RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SMCO2A6NFE2 343 aa14.51□□□□□ -0.09
SF3B3-206ENST00000565990 MEIS2O14770 477 aa14.51□□□□□ -0.09
SF3B3-206ENST00000565990 TNPO2O14787 897 aaKnown RBP14.51□□□□□ -0.09
SF3B3-206ENST00000565990 IGHA2P01877 340 aa14.51□□□□□ -0.09
SF3B3-206ENST00000565990 HOXC6P09630 235 aa14.51□□□□□ -0.09
SF3B3-206ENST00000565990 CCAR1Q8IX12 1150 aaKnown RBP14.51□□□□□ -0.09
SF3B3-206ENST00000565990 CD99L2Q8TCZ2 262 aa14.51□□□□□ -0.09
SF3B3-206ENST00000565990 MMP19Q99542 508 aa14.51□□□□□ -0.09
SF3B3-206ENST00000565990 PHF20Q9BVI0 1012 aa14.51□□□□□ -0.09
SF3B3-206ENST00000565990 GLT8D2Q9H1C3 349 aa14.51□□□□□ -0.09
SF3B3-206ENST00000565990 PSTPIP2Q9H939 334 aa14.51□□□□□ -0.09
SF3B3-206ENST00000565990 RIC8AQ9NPQ8 531 aa14.51□□□□□ -0.09
SF3B3-206ENST00000565990 A1CFQ9NQ94 594 aaKnown RBP14.51□□□□□ -0.09
SF3B3-206ENST00000565990 HOMER2Q9NSB8 354 aa14.51□□□□□ -0.09
SF3B3-206ENST00000565990 DIS3Q9Y2L1 958 aaKnown RBP14.51□□□□□ -0.09
SF3B3-206ENST00000565990 RBBP6Q7Z6E9 1792 aaKnown RBP14.51□□□□□ -0.09
SF3B3-206ENST00000565990 PFASO15067 1338 aa14.5□□□□□ -0.09
SF3B3-206ENST00000565990 M0R2N6 131 aa14.5□□□□□ -0.09
SF3B3-206ENST00000565990 COBLO75128 1261 aa14.5□□□□□ -0.09
SF3B3-206ENST00000565990 HOXD10P28358 340 aa14.5□□□□□ -0.09
SF3B3-206ENST00000565990 MRPL12P52815 198 aaKnown RBP14.5□□□□□ -0.09
SF3B3-206ENST00000565990 LBX1P52954 281 aa14.5□□□□□ -0.09
SF3B3-206ENST00000565990 RPS6P62753 249 aaKnown RBP14.5□□□□□ -0.09
SF3B3-206ENST00000565990 BAATQ14032 418 aaPredicted RBP14.5□□□□□ -0.09
SF3B3-206ENST00000565990 KCTD2Q14681 263 aa14.5□□□□□ -0.09
SF3B3-206ENST00000565990 NPY5RQ15761 445 aa14.5□□□□□ -0.09
SF3B3-206ENST00000565990 GALNT17Q6IS24 598 aa14.5□□□□□ -0.09
SF3B3-206ENST00000565990 RNF207Q6ZRF8 634 aa14.5□□□□□ -0.09
SF3B3-206ENST00000565990 FAM133AQ8N9E0 248 aa14.5□□□□□ -0.09
SF3B3-206ENST00000565990 CCDC12Q8WUD4 166 aaPredicted RBP14.5□□□□□ -0.09
SF3B3-206ENST00000565990 ALG1Q9BT22 464 aa14.5□□□□□ -0.09
SF3B3-206ENST00000565990 XRCC5P13010 732 aaKnown RBP14.49□□□□□ -0.09
SF3B3-206ENST00000565990 XBP1P17861 261 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 GJB2P29033 226 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 ADORA2AP29274 412 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 GNA11P29992 359 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 CLK2P49760 499 aaKnown RBP14.49□□□□□ -0.09
SF3B3-206ENST00000565990 NAPAP54920 295 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 PRMT2P55345 433 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 MAP2K5Q13163 448 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 IRF5Q13568 498 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 ZNF792Q3KQV3 632 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 ANKRD35Q8N283 1001 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 FBXO18Q8NFZ0 1043 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 NUDT12Q9BQG2 462 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 C6orf50Q9HD87 102 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 VPS54Q9P1Q0 977 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 SRRDQ9UH36 339 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 SMC3Q9UQE7 1217 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 IVNS1ABPQ9Y6Y0 642 aa14.49□□□□□ -0.09
SF3B3-206ENST00000565990 LOC102724159A0A0B4J2E5 919 aa14.48□□□□□ -0.09
SF3B3-206ENST00000565990 GCOM1H8Y6P7 765 aaPredicted RBP14.48□□□□□ -0.09
SF3B3-206ENST00000565990 CFBP00751 764 aa14.48□□□□□ -0.09
SF3B3-206ENST00000565990 POLR2MP0CAP2 368 aa14.48□□□□□ -0.09
SF3B3-206ENST00000565990 PWP2Q15269 919 aaKnown RBP14.48□□□□□ -0.09
SF3B3-206ENST00000565990 WDR78Q5VTH9 848 aa14.48□□□□□ -0.09
SF3B3-206ENST00000565990 ZNF467Q7Z7K2 595 aaPredicted RBP14.48□□□□□ -0.09
SF3B3-206ENST00000565990 DAGLBQ8NCG7 672 aa14.48□□□□□ -0.09
SF3B3-206ENST00000565990 CCDC148Q8NFR7 591 aa14.48□□□□□ -0.09
SF3B3-206ENST00000565990 SYTL5Q8TDW5 730 aaPredicted RBP14.48□□□□□ -0.09
SF3B3-206ENST00000565990 SOCS4Q8WXH5 440 aa14.48□□□□□ -0.09
SF3B3-206ENST00000565990 CUL5Q93034 780 aa14.48□□□□□ -0.09
SF3B3-206ENST00000565990 PRDM10Q9NQV6 1147 aa14.48□□□□□ -0.09
SF3B3-206ENST00000565990 GJB4Q9NTQ9 266 aa14.48□□□□□ -0.09
SF3B3-206ENST00000565990 GABRQQ9UN88 632 aa14.48□□□□□ -0.09
SF3B3-206ENST00000565990 SOWAHBA6NEL2 793 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 GOLGA6L3A6NEY3 463 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 ADAMTS3O15072 1205 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 PGK2P07205 417 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 CALML3P27482 149 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 FLT3LGP49771 235 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 ADCY7P51828 1080 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 KRT40Q6A162 431 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 USP17L6PQ6QN14 398 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 MAMDC4Q6UXC1 1216 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 NSMFQ6X4W1 530 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 OTOP1Q7RTM1 612 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 DPP9Q86TI2 863 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 FAM184AQ8NB25 1140 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 DNERQ8NFT8 737 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 NPLOC4Q8TAT6 608 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 FGD4Q96M96 766 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 CWC22Q9HCG8 908 aaKnown RBP14.47□□□□□ -0.09
SF3B3-206ENST00000565990 SLC5A4Q9NY91 659 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 COL20A1Q9P218 1284 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 PCDHA4Q9UN74 947 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 KCNJ14Q9UNX9 436 aa14.47□□□□□ -0.09
SF3B3-206ENST00000565990 ASTN1O14525 1302 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 GOLGA6L22H0YM25 854 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 POTEB2H3BUK9 544 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 TRAK2O60296 914 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 FOSP01100 380 aaPredicted RBP14.46□□□□□ -0.09
SF3B3-206ENST00000565990 MMP1P03956 469 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 RGS2P41220 211 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 MRE11P49959 708 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 NLRP5P59047 1200 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 NUCB2P80303 420 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 CNTN2Q02246 1040 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 PRKCZQ05513 592 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 MCTP2Q6DN12 878 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms