RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 RAD50Q92878 1312 aa13.48□□□□□ -0.25
CHMP6-202ENST00000571457 LOC102724159A0A0B4J2E5 919 aa13.48□□□□□ -0.25
CHMP6-202ENST00000571457 PRR33A8MZF0 331 aa13.48□□□□□ -0.25
CHMP6-202ENST00000571457 KPNA6O60684 536 aa13.48□□□□□ -0.25
CHMP6-202ENST00000571457 PLA2G6O60733 806 aa13.48□□□□□ -0.25
CHMP6-202ENST00000571457 CHGBP05060 677 aa13.48□□□□□ -0.25
CHMP6-202ENST00000571457 IQCF3P0C7M6 154 aa13.48□□□□□ -0.25
CHMP6-202ENST00000571457 GNAT2P19087 354 aa13.48□□□□□ -0.25
CHMP6-202ENST00000571457 SLC1A4P43007 532 aa13.48□□□□□ -0.25
CHMP6-202ENST00000571457 PURAQ00577 322 aaKnown RBP13.48□□□□□ -0.25
CHMP6-202ENST00000571457 BFSP2Q13515 415 aa13.48□□□□□ -0.25
CHMP6-202ENST00000571457 PWP2Q15269 919 aaKnown RBP13.48□□□□□ -0.25
CHMP6-202ENST00000571457 FAM47CQ5HY64 1035 aa13.48□□□□□ -0.25
CHMP6-202ENST00000571457 ALYREFQ86V81 257 aaKnown RBP13.48□□□□□ -0.25
CHMP6-202ENST00000571457 MORC4Q8TE76 937 aa13.48□□□□□ -0.25
CHMP6-202ENST00000571457 KHSRPQ92945 711 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHMP6-202ENST00000571457 WDR11Q9BZH6 1224 aa13.48□□□□□ -0.25
CHMP6-202ENST00000571457 NOD1Q9Y239 953 aa13.48□□□□□ -0.25
CHMP6-202ENST00000571457 SCN5AQ14524 2016 aa13.47□□□□□ -0.25
CHMP6-202ENST00000571457 PRDM1O75626 825 aa13.47□□□□□ -0.25
CHMP6-202ENST00000571457 MYL3P08590 195 aa13.47□□□□□ -0.25
CHMP6-202ENST00000571457 TSPY3P0CV98 308 aa13.47□□□□□ -0.25
CHMP6-202ENST00000571457 TSPY8P0CW00 308 aa13.47□□□□□ -0.25
CHMP6-202ENST00000571457 PTGS1P23219 599 aa13.47□□□□□ -0.25
CHMP6-202ENST00000571457 TDO2P48775 406 aa13.47□□□□□ -0.25
CHMP6-202ENST00000571457 PTPN11Q06124 597 aaPredicted RBP13.47□□□□□ -0.25
CHMP6-202ENST00000571457 LRRFIP1Q32MZ4 808 aaKnown RBP13.47□□□□□ -0.25
CHMP6-202ENST00000571457 NFRKBQ6P4R8 1299 aa13.47□□□□□ -0.25
CHMP6-202ENST00000571457 NSMFQ6X4W1 530 aa13.47□□□□□ -0.25
CHMP6-202ENST00000571457 CCDC155Q8N6L0 562 aa13.47□□□□□ -0.25
CHMP6-202ENST00000571457 NEDD1Q8NHV4 660 aa13.47□□□□□ -0.25
CHMP6-202ENST00000571457 ZBED2Q9BTP6 218 aa13.47□□□□□ -0.25
CHMP6-202ENST00000571457 PLIN4Q96Q06 1357 aa13.46□□□□□ -0.25
CHMP6-202ENST00000571457 CCER2I3L3R5 266 aa13.46□□□□□ -0.25
CHMP6-202ENST00000571457 LPXNO60711 386 aa13.46□□□□□ -0.25
CHMP6-202ENST00000571457 SLC3A2P08195 630 aaKnown RBP13.46□□□□□ -0.25
CHMP6-202ENST00000571457 ALADP13716 330 aa13.46□□□□□ -0.25
CHMP6-202ENST00000571457 PDE4BQ07343 736 aa13.46□□□□□ -0.25
CHMP6-202ENST00000571457 NBPF20Q3BBV1 942 aa13.46□□□□□ -0.25
CHMP6-202ENST00000571457 TMEM63BQ5T3F8 832 aa13.46□□□□□ -0.25
CHMP6-202ENST00000571457 GJD3Q8N144 294 aa13.46□□□□□ -0.25
CHMP6-202ENST00000571457 OR6J1Q8NGC5 347 aa13.46□□□□□ -0.25
CHMP6-202ENST00000571457 MPHOSPH6Q99547 160 aaKnown RBP13.46□□□□□ -0.25
CHMP6-202ENST00000571457 UBE2ZQ9H832 354 aaPredicted RBP13.46□□□□□ -0.25
CHMP6-202ENST00000571457 SCN10AQ9Y5Y9 1956 aa13.45□□□□□ -0.26
CHMP6-202ENST00000571457 TET1Q8NFU7 2136 aa13.45□□□□□ -0.26
CHMP6-202ENST00000571457 NKRFO15226 690 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHMP6-202ENST00000571457 ARHGEF15O94989 841 aa13.45□□□□□ -0.26
CHMP6-202ENST00000571457 APPP05067 770 aa13.45□□□□□ -0.26
CHMP6-202ENST00000571457 MS4A1P11836 297 aa13.45□□□□□ -0.26
CHMP6-202ENST00000571457 MCCP23508 829 aa13.45□□□□□ -0.26
CHMP6-202ENST00000571457 CSPP1Q1MSJ5 1256 aa13.45□□□□□ -0.26
CHMP6-202ENST00000571457 MUM1L1Q5H9M0 696 aa13.45□□□□□ -0.26
CHMP6-202ENST00000571457 FAM178BQ8IXR5 827 aa13.45□□□□□ -0.26
CHMP6-202ENST00000571457 APPBP2Q92624 585 aa13.45□□□□□ -0.26
CHMP6-202ENST00000571457 NACAP1Q9BZK3 213 aa13.45□□□□□ -0.26
CHMP6-202ENST00000571457 CD320Q9NPF0 282 aa13.45□□□□□ -0.26
CHMP6-202ENST00000571457 CCPG1Q9ULG6 757 aa13.45□□□□□ -0.26
CHMP6-202ENST00000571457 DDX49Q9Y6V7 483 aaKnown RBP13.45□□□□□ -0.26
CHMP6-202ENST00000571457 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.44□□□□□ -0.26
CHMP6-202ENST00000571457 RBM47A0AV96 593 aaKnown RBP13.44□□□□□ -0.26
CHMP6-202ENST00000571457 A6NJR5 290 aa13.44□□□□□ -0.26
CHMP6-202ENST00000571457 PARNO95453 639 aaKnown RBP13.44□□□□□ -0.26
CHMP6-202ENST00000571457 ICAM1P05362 532 aa13.44□□□□□ -0.26
CHMP6-202ENST00000571457 ZFYP08048 801 aaPredicted RBP13.44□□□□□ -0.26
CHMP6-202ENST00000571457 SSTR3P32745 418 aaPredicted RBP13.44□□□□□ -0.26
CHMP6-202ENST00000571457 ALDH5A1P51649 535 aaPredicted RBP13.44□□□□□ -0.26
CHMP6-202ENST00000571457 TFAP4Q01664 338 aa13.44□□□□□ -0.26
CHMP6-202ENST00000571457 LEXMQ3ZCV2 418 aa13.44□□□□□ -0.26
CHMP6-202ENST00000571457 RCSD1Q6JBY9 416 aa13.44□□□□□ -0.26
CHMP6-202ENST00000571457 CAGE1Q8TC20 777 aa13.44□□□□□ -0.26
CHMP6-202ENST00000571457 PANK1Q8TE04 598 aa13.44□□□□□ -0.26
CHMP6-202ENST00000571457 AFAP1L1Q8TED9 768 aa13.44□□□□□ -0.26
CHMP6-202ENST00000571457 GDPD5Q8WTR4 605 aa13.44□□□□□ -0.26
CHMP6-202ENST00000571457 UIMC1Q96RL1 719 aa13.44□□□□□ -0.26
CHMP6-202ENST00000571457 KCNH6Q9H252 994 aa13.44□□□□□ -0.26
CHMP6-202ENST00000571457 PRR12Q9ULL5 1215 aa13.44□□□□□ -0.26
CHMP6-202ENST00000571457 TANC1Q9C0D5 1861 aa13.44□□□□□ -0.26
CHMP6-202ENST00000571457 GPAA1O43292 621 aa13.43□□□□□ -0.26
CHMP6-202ENST00000571457 MRE11P49959 708 aa13.43□□□□□ -0.26
CHMP6-202ENST00000571457 WDR5P61964 334 aaKnown RBP13.43□□□□□ -0.26
CHMP6-202ENST00000571457 BAATQ14032 418 aaPredicted RBP13.43□□□□□ -0.26
CHMP6-202ENST00000571457 PPP2R5BQ15173 497 aa13.43□□□□□ -0.26
CHMP6-202ENST00000571457 PUS10Q3MIT2 529 aaKnown RBP13.43□□□□□ -0.26
CHMP6-202ENST00000571457 KCTD1Q719H9 257 aa13.43□□□□□ -0.26
CHMP6-202ENST00000571457 KBTBD3Q8NAB2 608 aa13.43□□□□□ -0.26
CHMP6-202ENST00000571457 SCFD2Q8WU76 684 aa13.43□□□□□ -0.26
CHMP6-202ENST00000571457 OSBP2Q969R2 916 aa13.43□□□□□ -0.26
CHMP6-202ENST00000571457 TGS1Q96RS0 853 aaKnown RBP13.43□□□□□ -0.26
CHMP6-202ENST00000571457 RAD9AQ99638 391 aa13.43□□□□□ -0.26
CHMP6-202ENST00000571457 EPB41L4AQ9HCS5 686 aaPredicted RBP13.43□□□□□ -0.26
CHMP6-202ENST00000571457 LCHNA4D1U4 455 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 B4DLN1 442 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 PATL2C9JE40 543 aaKnown RBP13.42□□□□□ -0.26
CHMP6-202ENST00000571457 RNF113AO15541 343 aaKnown RBP13.42□□□□□ -0.26
CHMP6-202ENST00000571457 EFCAB14O75071 495 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 KCNA5P22460 613 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 MRPL12P52815 198 aaKnown RBP13.42□□□□□ -0.26
CHMP6-202ENST00000571457 ERVK-21P61565 698 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 PDE4DQ08499 809 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms