□ -0.79
SMG6-216ENST00000575176 RNF20Q5VTR2 975 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 CASC1Q6TDU7 716 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 RNF207Q6ZRF8 634 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 NECAB2Q7Z6G3 386 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 CATIPQ7Z7H3 387 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 MICU3Q86XE3 530 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 FBXO11Q86XK2 927 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 JAKMIP1Q96N16 626 aaKnown RBP10.09□□□□□ -0.79
SMG6-216ENST00000575176 TAAR1Q96RJ0 339 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 AMNQ9BXJ7 453 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 XPNPEP3Q9NQH7 507 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 ZHX1Q9UKY1 873 aaPredicted RBP10.09□□□□□ -0.79
SMG6-216ENST00000575176 SCN5AQ14524 2016 aa10.09□□□□□ -0.79
SMG6-216ENST00000575176 A0A1W2PQ45 241 aaPredicted RBP10.08□□□□□ -0.8
SMG6-216ENST00000575176 A0A1W2PQY0 241 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 PTPDC1A2A3K4 754 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 MEIS2O14770 477 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 DUSP11O75319 330 aaKnown RBP10.08□□□□□ -0.8
SMG6-216ENST00000575176 REC8O95072 547 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 CALML3P27482 149 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 CNGA1P29973 690 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 KRT32Q14532 448 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 NTRK3Q16288 839 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 CCDC62Q6P9F0 684 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 HOMER1Q86YM7 354 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 DNERQ8NFT8 737 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 NUP133Q8WUM0 1156 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 ZSWIM6Q9HCJ5 1215 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 VAT1LQ9HCJ6 419 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 VTA1Q9NP79 307 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 PNMA2Q9UL42 364 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 CTDP1Q9Y5B0 961 aaPredicted RBP10.08□□□□□ -0.8
SMG6-216ENST00000575176 COL6A3P12111 3177 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 TRANK1O15050 2925 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 REV3LO60673 3130 aa10.08□□□□□ -0.8
SMG6-216ENST00000575176 TRIP12Q14669 1992 aaPredicted RBP10.08□□□□□ -0.8
SMG6-216ENST00000575176 GRIN2DO15399 1336 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 PNMA6FA0A0J9YX94 578 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 hCG_1642624A0A1W2PR95 340 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 ERICH2A1L162 156 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 ASB14A6NK59 587 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 RARBP10826 455 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 APOBRQ0VD83 1088 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 SEMA3FQ13275 785 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 C1orf53Q5VUE5 145 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 Q6ZUG5 572 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 FANCBQ8NB91 859 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 PDCD2LQ9BRP1 358 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 TM6SF1Q9BZW5 370 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 PXMP2Q9NR77 195 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 CNPY2Q9Y2B0 182 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 PCDHA1Q9Y5I3 950 aa10.07□□□□□ -0.8
SMG6-216ENST00000575176 KLF18A0A0U1RQI7 1052 aa10.06□□□□□ -0.8
SMG6-216ENST00000575176 CCDC69A6NI79 296 aa10.06□□□□□ -0.8
SMG6-216ENST00000575176 PIK3CDO00329 1044 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms