RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 FBXO40Q9UH90 709 aa17.78■□□□□ 0.44
SNHG20-204ENST00000566583 KIAA1217Q5T5P2 1943 aa17.78■□□□□ 0.44
SNHG20-204ENST00000566583 MRPL12P52815 198 aaKnown RBP17.77■□□□□ 0.44
SNHG20-204ENST00000566583 CCNA1P78396 465 aa17.77■□□□□ 0.44
SNHG20-204ENST00000566583 RESTQ13127 1097 aa17.77■□□□□ 0.44
SNHG20-204ENST00000566583 NR5A1Q13285 461 aa17.77■□□□□ 0.44
SNHG20-204ENST00000566583 USP17L6PQ6QN14 398 aa17.77■□□□□ 0.44
SNHG20-204ENST00000566583 MCF2L2Q86YR7 1114 aa17.77■□□□□ 0.44
SNHG20-204ENST00000566583 FOXP1Q9H334 677 aaPredicted RBP17.77■□□□□ 0.44
SNHG20-204ENST00000566583 A1CFQ9NQ94 594 aaKnown RBP17.77■□□□□ 0.44
SNHG20-204ENST00000566583 COL20A1Q9P218 1284 aa17.77■□□□□ 0.44
SNHG20-204ENST00000566583 PCDHA6Q9UN73 950 aa17.77■□□□□ 0.44
SNHG20-204ENST00000566583 PCDHA8Q9Y5H6 950 aa17.77■□□□□ 0.44
SNHG20-204ENST00000566583 CASP8AP2Q9UKL3 1982 aa17.77■□□□□ 0.43
SNHG20-204ENST00000566583 VPS37CA5D8V6 355 aaPredicted RBP17.76■□□□□ 0.43
SNHG20-204ENST00000566583 H3BQV1 296 aa17.76■□□□□ 0.43
SNHG20-204ENST00000566583 TRPA1O75762 1119 aa17.76■□□□□ 0.43
SNHG20-204ENST00000566583 TBC1D8O95759 1140 aa17.76■□□□□ 0.43
SNHG20-204ENST00000566583 ZSCAN22P10073 491 aaPredicted RBP17.76■□□□□ 0.43
SNHG20-204ENST00000566583 KRT2P35908 639 aa17.76■□□□□ 0.43
SNHG20-204ENST00000566583 UBE2SQ16763 222 aa17.76■□□□□ 0.43
SNHG20-204ENST00000566583 NOM1Q5C9Z4 860 aaKnown RBP17.76■□□□□ 0.43
SNHG20-204ENST00000566583 EARS2Q5JPH6 523 aaKnown RBP17.76■□□□□ 0.43
SNHG20-204ENST00000566583 IFFO2Q5TF58 517 aa17.76■□□□□ 0.43
SNHG20-204ENST00000566583 NCAPG2Q86XI2 1143 aa17.76■□□□□ 0.43
SNHG20-204ENST00000566583 BICD2Q8TD16 824 aa17.76■□□□□ 0.43
SNHG20-204ENST00000566583 TMEM260Q9NX78 707 aa17.76■□□□□ 0.43
SNHG20-204ENST00000566583 CYP39A1Q9NYL5 469 aa17.76■□□□□ 0.43
SNHG20-204ENST00000566583 DNAJC25-GNG10A0A024R161 153 aa17.75■□□□□ 0.43
SNHG20-204ENST00000566583 GCOM1H8Y6P7 765 aaPredicted RBP17.75■□□□□ 0.43
SNHG20-204ENST00000566583 EDIL3O43854 480 aa17.75■□□□□ 0.43
SNHG20-204ENST00000566583 CFBP00751 764 aa17.75■□□□□ 0.43
SNHG20-204ENST00000566583 POLR2MP0CAP2 368 aa17.75■□□□□ 0.43
SNHG20-204ENST00000566583 CTGFP29279 349 aa17.75■□□□□ 0.43
SNHG20-204ENST00000566583 RPS6P62753 249 aaKnown RBP17.75■□□□□ 0.43
SNHG20-204ENST00000566583 SLC30A10Q6XR72 485 aa17.75■□□□□ 0.43
SNHG20-204ENST00000566583 REXO1Q8N1G1 1221 aaKnown RBP17.75■□□□□ 0.43
SNHG20-204ENST00000566583 RASGRP4Q8TDF6 673 aa17.75■□□□□ 0.43
SNHG20-204ENST00000566583 SYTL5Q8TDW5 730 aaPredicted RBP17.75■□□□□ 0.43
SNHG20-204ENST00000566583 CRYGNQ8WXF5 182 aa17.75■□□□□ 0.43
SNHG20-204ENST00000566583 WBP1LQ9NX94 342 aa17.75■□□□□ 0.43
SNHG20-204ENST00000566583 CHMP5Q9NZZ3 219 aa17.75■□□□□ 0.43
SNHG20-204ENST00000566583 FRMPD4Q14CM0 1322 aa17.75■□□□□ 0.43
SNHG20-204ENST00000566583 F13A1P00488 732 aa17.74■□□□□ 0.43
SNHG20-204ENST00000566583 MAPK4P31152 587 aa17.74■□□□□ 0.43
SNHG20-204ENST00000566583 HOXA13P31271 388 aaPredicted RBP17.74■□□□□ 0.43
SNHG20-204ENST00000566583 NUCB2P80303 420 aa17.74■□□□□ 0.43
SNHG20-204ENST00000566583 AP3B2Q13367 1082 aa17.74■□□□□ 0.43
SNHG20-204ENST00000566583 BAATQ14032 418 aaPredicted RBP17.74■□□□□ 0.43
SNHG20-204ENST00000566583 SAFBQ15424 915 aaKnown RBP eCLIP17.74■□□□□ 0.43
SNHG20-204ENST00000566583 RNF207Q6ZRF8 634 aa17.74■□□□□ 0.43
SNHG20-204ENST00000566583 ABRAQ8N0Z2 381 aa17.74■□□□□ 0.43
SNHG20-204ENST00000566583 BIN2Q9UBW5 565 aaPredicted RBP17.74■□□□□ 0.43
SNHG20-204ENST00000566583 PFASO15067 1338 aa17.74■□□□□ 0.43
SNHG20-204ENST00000566583 RPTORQ8N122 1335 aa17.74■□□□□ 0.43
SNHG20-204ENST00000566583 FAM205CA6NFA0 338 aa17.73■□□□□ 0.43
SNHG20-204ENST00000566583 CAP1Q01518 475 aa17.73■□□□□ 0.43
SNHG20-204ENST00000566583 MAP2K1Q02750 393 aaPredicted RBP17.73■□□□□ 0.43
SNHG20-204ENST00000566583 JAKMIP3Q5VZ66 844 aa17.73■□□□□ 0.43
SNHG20-204ENST00000566583 MCTP2Q6DN12 878 aa17.73■□□□□ 0.43
SNHG20-204ENST00000566583 NSMFQ6X4W1 530 aa17.73■□□□□ 0.43
SNHG20-204ENST00000566583 GPR142Q7Z601 462 aa17.73■□□□□ 0.43
SNHG20-204ENST00000566583 FERMT3Q86UX7 667 aa17.73■□□□□ 0.43
SNHG20-204ENST00000566583 NOSTRINQ8IVI9 506 aa17.73■□□□□ 0.43
SNHG20-204ENST00000566583 FAM133AQ8N9E0 248 aa17.73■□□□□ 0.43
SNHG20-204ENST00000566583 FGD4Q96M96 766 aa17.73■□□□□ 0.43
SNHG20-204ENST00000566583 BRMS1Q9HCU9 246 aa17.73■□□□□ 0.43
SNHG20-204ENST00000566583 ASTN1O14525 1302 aa17.73■□□□□ 0.43
SNHG20-204ENST00000566583 STRNO43815 780 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 FOSP01100 380 aaPredicted RBP17.72■□□□□ 0.43
SNHG20-204ENST00000566583 PTPREP23469 700 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 LACTBP83111 547 aaPredicted RBP17.72■□□□□ 0.43
SNHG20-204ENST00000566583 GRB14Q14449 540 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 MORN1Q5T089 497 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 KRT25Q7Z3Z0 450 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 PLEKHH3Q7Z736 793 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 JMYQ8N9B5 988 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 USP6NLQ92738 828 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 ANO3Q9BYT9 981 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 FCER1AP12319 257 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 MCTP1Q6DN14 999 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 BRAPQ7Z569 592 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 PGBD1Q96JS3 809 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 PURBQ96QR8 312 aaKnown RBP17.72■□□□□ 0.43
SNHG20-204ENST00000566583 TAAR1Q96RJ0 339 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 MMP19Q99542 508 aa17.72■□□□□ 0.43
SNHG20-204ENST00000566583 ZSCAN16Q9H4T2 348 aaPredicted RBP17.72■□□□□ 0.43
SNHG20-204ENST00000566583 SLC15A5A6NIM6 579 aa17.71■□□□□ 0.42
SNHG20-204ENST00000566583 GPR25O00155 361 aa17.71■□□□□ 0.42
SNHG20-204ENST00000566583 SREBF1P36956 1147 aa17.71■□□□□ 0.42
SNHG20-204ENST00000566583 TOB1P50616 345 aaPredicted RBP17.71■□□□□ 0.42
SNHG20-204ENST00000566583 CNTN2Q02246 1040 aa17.71■□□□□ 0.42
SNHG20-204ENST00000566583 SP3Q02447 781 aa17.71■□□□□ 0.42
SNHG20-204ENST00000566583 ANKRD35Q8N283 1001 aa17.71■□□□□ 0.42
SNHG20-204ENST00000566583 GJD2Q9UKL4 321 aa17.71■□□□□ 0.42
SNHG20-204ENST00000566583 SOWAHBA6NEL2 793 aa17.7■□□□□ 0.42
SNHG20-204ENST00000566583 WNT7AO00755 349 aa17.7■□□□□ 0.42
SNHG20-204ENST00000566583 COBLO75128 1261 aa17.7■□□□□ 0.42
SNHG20-204ENST00000566583 ADORA2AP29274 412 aa17.7■□□□□ 0.42
SNHG20-204ENST00000566583 KCTD2Q14681 263 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms