RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SMIM5Q71RC9 77 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 SND1Q7KZF4 910 aaKnown RBP eCLIP19.46■□□□□ 0.71
SCARF1-205ENST00000571272 CCDC47Q96A33 483 aaKnown RBP19.46■□□□□ 0.71
SCARF1-205ENST00000571272 IFIH1Q9BYX4 1025 aaKnown RBP19.46■□□□□ 0.71
SCARF1-205ENST00000571272 FLT1P17948 1338 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 GOLGA6BA6NDN3 693 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 STXBP3O00186 592 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 PPFIA4O75335 1185 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 HIBADHP31937 336 aaKnown RBP19.45■□□□□ 0.7
SCARF1-205ENST00000571272 TECP42680 631 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 SBK1Q52WX2 424 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 SLC44A5Q8NCS7 719 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 RRP36Q96EU6 259 aaKnown RBP19.45■□□□□ 0.7
SCARF1-205ENST00000571272 RABEP2Q9H5N1 569 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 EHD2Q9NZN4 543 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 SNX12Q9UMY4 172 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 GRM4Q14833 912 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 DGKHQ86XP1 1220 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 FAM114A1Q8IWE2 563 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 CCDC24Q8N4L8 307 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 ANKRD13CQ8N6S4 541 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 BARHL2Q9NY43 387 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 ARHGAP20Q9P2F6 1191 aa19.45■□□□□ 0.7
SCARF1-205ENST00000571272 DEF6Q9H4E7 631 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 JRKLQ9Y4A0 524 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 PCDHA13Q9Y5I0 950 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 GOLGA6CA6NDK9 693 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 GOLGA6DP0CG33 693 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 ATP2B2Q01814 1243 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 IQCEQ6IPM2 695 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 CCDC70Q6NSX1 233 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 NFRKBQ6P4R8 1299 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 TXNRD3Q86VQ6 643 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 KIAA0895Q8NCT3 520 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 TRIM58Q8NG06 486 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 FAM76AQ8TAV0 307 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 ERGIC2Q96RQ1 377 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 SEMA6BQ9H3T3 888 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 MMRN2Q9H8L6 949 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 GOLGA6AQ9NYA3 693 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 FAM184BQ9ULE4 1060 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 ZNF652Q9Y2D9 606 aa19.44■□□□□ 0.7
SCARF1-205ENST00000571272 MYH14Q7Z406 1995 aaKnown RBP19.44■□□□□ 0.7
SCARF1-205ENST00000571272 PHLPP1O60346 1717 aa19.43■□□□□ 0.7
SCARF1-205ENST00000571272 USO1O60763 962 aaKnown RBP19.43■□□□□ 0.7
SCARF1-205ENST00000571272 TACC1O75410 805 aa19.43■□□□□ 0.7
SCARF1-205ENST00000571272 OR52Z1P0C646 297 aa19.43■□□□□ 0.7
SCARF1-205ENST00000571272 TSPY3P0CV98 308 aa19.43■□□□□ 0.7
SCARF1-205ENST00000571272 TSPY8P0CW00 308 aa19.43■□□□□ 0.7
SCARF1-205ENST00000571272 SF3B3Q15393 1217 aaKnown RBP19.43■□□□□ 0.7
SCARF1-205ENST00000571272 DZIP1Q86YF9 867 aaKnown RBP19.43■□□□□ 0.7
SCARF1-205ENST00000571272 EIF4A3P38919 411 aaKnown RBP19.43■□□□□ 0.7
SCARF1-205ENST00000571272 MAGEA9P43362 315 aa19.43■□□□□ 0.7
SCARF1-205ENST00000571272 AENQ8WTP8 325 aaKnown RBP19.43■□□□□ 0.7
SCARF1-205ENST00000571272 EHD4Q9H223 541 aa19.43■□□□□ 0.7
SCARF1-205ENST00000571272 KIF11P52732 1056 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 NAPAP54920 295 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 C12orf60Q5U649 245 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 ZSCAN29Q8IWY8 852 aaPredicted RBP19.42■□□□□ 0.7
SCARF1-205ENST00000571272 FNBP4Q8N3X1 1017 aaPredicted RBP19.42■□□□□ 0.7
SCARF1-205ENST00000571272 SPATA4Q8NEY3 305 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 TSGA10Q9BZW7 698 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 SH2D4AQ9H788 454 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 PLAGL2Q9UPG8 496 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 NCK2O43639 380 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 AKR1B10O60218 316 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 PRPHP41219 470 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 GNAQP50148 359 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 C7orf25Q9BPX7 421 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 LAD1O00515 517 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 KCNQ4P56696 695 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 DAGLBQ8NCG7 672 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 VAT1LQ9HCJ6 419 aa19.42■□□□□ 0.7
SCARF1-205ENST00000571272 ZNF335Q9H4Z2 1342 aaPredicted RBP19.41■□□□□ 0.7
SCARF1-205ENST00000571272 A0A1W2PQJ5 194 aa19.41■□□□□ 0.7
SCARF1-205ENST00000571272 CORO7P57737 925 aa19.41■□□□□ 0.7
SCARF1-205ENST00000571272 CDK17Q00537 523 aa19.41■□□□□ 0.7
SCARF1-205ENST00000571272 TTC19Q6DKK2 380 aaPredicted RBP19.41■□□□□ 0.7
SCARF1-205ENST00000571272 RRAGAQ7L523 313 aa19.41■□□□□ 0.7
SCARF1-205ENST00000571272 DYMQ7RTS9 669 aa19.41■□□□□ 0.7
SCARF1-205ENST00000571272 OSBPL9Q96SU4 736 aa19.41■□□□□ 0.7
SCARF1-205ENST00000571272 TMEM47Q9BQJ4 181 aa19.41■□□□□ 0.7
SCARF1-205ENST00000571272 NDST4Q9H3R1 872 aa19.41■□□□□ 0.7
SCARF1-205ENST00000571272 CUEDC2Q9H467 287 aa19.41■□□□□ 0.7
SCARF1-205ENST00000571272 KLRF2D3W0D1 207 aa19.41■□□□□ 0.7
SCARF1-205ENST00000571272 RPS8P62241 208 aaKnown RBP19.41■□□□□ 0.7
SCARF1-205ENST00000571272 DNAJC21Q5F1R6 531 aaKnown RBP19.41■□□□□ 0.7
SCARF1-205ENST00000571272 FIGNQ5HY92 759 aa19.41■□□□□ 0.7
SCARF1-205ENST00000571272 PACS2Q86VP3 889 aa19.41■□□□□ 0.7
SCARF1-205ENST00000571272 ZNF444Q8N0Y2 327 aaPredicted RBP19.41■□□□□ 0.7
SCARF1-205ENST00000571272 MMGT1Q8N4V1 131 aa19.41■□□□□ 0.7
SCARF1-205ENST00000571272 AK8Q96MA6 479 aa19.41■□□□□ 0.7
SCARF1-205ENST00000571272 SMCO2A6NFE2 343 aa19.4■□□□□ 0.7
SCARF1-205ENST00000571272 TXKP42681 527 aa19.4■□□□□ 0.7
SCARF1-205ENST00000571272 VWA3BQ502W6 1294 aa19.4■□□□□ 0.7
SCARF1-205ENST00000571272 CCDC181Q5TID7 509 aa19.4■□□□□ 0.7
SCARF1-205ENST00000571272 CNNM4Q6P4Q7 775 aa19.4■□□□□ 0.7
SCARF1-205ENST00000571272 AMOTL1Q8IY63 956 aa19.4■□□□□ 0.7
SCARF1-205ENST00000571272 SH3RF3Q8TEJ3 882 aaPredicted RBP19.4■□□□□ 0.7
SCARF1-205ENST00000571272 MMTAG2Q9BU76 263 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms